Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	5491825	5491926	102	2 [1]	[1] 3	PP_4824	two‑component system sensor histidine kinase/response regulator

CTCAGCTCTGATCGTCAGCTTGCTGACCCTGCTCTGCATGTTTCCGGCTGCGGCCGAACATGACGGTGGCTGGACCGTTCTGCTCGACGAACAGGCCAACCTGCAACTGAGCGATGTGCGCTCCGAGCGCTATCGCAACCAGTTCAGCCCACTGCCTCTCGCCGACCTTGATGCTGCCCCGGCTGG  >  NC_002947/5491689‑5491874                                                                                                                                        |                                                   cTCAGCTCTGATCGTCAGCTTGCTGACCCTGCTCTGCATGTTTCCGGCTGCGGCCGAACATGACGGTGGCTGGACCGTTCTGCTCGACGAACAGGCCAACCTGCAACTGAGCGATGTGCGCTCCGAGCGCTATCGc                                                    <  2:142991/136‑1 (MQ=255)                                                   cGGCCGAACATGACGGTGGCTGGACCGTTCTGCTCGACGAACAGGCCAACCTGCAACTGAGCGATGTGCGCTCCGAGCGCTATCGCAACCAGTTCAGCCCACTGCCTCTCGCCGACCTTGATGCTGCCCCGGCttg  <  1:39908/136‑3 (MQ=255)                                                                                                                                        |                                                   CTCAGCTCTGATCGTCAGCTTGCTGACCCTGCTCTGCATGTTTCCGGCTGCGGCCGAACATGACGGTGGCTGGACCGTTCTGCTCGACGAACAGGCCAACCTGCAACTGAGCGATGTGCGCTCCGAGCGCTATCGCAACCAGTTCAGCCCACTGCCTCTCGCCGACCTTGATGCTGCCCCGGCTGG  >  NC_002947/5491689‑5491874

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑