Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029476,075,1650AC26.0% 149.7 / 11.8 77V162G (GTG→GGG) PP_5324two‑component system response regulator
Reads supporting (aligned to +/- strand):  ref base A (10/47);  new base C (20/0);  total (30/47)
Fisher's exact test for biased strand distribution p-value = 2.04e-11
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

CAACGCCTTGATCACACATGGCTGCATGCCACTGGCCAGGCGCAGCTGGCCCTGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCAAAGGCCGGGTTGGCTCGCGCCGGGCCGATGGCCATCAGGCTGTCGAGCTTACCGATCTTGGTCAGGGCTTTCTTTACCTTGG  >  NC_002947/6075032‑6075300
                                                                                                                                     |                                                                                                                                       
cAACGCCTTGATCACACATGGCTGCATGCCACTGGCCAGGCGCAGCTGGCCCTGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCcccc                                                                                                                                       >  2:503872/1‑136 (MQ=255)
cAACGCCTTGATCACACATGGCTGCATGCCACTGGCCAGGCGCAGCTGGCCCTGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCcccc                                                                                                                                       >  1:244261/1‑136 (MQ=255)
 aaCGCCTTGATCACACATGGCTGCATGCCACTGGCCAGGCGCAGCTGGCCCTGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCt                                                                                                                                      <  1:540443/136‑1 (MQ=255)
  aCGCCTTGATCACACATGGCTGCATGCCACTGGCCAGGCGCAGCTGGCCCTGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCtt                                                                                                                                     <  1:489114/136‑1 (MQ=255)
  aCGCCTTGATCACACATGGCTGCATGCCACTGGCCAGGCGCAGCTGGCCCTAGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCtt                                                                                                                                     <  2:49293/136‑1 (MQ=255)
  aCGCCTTGATCACACATGGCTGCATCCCACTGGCCAGGCGCAGCGGGCCCGGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCtt                                                                                                                                     <  1:274028/136‑1 (MQ=255)
    gCCTTGATCACACATGGCTGCATGCCACTGGCCAGGCGCAGCTGGCCCTGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCCCGACCAAAGGCTTGGCCGGTGCCGGGGTCGGCGccccccccaagc                                                                                                                                   >  2:231559/1‑132 (MQ=255)
     ccTTGATCACACATGGCTGCATGCCACTGGCCAGGCGCAGCTGGCCCTGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCGTgcc                                                                                                                                  >  2:630168/1‑134 (MQ=255)
      cTTGATCACACATGGCTGCATGCCACTGGCCAGGCGCAGCTGGCCCTGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCCCCAAGAcc                                                                                                                                 >  1:9550/1‑136 (MQ=255)
       ttGATCACACATGGCTGCATGCCACTGGCCAGGCGCAGCTGGCCCTGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCTTGACCg                                                                                                                                <  2:330691/136‑1 (MQ=255)
           tCACACATGGCTGCATGCCACTGGCCAGGCGCAGCTGGCCCTGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCTTGACCGCTTc                                                                                                                            >  2:466918/1‑136 (MQ=255)
           tCACACATGGCGGCATCCCACTGGCCAGGCGCTGCGGGCCCTGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCTTGACCGCTTc                                                                                                                            <  1:79797/136‑1 (MQ=255)
             acacaTGGCTGCATGCCACTGGCCAGGCGCAGCTGGCCCTGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCTTGACCGCTTCgg                                                                                                                          <  1:306246/136‑1 (MQ=255)
                  tGGCTGCATGCCACTGGCCAGGCGCAGCTGGCCCTGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCTTGACCGCGTCGGGCTTg                                                                                                                     >  1:127120/1‑136 (MQ=255)
                  tGGCTGCATGCCACTGGCCAGGCGCAGCTGGCCCTGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTAGGCGCCGCCCCCGTGACCGCGTCGGGCTTg                                                                                                                     >  2:402354/1‑136 (MQ=255)
                  tGGCTGCATGCCACTGGCCAGGCGCAGCTGGCCCTGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGGGGCGGCGCCGCCCCCATGCCCGCCACGGGCGTg                                                                                                                     >  1:616415/1‑136 (MQ=255)
                   ggCTGCATGCCACTGGCCAGGCGCAGCTGGCCCTGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGc                                                                                                                    <  2:617658/136‑1 (MQ=255)
                   ggCTGCATGAAAGTGGCCTGGCGCAGCTGGCCCTGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGc                                                                                                                    <  2:75860/136‑1 (MQ=255)
                       gCATGCCACTGGCCAGGCGCAGCTGGCCCTGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTGGGGGCCGGCCCCGTGACCGCGGCGGGCTTGCCCGc                                                                                                                >  1:226738/1‑136 (MQ=255)
                       gCATGCCACTGGCCAGGCGCAGCTGGCCCTGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCATGACCGCGTCGGGCTTGccccc                                                                                                                >  1:625174/1‑134 (MQ=255)
                          tGCCACTGGCCAGGCGCAGCTGGCCCTGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGGGGCGGCGCCGCCCCCATGCCCGCTGCGGGCGAGCCCGccgg                                                                                                             >  1:405647/1‑133 (MQ=255)
                           gCCACTGGCCAGGCGCAGCTGGCCCTGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCCCCATGCCCGCTGCGGGCTTGCCCGccggc                                                                                                            >  1:483726/1‑132 (MQ=255)
                           gCCACTGGCCAGGCGCAGCTGGCCCTGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCATGACCCCGTCGGGCATGCCCGCAggc                                                                                                            >  2:583674/1‑134 (MQ=255)
                           gCCACTGGCCAGGCGCAGCTGGCCCTGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCCCCCCCGTGACCCCATCGGGCGTGCCCGcccgc                                                                                                            >  2:50581/1‑132 (MQ=255)
                            ccACTGGCCAGGCGCAGCTGGCCCTGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCCCCTAGACCCCGTCGGGCTTGCCCGccgaca                                                                                                           >  1:235062/1‑131 (MQ=255)
                            ccACTGGCCAGGCGCAGCTGGCCCTGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCa                                                                                                           <  2:343207/136‑1 (MQ=255)
                              aCTGGCCAGGCGCAGCTGGCCCTGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCCCCTTGACCGCGTCGGGCTTGCCCGCAGTCCgc                                                                                                         >  2:163344/1‑136 (MQ=255)
                              aCTGGCCAGGCGCAGCTGGCCCTGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCCCCTTGACCGCGTCGGGCTAGCCCGCAGTCAgc                                                                                                         >  2:373688/1‑136 (MQ=255)
                                tGGCCAGGCGCAGCTGGCCCTGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGGGTCGGGGCCGCCCCCTTGCCAGCATGGGGCTTGCCCGGAGTGAgcgc                                                                                                       >  2:142632/1‑136 (MQ=255)
                                  gCCAGGCGCAGCTGGCCCTGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCCCCGTGCCCGCGTCGGGCTGGCCCGCCGGCcgcgcgg                                                                                                     >  1:202851/1‑135 (MQ=255)
                                     aGGCGCAGCTGGCCCTGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTGGGCGCCGCCCCCGTGACCGCGTCGGGCGTGGCCGCAGGCAGcgcggtga                                                                                                  >  1:43961/1‑132 (MQ=255)
                                          ttgCTGGCCCTGGCAACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAg                                                                                             <  2:74252/134‑1 (MQ=255)
                                          cAGCTGGCCCTGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTGGGGGCCCCCCCCGTGACCGCGTCGGGGGTGCGCGCAGTCAGCGCGGTGAACGAg                                                                                             >  2:351297/1‑136 (MQ=255)
                                          cAGCTGGCCCTGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCCGCGCCGCCCCCGAGACCCCGTAGGGGAGGCCCCCCGGCAGCGCGGTGCACGAg                                                                                             >  2:248528/1‑136 (MQ=255)
                                          cAGCTGGCCCTGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGGGTGGGGGCCGCCCCCGTGACCGCTGCGGGCTTGCCCGCAGTGAGCGCGGTCGACGAg                                                                                             >  1:448337/1‑136 (MQ=255)
                                          cAGCTGGCCCGGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAg                                                                                             <  2:465253/136‑1 (MQ=255)
                                               ggccctggccACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCCCCGTGACCGCGTCGGGCTTGCCCGCAGTCAGCGCGGTCAACGCGTCGtt                                                                                        >  1:193511/1‑136 (MQ=255)
                                                gccctggccACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAATGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTg                                                                                       <  1:335673/136‑1 (MQ=255)
                                                gccctggccACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTg                                                                                       <  1:384131/136‑1 (MQ=255)
                                                    tggccACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCaa                                                                                   <  1:486365/136‑1 (MQ=255)
                                                    tggccACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCaa                                                                                   <  1:344588/136‑1 (MQ=255)
                                                              cGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCCCCGTGACCGCTTCGGGCGTGCCCGCAGGCAGCGCGGTGAACGAGGCGGTTGGAGAGGCCGGGtt                                                                         >  1:397905/1‑136 (MQ=255)
                                                              cGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCAAAGGCCGGGtt                                                                         <  1:329920/136‑1 (MQ=255)
                                                              cGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCTTGACCGCGTCGGGCTTGCCCGCAGTCAGCGCGTTCAACCAGGCGTTGGCAAAGGCCGGGtt                                                                         >  2:231759/1‑136 (MQ=255)
                                                              cGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGGGTCGGCGCCGCCACCGTGACCGCGTCGGGGTTGCCCGCCGTCCGCGCGGGCAACGAGTCGTTGGGTAAGGCCcgggt                                                                         >  1:439625/1‑134 (MQ=255)
                                                                   ggCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTGCGCGCCCCCCCCATTACCGCGTGGGGCTTGCCCGCCGGCAGCGCGGTACACGACTGGGTGGGAAAGGCCCGGGGGGCTc                                                                    >  2:213081/1‑136 (MQ=255)
                                                                           ggcggcAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCAAAGGCCGGGTTGGCTCGCGCCggg                                                            <  1:211684/136‑1 (MQ=255)
                                                                             gggcAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCAAAGGCCGGGTTGGCTCGCGCCGGGcc                                                          <  1:581322/135‑1 (MQ=255)
                                                                             gggcAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCAAAGGCCGGGTTGGCTCGCGCCGGGcc                                                          <  2:378726/135‑1 (MQ=255)
                                                                             cggcAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCAAAGGCCGGGTTGGCTCGCGCCGGGcc                                                          <  2:464402/136‑1 (MQ=255)
                                                                             cggcAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCAAAGGCCGGGTTGGCTCGCGCCGGGcc                                                          <  1:208664/136‑1 (MQ=255)
                                                                             cggcAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCAAAGGCCGGGTTGGCTCGCGCCGGGcc                                                          <  1:285444/136‑1 (MQ=255)
                                                                             cggcAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCAAAGGCCGGGTTGGCTCGCGCCGGGcc                                                          <  2:301072/136‑1 (MQ=255)
                                                                                  ggTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCCCCGTGGCCGCGTGGGGCGTGGCCGCAGGCAGCGCGTTGAACGAGTGGTTGGGAAAGGCCGGGTTGGCTCGCGCCGGGGCgcagg                                                     >  2:638406/1‑132 (MQ=255)
                                                                                    ggCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCGACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCAAAGGCCGGGTTGGCTCGCGCCGGGCCGATGGcc                                                   <  1:231559/135‑1 (MQ=255)
                                                                                       gggCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCAAAGGCCGGGTTGGCTCGCGCCGGGCCGATGGCCATc                                                <  2:146751/136‑1 (MQ=255)
                                                                                               cgACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCAAAGGCCGGGTTGGCTCGCGCCGGGCCGATGGCCATCAGGCTGTc                                        <  1:402354/136‑1 (MQ=255)
                                                                                                    aaaGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCTAAGGCCGGGTTGGCTCGCGCCGGGCCGATGGCCATCAGGCTGTCGAGCt                                   <  1:382667/136‑1 (MQ=255)
                                                                                                    aaaGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCAAAGGCCGGGTTGGCTCGCGCCGGGCCGATGGCCATCAGGCTGTCGAGCt                                   <  1:151699/136‑1 (MQ=255)
                                                                                                    aaaGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCAAAGGCCGGGTTGGCTCGCGCCGGGCCGATGGCCATCAGGCTGTCGAGCt                                   <  1:2304/136‑1 (MQ=255)
                                                                                                         cTTGGCCAGTGCCGGTGTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCAAAGGCCGGGTTGGCTCGCGCCGGGCCGATGGCCATCAGGCTGTCGAGCTTACCg                              <  2:531371/136‑1 (MQ=255)
                                                                                                              gcggtgccggtgTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCAAAGGCCGGGTTGGCTCGCGCCGGGCCGATGGCCATCAGGCTGTCGAGCTTACCGATCtt                         <  2:538022/135‑1 (MQ=255)
                                                                                                               cggtgccggtgTCGGCGCCGCCACCATGACCGCGGCGGGCGTGCCCGCAGGCAGCGCGGTGAACGAGTCGTTGGCAAAGGCCGGGTTGGGTCGCGCCGGGCCGCTGGGCATCAGGCTGGAGCGCGTACCGATCtgt                        >  2:128489/1‑134 (MQ=255)
                                                                                                                   gccggtgTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCAAAGGCCGGGTTGGCTCGCGCCGGGCCGATGGCCATCAGGCTGTCGAGCTTACCGATCTTGGTCa                    <  2:405647/136‑1 (MQ=255)
                                                                                                                   gccggtgTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCAAAGGCCGGGTTGGCTCGCGCCGGGCCGATGGCCATCAGGCTGTCGAGCTTACCGATCTTGGTCa                    <  2:529820/136‑1 (MQ=255)
                                                                                                                   gccggtgTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCAAAGGCCGGGTTGGCTCGCGCCGGGCCGATGGCCATCAGGCTGTCGAGCTTACCGATCTTGGTCa                    <  2:53673/136‑1 (MQ=255)
                                                                                                                   gccggtgTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCAAAGGCCGGGTTGGCTCGCGCCGGGCCGATGGCCATCAGGCTGTCGAGCTTACCGATCTTGGTCa                    <  1:522037/136‑1 (MQ=255)
                                                                                                                    gcggtgTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCAAAGGCCGGGTTGGCTCGCGCCGGGCCGATGGCCATCAGGCTGTCGAGCTTACCGATCTTGGTCAg                   <  2:578346/135‑1 (MQ=255)
                                                                                                                    ccggtgTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCAAAGGCCGGGTTGGCTCGCGCCGGGCCGATGGCCATCAGGCTGTCGAGCTTACCGATCTTGGTCAg                   <  1:208226/136‑1 (MQ=255)
                                                                                                                    ccggtgTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCAAAGGCCGGGTTGGCTCGCGCCGGGCCGATGGCCATCAGGCTGTCGAGCTTACCGATCTTGGTCAg                   <  2:454258/136‑1 (MQ=255)
                                                                                                                    ccggtgTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCAAAGGCCGGGTTGGCTCGCGCCGGGCCGATGGCCATCAGGCTGTCGAGCTTACCGATCTTGGTCAg                   <  1:273038/136‑1 (MQ=255)
                                                                                                                    ccggtgTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCAAAGGCCGGGTTGGCTCGCGCCGGGCCGATGGCCATCAGGCTGTCGAGCTTACCGATCTTGGTCAg                   <  1:299904/136‑1 (MQ=255)
                                                                                                                    ccggtgTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCAAAGGCCGGGTTGGCTCGCGCCGGGCCGATGGCCATCAGGCTGTCGAGCTTACCGATCTTGGTCAg                   <  2:608736/136‑1 (MQ=255)
                                                                                                                    ccggtgTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCAAAGGCCGGGTTGGCTCGCGCCGGGCCGATGGCCATCAGGCTGTCGAGCTTACCGATCTTGGTCAg                   <  1:594077/136‑1 (MQ=255)
                                                                                                                    ccggtgTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCAAAGGCCGGGTTGGCTCGCGCCGGGCCGATGGCCATCAGGCTGTCGAGCTTACCGATCTTGGTCAg                   <  2:556376/136‑1 (MQ=255)
                                                                                                                              cgccgcCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCAAAGGCCGGGTTGGCTCGCGCCGGGCCGATGGCCATCAGGCTGTCGAGCTTACCGATCTTGGTCAGGGctttcttt         <  1:637353/136‑1 (MQ=255)
                                                                                                                               gccgccACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCAAAGGCCGGGTTGGCTCGCGCCGGGCCGATGGCCATCAGGCTGTCGAGCTTACCGATCTTGGTCAGGGctttctttt        >  2:160771/1‑135 (MQ=255)
                                                                                                                               gccgccACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCAAAGGCCGGGTTGGCTCGCGCCGGGCCGATGGCCATCAGGCTGTCGAGCTTACCGATCTTGGTCAGGGCTTTCTTTa        <  2:616415/136‑1 (MQ=255)
                                                                                                                               gccgccACCATGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGGTCAACGAGTCGTTGGGCAAGGCCGGGTTGGGTCGCGCCGGGCCGCTGGCCCTCAGGCTGTCGAGCTTACCGATCTTGGTGAGGGcgttctttt        >  2:598520/1‑135 (MQ=255)
                                                                                                                                   ccACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCAAAGGCCGGGTTGGCTCGCGCCGGGCCGATGGCCATCAGGCTGTCGAGCTTACCGATCTTGGTCAGGGCTTTCTTTACCtt    <  2:142772/136‑1 (MQ=255)
                                                                                                                                     aCCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCATAGGCCGGGTTGGCTCGCGCCGGGCCGATGGCCATCAGGCTGTCGAGCTTACCGCGCTTGGTCAGGGCTGTCTTTACCTTgg  >  2:26432/1‑136 (MQ=255)
                                                                                                                                     |                                                                                                                                       
CAACGCCTTGATCACACATGGCTGCATGCCACTGGCCAGGCGCAGCTGGCCCTGGCCACGGCCGCTCGGCGCGGGGGCGGCAGGTGCGGGCGCCGCGACCAAAGGCTTGGCCGGTGCCGGTGTCGGCGCCGCCACCTTGACCGCTTCGGGCTTGCCCGCAGTCAGCGCGTTCAACGAGTCGTTGGCAAAGGCCGGGTTGGCTCGCGCCGGGCCGATGGCCATCAGGCTGTCGAGCTTACCGATCTTGGTCAGGGCTTTCTTTACCTTGG  >  NC_002947/6075032‑6075300

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑