Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	4940750	4940767	18	3 [1]	[1] 2	flhA	flagellar export pore protein

TCAGAGCCTGAAGCACGGGTGACCATGATCGCGGCGGCGGTGGACAGCAGCAGTGATGGCAATTGCGCCACCAAACCGTCACCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATG  >  NC_002947/4940760‑4940903         |                                                                                                                                        tCAGAGCCTGAAGCACGGGTGACCATGATCGCGGCGGCGGTGGACAGCAGCAGTGATGGCAATTGCGCCACCAAACCGTCACCGATGCTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGtgct          >  2:174081/1‑136 (MQ=255)         tGAAGCACGGGTGACCATGATCGCGGCGGCGGTGGACAGCAGCAGTGATGGCAATTGCGCCACCAAACCGTCACCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATg  <  1:179722/136‑1 (MQ=255)         |                                                                                                                                        TCAGAGCCTGAAGCACGGGTGACCATGATCGCGGCGGCGGTGGACAGCAGCAGTGATGGCAATTGCGCCACCAAACCGTCACCGATGGTCAGCAGGGCATAGACCTTGCCGGCCTCGCTGAACGACATATTGTGCTGCAGCATG  >  NC_002947/4940760‑4940903

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑