| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 955,085:1 | +G | 5.5% | intergenic (+36/‑277) | cyoE → / → alaC | protoheme IX farnesyltransferase/aminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 955,085 | 1 | . | G | 5.5% | 1941.5 / 101.1 | 454 | intergenic (+36/‑277) | cyoE/alaC | protoheme IX farnesyltransferase/aminotransferase |
| Reads supporting (aligned to +/- strand): ref base . (114/315); new base G (4/21); total (118/336) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.48e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.54e-01 | |||||||||||
Only 100 of 459 total aligned reads displayed.
AAGTGGGCCCGCAAGGTGTTCGGCTTCTCCATCCTCACCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCT > NC_002947/954936‑955231 | cccGCAAGGTGTTCGGCTTCTCCATCCTCACCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCgggg < 2:5749426/150‑1 (MQ=255) cccGCAAGGTGTTCGGCTTCTCCATCCTCACCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCgggg > 1:1834630/1‑150 (MQ=255) cccGCAAGGTGTTCGGCTTCTCCATCCTCACCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCgggg > 1:4020846/1‑150 (MQ=255) cccGCAAGGTGTTCGGCTTCTCCATCCTCACCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCgggg < 1:8553212/150‑1 (MQ=255) ccGCAAGGTGTTCGGCTTCTCCATCCTCACCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑t > 1:6626132/1‑150 (MQ=255) ccGCAAGGTGTTCGGCTTCTCCATCCTCACCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑t > 2:7189641/1‑150 (MQ=255) gCAAGGTGTTCGGCTTCTCCATCCTCACCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑Gc > 2:1441498/1‑142 (MQ=255) gCAAGGTGTTCGGCTTCTCCATCCTCACCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGG‑CACAGTGGCCGGGG‑‑‑ttt < 2:6070504/150‑1 (MQ=255) gCAAGGTGTTCGGCTTCTCCATCCTCACCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGG‑CACAGTGGCCGGGG‑‑‑ttt < 2:3493760/150‑1 (MQ=255) cagggggtCGGCGTCTCCAGCCCCACCGCCACTGCCCTGAGCGTGATGAGGGGTGTGGACAGCCAGACCGCAGCGGATGGGCTGATGACCTACGCACGCTGAAACTGCGGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑ttttt < 2:8190528/143‑1 (MQ=255) aaGGTGTTCGGCTTCTCCATCCTCACCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGG‑CACAGTGGCCGGGG‑‑‑ttttc < 2:3571766/150‑2 (MQ=255) aaGGTGTTCGGCTTCTCCATCCTCACCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGG‑CACAGTGGCCGGGG‑‑‑ttttc < 1:4587246/150‑2 (MQ=255) aGGTGTTCGGCTTCTCCATCCTCACCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑tttttt < 1:6306033/150‑1 (MQ=255) tgtTCGGCTTCTCCATCCTCACCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑ttttttttt > 2:3821820/1‑150 (MQ=255) tgtTCGGCTTCTCCATCCTCACCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGG‑CACAGTGGCCGGGG‑‑‑ttttcgtga < 1:7960929/150‑6 (MQ=255) tgtTCGGCTTCTCCATCCTCACCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGG‑CACAGTGGCCGGGG‑‑‑ttttcgtga < 2:4570832/150‑6 (MQ=255) tgtTCGGCTTCTCCATCCTCACCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGG‑CACAGTGGCCGGGG‑‑‑ttttcgtga < 2:6333152/150‑6 (MQ=255) gtTCGGCTTCTCCATCCTCACCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTg < 1:4860362/150‑1 (MQ=255) gtTCGGCTTCTCCATCCTCACCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTg < 2:7954120/150‑1 (MQ=255) gtTCGGCTTCTCCATCCTCACCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTg < 2:6877416/150‑1 (MQ=255) gtTCGGCTTCTCCATCCTCACCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTg < 2:6672182/150‑1 (MQ=255) gtTCGGCTTCGCCACCCTCACCGTCACTGCCCGGAGCGTGATGATGGGTGTGGACCGCCAGACCGCTGCGGATGTGCTGATGACCTACGCCCGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑ttttttttgg < 2:7587230/150‑3 (MQ=255) ttCGGCTTCTCCATCCTCACCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTgg < 2:1634543/150‑1 (MQ=255) ttCGGCTTCTCCATCCTCACCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTgg < 1:2709089/150‑1 (MQ=255) ttCGGCTTCTCCATCCTCACCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTgg < 2:4321445/150‑1 (MQ=255) tCGGCTTCTCCATCCTCACCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTgggg < 1:7884361/150‑1 (MQ=255) tCGGCTTCTCCATCCTCACCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTggg < 1:4655285/150‑1 (MQ=255) gCTTCTCCATCCTCACCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGt > 1:6981406/1‑150 (MQ=255) gCTTCTCCATCCTCACCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGt > 1:8750007/1‑150 (MQ=255) gCTTCTCCATCCTCACCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGt < 2:7290951/150‑1 (MQ=255) ttCTCCATCCTCACCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTAt > 1:5133727/1‑150 (MQ=255) aTCCTCACCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCGGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGT‑‑TTTTTTTTTGGGGGTATTTTTc < 1:5678494/150‑1 (MQ=255) tCCTCACCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGT‑‑TTTTTTTTTGGGGGTATTTTTcc < 2:2614819/150‑1 (MQ=255) cTCACCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTATCACGAAAACCCCGGCCAATGT‑GCCGGGG‑‑‑TTATTTTTTGGGGGTATTCTTCCtgt > 1:6500984/1‑150 (MQ=255) tCACCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCtgtg > 1:5927964/1‑150 (MQ=255) aCCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGcc > 2:5572258/1‑150 (MQ=255) gTCACTGCCCTGAGCGTGTTGTTGGGTGTGGACAGCCAGACCGCTGCGGTTTTGCTGATGACCTACGCACGCTGAAACTGCTGCCTTTTTAACGAAAACCCCGGCCACTGT‑GCCGGGGTTTTTTTTTTTTGGGGGTATTTTTCCTGTGcc < 2:2280222/150‑1 (MQ=255) gTCACTGCCCTGAGCGTGTTGATGGGTGTGGACTGCGAGACCGCTGCGGCTGTGCTGTTGACCTACGCACGCTGAAACTGGTGCCTGTTTCACGAAATGCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTGTTCCTGTGCCggg < 2:6500984/150‑2 (MQ=255) ccTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTcgc < 1:3358062/150‑1 (MQ=255) tGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTAGC‑gg > 1:8184307/1‑150 (MQ=255) gAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑ggg < 2:2926484/150‑1 (MQ=255) gAGCGTGATGAGGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑ggg < 2:4871445/150‑1 (MQ=255) cGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCCCTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCGTCGC‑GGGTaa > 1:2559593/1‑150 (MQ=255) tgatgaTGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAAc < 2:3282308/150‑1 (MQ=255) gatgatGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCggg > 2:6417509/1‑100 (MQ=255) gatgatGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCggg < 1:6417509/100‑1 (MQ=255) gatgatGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGtttacc < 2:5188530/150‑6 (MQ=255) gatgGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGc < 2:3052614/150‑1 (MQ=255) tgGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTc < 2:4026639/150‑1 (MQ=255) gggTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTcc < 1:1023013/150‑1 (MQ=255) gtgtGGACAGCCAGACCGCTGCGGATGTGCTGATGACCCACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTa < 2:8140098/150‑1 (MQ=255) gtgtGGACAGCCAGACCGCTGCGGATGTGCTGATGACCCACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTa < 2:2025009/150‑1 (MQ=255) tgGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACaa < 1:3545394/150‑1 (MQ=255) ggACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTACACCCGCTCCTACAAg < 1:2247044/150‑1 (MQ=255) ggACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAg < 1:4364518/150‑1 (MQ=255) ggACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAg < 2:6603035/150‑1 (MQ=255) aCAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGCAAACCCGCTCCTACAAGGt > 2:2738402/1‑150 (MQ=255) aGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACaggaacc < 1:387864/150‑7 (MQ=255) aGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACaggaacc < 1:553546/150‑7 (MQ=255) ccAGACCGCTGCGGATGTGCTGATGACCTTCGCTCGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCt < 2:4413610/150‑1 (MQ=255) ccAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCt < 2:8602627/150‑1 (MQ=255) gACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTa < 1:6164073/150‑1 (MQ=255) aCCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAg < 1:320048/150‑1 (MQ=255) aCCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCGCCGACAAGGTTCCGGTAg > 2:4257158/1‑150 (MQ=255) gCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCt > 1:831353/1‑143 (MQ=255) gCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCt < 2:831353/143‑1 (MQ=255) cTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAGGAACCTTGTAGGAGc < 1:7523382/150‑1 (MQ=38) cTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAGGAACCTTGTAGGAGc < 2:505560/150‑1 (MQ=38) cTGCGGATGTGCTGATGACCTACGCACGATGAAACTGCTGCCTGTTTCAAGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAGc < 1:900009/150‑1 (MQ=255) tGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGT‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAGGAACCTTGTAGGAGc < 1:7252493/150‑1 (MQ=37) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAGGAACCTTGTAGGAGCgg < 2:5992223/150‑1 (MQ=38) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAGGAACCTTGTAGGAGCgg < 2:1287489/150‑1 (MQ=38) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAGCgg < 1:3685086/150‑1 (MQ=255) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAGCgg < 2:7020658/150‑1 (MQ=255) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAGCgg < 1:6721747/150‑1 (MQ=255) cGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAGGAACCTTGTAGGAGCggg < 2:7888289/150‑1 (MQ=38) cGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAGCggg < 1:5629568/150‑1 (MQ=255) cGGATGTGCTGATGACCGACGCACGCTGAAACTGCGGCCTGTTTCACGAAAACCCCGGCCACGGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTCTTTTGCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACCGGAACCTTGTAGGAGCggg < 2:8787656/150‑1 (MQ=25) ggATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAGGAACCTTGTAGGAGCGGGt < 2:751066/150‑1 (MQ=37) aTGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAGCGGGttt < 1:5301029/150‑1 (MQ=255) tgtgCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTa < 2:1776859/150‑1 (MQ=255) tgtgCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTa < 2:7795629/150‑1 (MQ=255) gtgCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTAc < 2:4469870/150‑1 (MQ=255) gCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGGT‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTAcc < 1:4953000/150‑1 (MQ=255) aCCTACGCACGCGGAAACTGCTGCCTGTTTCACGAAACCCCCGGCCAGTGT‑GCGGGGT‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGG‑GGTTAAACCCGCTCCTACACGGTTCCTGTTGGAGGGGGTTTACCCGCGAaga < 2:2388534/150‑1 (MQ=255) ccTACGCACGCTTAAACTGCTGCCTTTTTAACGAAAACCCCGGCCACTGT‑GCCGGGT‑‑‑TTTTTTTTTGGGGTTTTTTTTCCTGTGCGGGCCTCTTCGC‑GGGTAAACCCGCTCCTACATGGTTCCTGTAGGTGGGGTTTTACCCGCGAagag < 2:3702881/150‑1 (MQ=37) cTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCCCGCCTACAAGGTTGCTGGTGGGGGGGGGTTTCCCGCGAAgggg > 1:2105776/1‑150 (MQ=255) tACGCACGCTGAACCTGCGGCCTTTTTCACGAAACCCCCGGCCACTGT‑GCCGGGT‑‑‑TTTTTTTTTGGGGGTTTTTTGCCTGGGCCGGCCTCTCCGC‑GGGTAAACCGGCTCCTACCGGAACCTTGTTGGAGGGGGTTTACCCGCGAAGAGGc < 2:6278127/150‑1 (MQ=18) cgcacgcTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGGAAAACCGCTCCGACAAGGGTCGGGGAGGGGCGGGGTTAACCGCGGAGAgggcc > 1:1306187/1‑147 (MQ=255) gcTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTTAACCCGCTCCTACAGGAACCTTGTTGGAGCggg < 1:1729125/126‑1 (MQ=25) cTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTTATACCGCGCCAACAAGGGTGCGGGGGGAGCGGGGGTACCCGCGCAGAGGCCAGcccac > 1:4176374/1‑149 (MQ=255) aCTGCTGCCTGTGACACGAACACCCCGGCCACTGT‑GCCGGGG‑‑‑TATTTTTTGGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAACCCCGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGaaaaa < 2:5390547/150‑1 (MQ=37) tttCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTc < 2:5630411/96‑1 (MQ=255) aaaCCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTTAAACCGCACCAACAAAGTTGGGGGTGGTGCCGGTTTTACCGCGGAGAGGGCACCACCGCAAAATAAAAATAACTgttattaa > 2:1069733/1‑143 (MQ=255) aaaCCCCGG‑CACAGTGGCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCt < 1:2981999/76‑1 (MQ=25) aaCCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCTGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAGGAACCTTGTAGGAGCgg < 1:7609639/99‑1 (MQ=18) aaCCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTTAAACCGCTCCTACAAGGTTCCGGTTGGAGCGGGGTTACCCGCGGAGAGGCCAGCACAGCAAAATAAAAATAACGGGTTTTGaa > 2:4753093/1‑150 (MQ=38) aCCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCaaa > 2:6518240/1‑150 (MQ=255) ccGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGGTAAACCC‑CGACGACAACGGTGCGGTGGGAGCCGGGTTTCCCCCGCAGAGGCCCCCCCAGAAAAAAAAAAATACCAGATTTTAaaaaaa > 1:7132738/1‑150 (MQ=255) ccGGCCACTGG‑GCCGGGC‑‑‑TTTTATTTTGGGGGTATTTTTCCGGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCaaaaaa < 2:8552955/150‑1 (MQ=255) | AAGTGGGCCCGCAAGGTGTTCGGCTTCTCCATCCTCACCGTCACTGCCCTGAGCGTGATGATGGGTGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGT‑GCCGGGG‑‑‑TTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGC‑GGGTAAACCCGCTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCT > NC_002947/954936‑955231 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |