Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	4986540	4986557	18	2 [0]	[1] 2	flgE	flagellar hook protein FlgE

GCCGTCCTCGCCGACCGCATAACCCTGCAGGTTGGCACCCGAAGCATTCACCACATAACCGGCCTTGTCGCTGTAGAAAGCGCCCGCACGGGTGTAGATCTTCGAGCCGTTGTCGTTCAGGGCAAAGAAGCCGTTGCCATCGAT  >  NC_002947/4986550‑4986693         |                                                                                                                                        gCCGTCCTCGCCGACCGCATAACCCTGCAGGTTGGCACCCGAAGCATTCACCACATAACCGGCCTTGTCGCTGTAGAAAGCGCCCGCACGGGTGTAGATCTTCGAGCCGTTGTCGTTCAGGGCAAAGAAGCCGTTg          >  1:162698/1‑136 (MQ=255)         cGCCGACCGCATAACCCTGCAGGTTGGCACCCGAAGCATTCACCACATAACCGGCCTTGTCGCTGTAGAAAGCGCCCGCACGGGTGTAGATCTTCGAGCCGTTGTCGTTCAGGGCAAAGAAGCCGTTGCCATCGAt  >  1:53074/1‑136 (MQ=255)         |                                                                                                                                        GCCGTCCTCGCCGACCGCATAACCCTGCAGGTTGGCACCCGAAGCATTCACCACATAACCGGCCTTGTCGCTGTAGAAAGCGCCCGCACGGGTGTAGATCTTCGAGCCGTTGTCGTTCAGGGCAAAGAAGCCGTTGCCATCGAT  >  NC_002947/4986550‑4986693

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑