New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4962558 =261 (0.690)41 (0.110) 26/270 NT 13.8% intergenic (‑47/+116) fliH/fliG flagellar assembly protein FliH/flagellar motor switch protein
?NC_002947 5227928 = NA (NA)intergenic (‑342/+37) PP_4602/PP_4603 AraC family transcriptional regulator/transposase

GTGCTCGGCGGCAAGGGCGCCGAGGAAATGATCTAAGGTATTCGCGATCCCATAGCCGACGCCGCCTTTTGTAGGAGCGGGTTTACCCGCGAAGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4962709‑4962558
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCGAAGCAAAGCCCGGACCTGCCGGTCTTGGCTTCTGGTTTCGAACTCCTCAAGACCTTGTTCAACATAA  >  NC_002947/5227928‑5228073
                                                                                                                                                                                                                                                                                                          
GTGCTCGGCGGCAAGGGCGCCGAGGAAATGATCTAAGGTATTCGCGATCCCATAGCCGACGCCGCCTTTTGTAGGAGCGGGTTTACCCGCGAAGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGC                                                                                                                                                      >  1:6053092/1‑150
GTGCTCGGCGGCAAGGGCGCCGAGGAAATGATCTAAGGTATTCGCGATCCCATAGCCGACGCCGCCTTTTGTAGGAGCGGGTTTACCCGCGAAGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGC                                                                                                                                                      <  2:2513503/150‑1
GTGCTCGGCGGCAAGGGCGCCGAGGAAATGATCTAAGGTATTCGCGATCCCATAGCCGACGCCGCCTTTTGTAGGAGCGGGTTTACCCGCGAAGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGC                                                                                                                                                      <  1:2730057/150‑1
 TGCTCGGCGGCAAGGGCGCCGAGGAAATGATCTAAGGTATTCGCGATCCCATAGCCGACGCCGCCTTTTGTAGGAGCGGGTTTACCCGCGAAGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCT                                                                                                                                                     <  1:1672159/150‑1
  GCTCGGCGGCAAGGGCGCCGAGGAAATGATCTAAGGTATTCGCGATCCCATAGCCGACGCCGCCTTTTGTAGGAGCGGGTTTACCCGCGAAGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTC                                                                                                                                                    <  2:5401974/150‑1
   CTCGGCGGCAAGGGCGCCGAGGAAATGATCTAAGGTATTCGCGATCCCATAGCCGACGCCGCCTTTTGTAGGAGCGGGTTTACCCGCGAAGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTTCACCCGCgaa                                                                                                                                                   <  2:783672/150‑4
    TCGGCGGCAAGGGCGCCGAGGAAATGATCTAAGGTATTCGCGATCCCATAGCCGACGCCGCCTTTTGTAGGAGCGGGTTTACCCGCGAAGGCGTCGGTCCTGGCACTCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTCTC                                                                                                                                                  >  1:912433/1‑150
    TCGGCGGCAAGGGCGCCGAGGAAATGATCTAAGGTATTCGCGATCCCATAGCCGACGCCGCCTTTTGTAGGAGCGGGTTTACCCGCGAAGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTCTC                                                                                                                                                  >  1:2241839/1‑150
    TCGGCGGCAAGGGCGCCGAGGAAATGATCTAAGGTATTCGCGATCCCATAGCCGACGCCGCCTTTTGTAGGAGCGGGTTTACCCGCGAAGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTCTC                                                                                                                                                  >  1:177745/1‑150
    TCGGCGGCAAGGGCGCCGAGGAAATGATCTAAGGTATTCGCGATCCCATAGCCGACGCCGCCTTTTGTAGGAGCGGGTTTACCCGCGAAGGCGTCGGTCCTGGCAATCGACGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTCTC                                                                                                                                                  >  1:4386245/1‑150
      GGCGGCAAGGGCGCCGAGGAAATGATCTAAGGTATTCGCGATCCCATAGCCGACGCCGCCTTTTGTAGGAGCGGGTTTACCCGCGAAGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTCTCAT                                                                                                                                                <  2:6377108/150‑1
         GGCAAGGGCGCCGAGGAAATGATCTAAGGTATTCGCGATCCCATAGCCGACGCCGCCTTTTGTAGGAGCGGGTTTACCCGCGAAGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTCTCATCAA                                                                                                                                             >  1:1644446/1‑150
           CAAGGGCGCCGAGGAAATGATCTAAGGTATTCGCGATCCCATAGCCGACGCCGCCTTTTGTAGGAGCGGGTTTACCCGCGAAGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTCTCATCAAAC                                                                                                                                           >  1:6439272/1‑150
           CAAGGGCGCCGAGGAAATGATCTAAGGTATTCGCGATCCCATAGCCGACGCCGCCTTTTGTAGGAGCGGGTTTACCCGCGAAGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTCTCATCAAAC                                                                                                                                           >  1:6439124/1‑150
            AAGGGCGCCGAGGAAATGATCTAAGGTATTCGCGATCCCATAGCCGACGCCGCCTTTTGTAGGAGCGGGTTTACCCGCGAAGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTCTCATCAAACA                                                                                                                                          >  2:5859142/1‑150
               GGCGCCGAGGAAATGATCTAAGGTATTCGCGATCCCATAGCCGACGCCGCCTTTTGTAGGAGCGGGTTTACCCGCGAAGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTCTCATCAAACAAAA                                                                                                                                       <  2:2041776/150‑1
               GGCGCCGAGGAAATGATCTAAGGTATTCGCGATCCCATAGCCGACGCCGCCTTTTGTAGGAGCGGGTTTACCCGCGAAGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTCTCATCAAACAAAA                                                                                                                                       <  2:2203913/150‑1
                                   AGGTATTCGCGATCCCATAGCCGACGCCGCCTTTTGTAGGAGCGGGTTTACCCGCGAAGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGAAGCATTCGCGGGTGAACCCGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAA                                                                                                                   <  2:8516304/150‑1
                                       ATTCGCGATCCCATAGCCGACGCCGCCTTTTGTAGGAGCGGGTTTACCCGCGAAGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCAC                                                                                                               <  2:3400534/150‑1
                                        TTCGCGATCCCATAGCCGACGCCGCCTTTTGTAGGAGCGGGTTTACCCGCGAAGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACT                                                                                                              >  2:5600835/1‑150
                                                 CCATAGCCGACGCCGCCTTTTGTAGGAGCGGGTTTACCCGCGAAGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCC                                                                                                     >  2:7557921/1‑150
                                                       CCGACGCCGCCTTTTGTAGGAGCGGGTTTACCCGCGAAGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGT                                                                                               <  2:3969828/150‑1
                                                              CGCCTTTTGTAGGAGCGGGTTTACCCGCGAAGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACC                                                                                        >  2:6178944/1‑150
                                                              CGCCTTTTGTAGGAGCGGGTTTACCCGCGAAGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGAACTCAAGCGGCCACCAGTTGATACC                                                                                        >  1:4483133/1‑150
                                                               GCCTTTTGTAGGAGCGGGTTTACCCGCGAAGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCC                                                                                       >  2:8494032/1‑150
                                                                 CTTTTGTAGGAGCGGGTTTACCCGCGAAGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCA                                                                                     <  1:8289796/150‑1
                                                                  TTTTGTAGGAGCGGGTTTACCCGCGAAGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAG                                                                                    >  1:7398786/1‑150
                                                                       TAGGAGCGGGTTTACCCGCGAAGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCC                                                                               <  2:5821127/150‑1
                                                                       TAGGAGCGGGTTTACCCGCGAAGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCC                                                                               <  1:8152627/150‑1
                                                                         GGAGCGGGTTTACCCGCGAAGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGG                                                                             <  2:8283727/150‑1
                                                                              GGGTTTACCCGCGAAGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTT                                                                        <  1:1918407/150‑1
                                                                              GGGTTTACCCGCGAAGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTT                                                                        <  1:1918489/150‑1
                                                                              GGGTTTACCCGCGAAGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTT                                                                        <  1:1918470/150‑1
                                                                                GTTTACCCGCGAAGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGC                                                                      <  2:2672704/150‑1
                                                                                   TACCCGCGAAGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCGAA                                                                   <  1:4994313/150‑1
                                                                                    ACCCGCGTAGGCGTCGGTCCTGGCTATAGAGGTTGTCGCTGCCGAAGCATTCGCGGGTGAACCCGCTCTCATCAAACAAAATGAAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCGAAG                                                                  <  2:2538855/150‑1
                                                                                            AGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCTTCGCAAAGCCC                                                          <  1:4047175/150‑1
                                                                                            AGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCTTCGCAAAGCCC                                                          <  2:1792170/150‑1
                                                                                            AGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCTTCGCAAAGCCC                                                          <  2:1791899/150‑1
                                                                                                                GAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTCCCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCGAAGCAAAGCCCGGACCTGCCGGTCTTGGCTT                                      >  1:2941194/1‑150
                                                                                                                   GTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCGAAGCAAAGCCCGGACCTGCCGGTCTTGGCTTCTG                                   <  2:7207729/150‑1
                                                                                                                       ccaggaCCGACGCCTTCGCGGGTAAACCCGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCGAAGCAAAGCCCGGACCTGCCGGTCTTGGCTTATGGTTT                               >  1:4262949/7‑150
                                                                                                                        CGCTGCCGCCGCATTCGCGGGTGAACCCGCACACATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCACGCGGCCACCAGTTGATACCCCCGTTCCCGGGCTTTGCGAAGAAAAGCCCGGACCTGCCGGTCTTGGCTTCTGGCTTC                              <  2:4327592/150‑1
                                                                                                                                     agaGCGGGTTTACCCGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCGAAGCAAAGCCCGGACCTGCCGGTCTTGGCTTCTGGTTTCGAACTCCTCAAGA                 >  2:5028084/4‑150
                                                                                                                                      TCGCGGGTGAACCCGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCGAAGCAAAGCCCGGACCTGCCGGTCTTGGCTTCTGGTTTCGAACTCCTCAAGAC                <  2:8752374/150‑1
                                                                                                                                       gGCGGGTGAACCCGCTCTAAACAAACAAAATGCAACCCTTTGTTTTCTACCCACTCACGCGGCCCCCTGTTGATCCCCCAGTTGCGGGGCTTTGCTAACCAACGCCCGGACCTGCCGGTCTTGGCTTCTGGTTTCGAACTCCTCAAGACC               <  2:177745/149‑1
                                                                                                                                        GCGGGTGAACCCGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCGAAGCAAAGCCCGGACCTGCCGGTCTTGGCTTCTGGTTTCGAACTCCTCAAGACCT              >  2:4682412/1‑150
                                                                                                                                        GCGGGTGAACCCGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCGAAGCAAAGCCCGGACCTGCCGGTCTTGGCTTCTGGTTTCGAACTCCTCAAGACCT              >  2:4682339/1‑150
                                                                                                                                         CGGGTGAACCCGCTCTCATCAAACAAAATGCAACCCTTTTTTTTCTAACAACTCATGCGGCCACAAGTTGATACCCCAGTTTCCGGGCTTTGCTAAGCAAAGCCCGGACCTGCCGGTCTTGGCTTCTGGTTTCGAACTCCTCAAGACCTT             <  2:6439124/150‑1
                                                                                                                                         CGGGTGAACCCGCTCTCATCAAACAAAATGCAACCCTTTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCGAAGCAAAGCCCGGACCTGCCGGTCTTGGCTTCTGGTTTCGAACTCCTCAAGACCTT             <  2:6439272/150‑1
                                                                                                                                               AACCCGCTCTCATCAAACAAAATGCAACCCTTTTTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCTACGCAAAGCCCGGACCTGCCGGTCTTGGCTTCTGGTTTCGAACTCCTCAAGACCTTGTTCAA       <  2:4178604/150‑1
                                                                                                                                               AACCCGCTCAAATAAAAAAAAATGCAACCCATTGTTTTCTAAGCACACACGCGGCCACCTGTTGATACCCCAGTTCCCGGGCTTTGCGAAGCAAAGCCCGGACCTGCCGGTCTTGGCTTCTGGTTTCGAACTCCTCAAGACCTTGTTCAA       <  2:180207/150‑1
                                                                                                                                                ACCCGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCGAAGCAAAGCCCGGACCTGCCGGTCTTGGCTTCTGGTTTCGAACTCCTCAAGACCTTGTTCAAC      >  2:5895359/1‑150
                                                                                                                                                ACCCGCTCTCATCAAACAAAATGCAACCCAGGGTTTTCTACGCACTCACGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCGAAGCAACGCCCGGACCTGCCGGTCTTGGCTTCTGGTTTCGAACTCCTCAAGACCTTGTTCAAC      <  2:5058464/150‑1
                                                                                                                                                 CCCGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCGAAGCAAAGCCCGGACCTGCCGGTCTTGGCTTCTGGTTTCGAACTCCTCAAGACCTTGTTCAACA     >  1:8550212/1‑150
                                                                                                                                                  CCGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCACGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCGAAGCAAAGCCCGGACCTGCCGGTCTTGGCTTCTGGTTTCGAACTCCTCAAGACCTTGTTCAACAT    <  2:4342328/150‑1
                                                                                                                                                  CCGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCGAAGCAAAGCCCGGACCTGCCGGTCTTGGCTTCTGGTTTCGAACTCCTCAAGACCTTGTTCAACAT    >  1:4069221/1‑150
                                                                                                                                                    GCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCGAAGCAAAGCCCGGACCTGCCGGTCTTGGCTTCTGGTTTCGAACTCCTCAAGACCTTGTTCAACATAA  >  1:4844474/1‑150
                                                                                                                                                                                                                                                                                                          
GTGCTCGGCGGCAAGGGCGCCGAGGAAATGATCTAAGGTATTCGCGATCCCATAGCCGACGCCGCCTTTTGTAGGAGCGGGTTTACCCGCGAAGGCGTCGGTCCTGGCAATCGAGGTTGTCGCTGCCGACGCATTCGCGGGTGAACCCGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4962709‑4962558
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCGAAGCAAAGCCCGGACCTGCCGGTCTTGGCTTCTGGTTTCGAACTCCTCAAGACCTTGTTCAACATAA  >  NC_002947/5227928‑5228073

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.