Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	1743400	1743451	52	2 [1]	[1] 2	PP_1532	putative Phage integrase

CGGTCACGGGCCGCGGCGAACTCTTTGCTGATTGTGTCGAGCATGATGGGAGATCCCGCCTTCGCGCGGCTGATTGTCCGGTGGTGGTGCACCAGGTGCTTTGACAGCACCCGATCGCGGCAACGCCGTATCACTTCA  >  NC_002947/1743264‑1743401                                                                                                                                        |   cGGTCACCGGACGCGGCGAACTCTTAGCTGATTGTGTCGAGCATGATGGGAGATCCCGCCTTCGCGCGGCTGATTGTCCGGTGGTGGTGCACCAGGTGCTTTGACAGCACCCGATCGCGGCAACGCCGTATCACtt    >  2:4597/1‑136 (MQ=255)   gTCACGGGCCGCGGCGAACTCTTTGCTGATTGTGTCGAGCATGATGGGAGATCCCGCCTTCGCGCGGCTGATTGTCCGGTGGTGGTGCACCAGGTGCTTTGACAGCACCCGATCGCGGCAACGCCGTATCACTTCa  <  2:236391/136‑1 (MQ=255)                                                                                                                                        |   CGGTCACGGGCCGCGGCGAACTCTTTGCTGATTGTGTCGAGCATGATGGGAGATCCCGCCTTCGCGCGGCTGATTGTCCGGTGGTGGTGCACCAGGTGCTTTGACAGCACCCGATCGCGGCAACGCCGTATCACTTCA  >  NC_002947/1743264‑1743401

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑