Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	552199	552269	71	2 [1]	[1] 3	rplD	50S ribosomal protein L4

TCACTGTCTCGGCCGTGAAGAAATTCGAGGAGCTGCTGGGATGAACCAGGAACGCGTATTCAAAGTCCTCCTTGGCCCGCACGTTTCCGAGAAGGCTACCGTTCTGGCTGAGAAAAAAGGCCAGTTCGTATTCAAGGTTGCTA  >  NC_002947/552263‑552405        |                                                                                                                                        tCACTGTCTCGGCCGTGAAGAAATTCGAGGAGCTGCTGGGATGAACCAGGAACGCGTATTCAAAGTCCTCCTTGGCCCGCACGTTTCCGAGAAGGCTACCGTTCTGGCTGAGAAAAAAGGCCAGTTCGTATTCAAg         >  2:283495/1‑136 (MQ=255)        ctcGGCCGTGAAGAAATTCGAGGAGCTTCTGGGATGAACCAGGAACGCGTATTCAAAGTCCTCCTTGGCCCGCACGTTTCCGAGAAGGCTACCGTTCTGGCTGAGAAAAAAGGCCAGTTCGTATTCAAGGTTGCTa  >  2:55942/1‑136 (MQ=255)        ctcGGCCGTGAAGAAATTCGAGGAGCTGCTGGGATGAACCAGGAACGCGTATTCAAAGTCCTCCTTGGCCCGCACGTTTCCGAGAAGGCTACCGTTCTGGCTGAGAAAAAAGGCCAGTTCGTATTCAAGGTTGCTa  >  2:272535/1‑136 (MQ=255)        |                                                                                                                                        TCACTGTCTCGGCCGTGAAGAAATTCGAGGAGCTGCTGGGATGAACCAGGAACGCGTATTCAAAGTCCTCCTTGGCCCGCACGTTTCCGAGAAGGCTACCGTTCTGGCTGAGAAAAAAGGCCAGTTCGTATTCAAGGTTGCTA  >  NC_002947/552263‑552405

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑