| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2508640 | 354 (0.940) | 19 (0.050) | 10/266 | NT | 5.4% | intergenic (+7/‑226) | speB/PP_2197 | agmatinase/hypothetical protein |
| ? | NC_002947 | = 2508730 | 324 (0.890) | intergenic (+97/‑136) | speB/PP_2197 | agmatinase/hypothetical protein | |||||
CGTGGCATCAACCTGGTAGGCATGGACTTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2508487‑2508640‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttgcAGCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATGGCCGCAAAATCTACTGGCCGTTGTCCACCTTGTGCCGCGCCGCATACAGGCACAGCATCTCC < NC_002947/2508730‑2508582 CGTGGCATCAACCTGGTAGGCATGGACTTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATT > 2:3813407/1‑150 GTGGCATCAACCTGGTAGGCATGGACTTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTT > 2:6785028/1‑150 GTGGCATCAACCTGGTAGGCATGGACTTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTT > 1:4473038/1‑150 GTGGCATCAACCTGGTAGGCATGGACTTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTT > 1:4667290/1‑150 GTGGCATCAACCTGGTAGGCATGGACTTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTT < 1:4875189/150‑1 GTGGCATCAACCTGGTAGGCATGGACTTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTT > 1:5663703/1‑150 TGGCATCAACCTGGTAGGCATGGACTTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTT > 1:826785/1‑150 GGCATCAACCTGGTAGGCATGGACTTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTG > 1:3966383/1‑150 GGCATCAACCTGGTAGGCATGGACTTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTG > 2:7474430/1‑150 GCATCAACCTGGTAGGCATGGACTTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGC > 2:3618051/1‑150 GCATCAACCTGGTAGGCATGGACTTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGC < 2:5296313/150‑1 GCATCAACCTGGTAGGCATGGACTTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGC < 2:5327041/150‑1 GCATCAACCTGGTAGGCATGGACTTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGC < 2:6424965/150‑1 GCATCAACCTGGTAGGCATGGACTTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGC < 2:7993587/150‑1 TGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCATTCGCGGGCGCGCCCGCTC < 1:8220746/150‑1 TGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCATTCGCGGGCGCGCCCGCTC < 1:8221006/150‑1 TGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCAGCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTG < 2:1145591/150‑1 CGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCAGCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGG < 1:8162492/150‑1 ACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACACGGTGGACAACGGCCAGTAGATTTTGCAGCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCC < 1:5487204/150‑1 ACCCTGGCCATGGAGATGCGGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCAGCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCC < 1:5487386/150‑1 TGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGA < 2:656863/150‑1 TGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGA < 2:656808/150‑1 TGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCAGCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGA < 1:5525136/150‑1 GCCTTGGAGATGCTGTGCCTGTATGCGGCGCGGAACAAGGTGGACAACGGCCAGTAGATTTTGCAGCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAAT < 1:3141134/150‑1 GCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACACGGTGGACAACGGCCATTAGATTTTGCAGCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAAT < 1:126036/150‑1 GCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAAT < 1:2127385/150‑1 GCCATGGAGATGCTGGGCCTGTAGGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCAGCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAAT < 1:7601951/150‑1 CCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTGGATTTTGCGGCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATG < 1:4016124/150‑1 CCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCGGCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATG < 1:7407171/150‑1 GCTGTGCCTGTATGCGGCGCGGCACATGGTGGACAACGGCCAGTTGTTTTTGCCGCCATTGGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATGGCCGCAAAAT < 2:4665079/150‑1 GCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGCAGCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATGGCCGCAAAAT < 2:3504544/150‑1 gGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCATTAGATTTTGCAGCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATGGCCGCAAAATCTAC < 2:7664106/149‑1 CGGCGCGGCACACGGTGGACAACGGCCAGTAGATTTTGCAGCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATGGCCGCAAAATCTACTGGCCGTTGT < 2:6062942/150‑1 TTTGCAGCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATGGCCGCAAAATCTACTGGCCGTTGTCCACCTTGTGCCGCGCCGCATACAGGCACAGCAT > 2:8771309/1‑150 TTTGCAGCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATGGCCGCAAAATCTACTGGCCGTTGTCCACCTTGTGCCGCGCCGCATACAGGCACAGCAT < 1:6978887/150‑1 TTGCAGCCATTCGCGGGCGCGCCCGCTCCCCGGTCACCCACAGAATTCTGGCCCAGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAAAGGCCGCAAAAAATAATTGCCCTTGTCCACCATGTTCCCCGCCGCATACAGGCACACCATC > 1:6665170/1‑150 TTGCAGCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAAAATCTACTGGCCGTTGTCCACCTTGTGCCGCGCCGCCTACAGGCACAGCATC > 2:7616135/1‑150 TTGCAGCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGGGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATGGCCGCAAAATCTACTGGCCGTTGTCCACCTTGTGCCGCGCCGCATACAGGCACAGCATC > 2:7616117/1‑150 TGCAGCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTATGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGCATGGCCGCAAAATCTACTGGCCGTTGTCCACCTTGTGCCGCGCCGCCTACAGGCACAGCATCT > 1:3408868/1‑150 GCAGCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATGGCCGCAAAATCTACTGGCCGTTGTCCACCTTGTGCCGCGCCGCATACAGGCACAGCATCTC < 1:4418041/150‑1 GCAGCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATGGCCGCAAAATCTACTGGCCGTTGTCCACCTTGTGCCGCGCCGCATACAGGCACAGCATCTC < 2:1047461/150‑1 GCAGCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACACATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATGGCCGCAAAATATACTGGCCGTTGTCCACCTTGTGCCGCGCCGCATACAGGCACAGCATCac > 2:408318/1‑148 CAGCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATGGCCGCAAAATCTACAGGCCGTTGTCCACCTTGTGCCGCGCCGCATACAGGCACAGCAACTCC > 1:6556925/1‑150 CGTGGCATCAACCTGGTAGGCATGGACTTGGTGGAAGTGGCGCCAGCCTATGACCATGCCGATATCACCGCGTTGGCCGGGGCAACCCTGGCCATGGAGATGCTGTGCCTGTATGCGGCGCGGCACAAGGTGGACAACGGCCAGTAGATTTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2508487‑2508640‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttgcAGCCATTCGCGGGCGCGCCCGCTCCACGGTCACCCACAGATTTCTGGCCCTGTGAGACACGTGTGGGAGCGGGCTTGCCCGCGAATGGCCGCAAAATCTACTGGCCGTTGTCCACCTTGTGCCGCGCCGCATACAGGCACAGCATCTCC < NC_002947/2508730‑2508582 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |