New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 742614	NA (NA)	4 (0.010)	3/266	NT	NA	coding (712/1422 nt)	PP_0635	group II intron‑encoding maturase
	?	NC_002947	= 1431801	NA (NA)					coding (743/1422 nt)	PP_1250	group II intron‑encoding maturase

AATCGATCTGGAGAAGTTCTTCGATCGAGTCAACCACGACATCCTGATGGCCTGTATCGAGCGCCGGGTCAAAGATAAGTGCGTACTCAGGCTTATTCGCCGCTACCTTGAAGCCGGGATCATGTCGGGCGGTGTCGTCAGCCCACGGCA  >  NC_002947/742466‑742615                                                                                                                                                     |  aagcGATCTGGAGACGTTCTTCGATCGAGTCACCCCCGACAGCCTGATGGCCTGTATCGAGCGCCGGGTCAAAGATAAGTGCGTACTCAGGCTTATTCGCCGCTACCTTGAAGCCGGGATCATGTCGGGCGGTGTCGTCAGCCCACGGCa  <  2:6128961/147‑1 (MQ=1)                                                                                                                                                     |  AATCGATCTGGAGAAGTTCTTCGATCGAGTCAACCACGACATCCTGATGGCCTGTATCGAGCGCCGGGTCAAAGATAAGTGCGTACTCAGGCTTATTCGCCGCTACCTTGAAGCCGGGATCATGTCGGGCGGTGTCGTCAGCCCACGGCA  >  NC_002947/742466‑742615

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.