Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	3877801	3877809	9	2 [1]	[0] 2	PP_3421	sensor histidine kinase

GGTGGTAAAGAACGGTCGAAAAGCCATACGCTGCTGCTCTTCGTTCATGCCCTTGCCATTGTCGGACAGGCGCAAAGTCAGGCTGCGCCGGTTGTGACGTACCACCTCGATACGCAACCGCCCGCCCTGCTCCATC  >  NC_002947/3877810‑3877945 |                                                                                                                                        ggtggtAAAGAACGGTCGAAAAGCCATACGCTGCTGCTCTTCGTTCATGCCCTTGCCATTGTCGGACAGGCGCAAAGTCAGGCTGCGCCGGTTGTGACGTACCACCTCGATACGCAACCGCCCGCCCTGCTCCATc  >  1:259227/1‑136 (MQ=255) ggtggtAAAGAACGGTCGAAAAGCCATACGCTGCTGCTCTTCGTTCATGCCCTTGCCATTGTCGGACAGGCGCAAAGTCAGGCTGCGCCGGTTGTGACGTACCACCTCGATACGCAACCGCCCGCCCTGCTCCATc  >  1:3209/1‑136 (MQ=255) |                                                                                                                                        GGTGGTAAAGAACGGTCGAAAAGCCATACGCTGCTGCTCTTCGTTCATGCCCTTGCCATTGTCGGACAGGCGCAAAGTCAGGCTGCGCCGGTTGTGACGTACCACCTCGATACGCAACCGCCCGCCCTGCTCCATC  >  NC_002947/3877810‑3877945

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑