New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2263051	NA (NA)	34 (0.100)	12/260	NT	17.4%	intergenic (+114/‑278)	PP_1990/asd	transposase/aspartate‑semialdehyde dehydrogenase
	?	NC_002947	= 2263144	172 (0.460)					intergenic (+207/‑185)	PP_1990/asd	transposase/aspartate‑semialdehyde dehydrogenase

ACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAA  >  NC_002947/2262989‑2263200                                                               |                                                                                                                                                      aCCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGC                                                                <  2:5669673‑M2/150‑1 (MQ=255) aCCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACACCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCAGCCAGGGGCCACAGCGCTTTACGGGCATCCATGCCCGTCACCAGCCACCGC                                                                <  2:1714323‑M2/150‑1 (MQ=255)  ccAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCA                                                               >  1:8242777‑M2/1‑150 (MQ=255)  ccAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCGCACGCCCGCCGTGCTCCCCGCAGGACCGCGCCGAAGGCCCCCTCCGGGGGCCGCAGCGCTTGACGGGCCGCCATGCCCGGCACCAGCCGCCGCc                                                               <  2:4516297‑M2/150‑2 (MQ=255)   cAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAA                                                              >  1:2344148‑M2/1‑150 (MQ=255)   cAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAA                                                              >  2:8718038‑M2/1‑150 (MQ=255)   cAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAA                                                              <  2:7220663‑M2/150‑1 (MQ=255)   cAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAA                                                              >  1:7284682‑M2/1‑150 (MQ=255)   cAAAAAACGCTGCGCTCCCATAATCCGGCCCCTGCCCTTCCCTCAGGGGTCCACTCACTCCGGACTTGCTCCCGGCAGGACCGCGCCGAAGGCCCAATCCTGGGGCCTCACCGCTTTACGGGCATACATTCCCGTCACCTGACACCGCAA                                                              <  2:1308310‑M2/150‑1 (MQ=255)    aaaaaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGTCCGCGCCGAAGGCCCCATCCTGGGGCCTCAGAGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAG                                                             >  1:5879743‑M2/1‑150 (MQ=255)    aaaaaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGCAGGCCCCCTCCGGGGGCCTCAGCGCTTGACGGGCCTCCATGCCCGGCACCTGCCTCCGCAAG                                                             <  2:4207100‑M2/150‑1 (MQ=255)    aaaaaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAG                                                             >  1:2574243‑M2/1‑150 (MQ=255)    aaaaaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAG                                                             >  2:2616603‑M2/1‑150 (MQ=255)    aaaaaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACGCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGAAGGGCATCCAAGCCCGTCACCTGCCTACGCAAG                                                             <  2:253460‑M2/150‑1 (MQ=255)     aaaaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAGG                                                            <  2:5621376‑M2/150‑1 (MQ=255)     aaaaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCAGGGGCCGCAGCGCTTGACGGGCATCCATGCCCGTCACCAGCCTCCGCAAGG                                                            <  2:492493‑M2/150‑1 (MQ=255)     aaaaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACAACGGCCTTGCTCCCCGCAGGACCGCGCCGCAGGCCCCAACCGGGGGCCGCAGCGCGTTACGGGCATCCATGCCCGTCACCGGCCTCCCCAAGG                                                            <  2:3006123‑M2/150‑1 (MQ=255)     aaaaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCACACACCCGCCGTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATACTGGGGCCGCAGCCCTTGACGGGCATCCAAGCCCCTCACCGGCCTACCCAAGG                                                            <  2:3006185‑M2/150‑1 (MQ=255)      acaacgCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAGGC                                                           >  1:6533550‑M2/3‑150 (MQ=255)      aaaaCGCTGCGCTCCCCTCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAGGC                                                           >  1:6533507‑M2/1‑150 (MQ=255)      aaaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCCCTCCGGCCTTGCTACCGGCAGGACCGCGCCGAAGGCCCCCTCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCGCCGCAAGGC                                                           <  1:2898973‑M2/150‑1 (MQ=255)      aaaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAGGC                                                           >  2:827708‑M2/1‑150 (MQ=255)      aaaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAGGC                                                           >  2:2936543‑M2/1‑150 (MQ=255)      aaaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCATGCAACCGGCAGGACCCCGCCGAAGGCCCCATCCAGGGGCCACAGCGCATGTCGGGCATCCATGCCCGTCACCAGCCACCGCAAGGC                                                           <  1:2898630‑M2/150‑1 (MQ=255)      aaaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCACACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCAACCTGGGGCCGCAGCGCGGGACGGGCATCCATGCCCGGCACCGGCCACCGCAAGGC                                                           <  1:2898829‑M2/150‑1 (MQ=255)             tGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCGCAGCGCGTGACGGGCATCCAAGCCCGTCACCAGCCACCCCAAGGCCggcgtt                                                    <  1:1400611‑M2/150‑7 (MQ=255)             tGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTACGGCCATGCTCCCGGCAGGACCGCGCCGAAGGCCCCCTCCGGGGGCCTCAGCGCTTGACCGGCCTCCAAGCCCGTCACCTGCCTCCGCAAGGCCggcggt                                                    <  2:5918323‑M2/150‑7 (MQ=255)                                                      cccTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAGGCCtgagtgaggggaccccggagcgcagcgcaggggccggatgatg               <  2:5787529‑M2/146‑44 (MQ=255)                                                      cccTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAGGCCtgagtgaggggaccccggagcgcagcgcaggggccggatgatg               >  1:5787529‑M2/1‑103 (MQ=255)                                                       ccTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAATGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTAACCTGCCTCCCCAAGGCCggagtgaggggaccccggagcgcagcgcaggggccggatgatgggcgc          <  1:4437919‑M2/150‑49 (MQ=255)                                                       ccTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAGGCCtgagtgagggaaccccggagcgcagcgcaggggccggatgatgggagc          <  2:7447950‑M2/150‑49 (MQ=255)                                                       ccTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAG                                                             >  1:6201287‑M2/1‑99 (MQ=255)                                                       ccTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAG                                                             <  2:6201287‑M2/99‑1 (MQ=255)                                                        cTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCtgagtgaggggaccccggagcgcagcgcaggggccggatgatgggagcg         <  2:1370503‑M2/150‑50 (MQ=255)                                                         tCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAGGCCtgagtgagggacccccggagcgcagcgcaggggccggatgatgggagcgc        <  2:5324623‑M2/150‑51 (MQ=255)                                                           gctCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCC‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTCCGCAAGCCCtgagcgaggggaccccggagcgtagcgcaggggccggatgatgggagccgacg     <  1:3533936‑M2/149‑54 (MQ=255)                                                           aCTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCAAACTGGGGCCTCAGCGCGTGACGGGCATCCATGCCCGTCACCTGCCGCCGCCACGCCtgagtgaggggaaccccgagcgcagcgcaggggccggaggattggagcgccg      <  1:5169103‑M2/150‑53 (MQ=255)                                                             tCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCCTCCATGCCCGTCACCTGCCTCCGCAAGGCCggagtgaggggaccccggagcgcagcgccggggccggatgatgggagcgcagcg    <  1:779348‑M2/150‑55 (MQ=255)                                                             tCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCCAGGCCggggtgcggggaccccggagcgcagcgcaggggccggatgctgggagcgccgcg    <  2:4615233‑M2/150‑55 (MQ=255)                                                             tCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCGTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAGGCCtgagtgggggggccccggagcgcagcgcaggggccggatgatgggagcgcagcg    <  1:2934196‑M2/150‑55 (MQ=255)                                                               cGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAGGCCggagtgagggaaccccggagcgcagcgcaggggccggatgatgggagcgcagcgtt  <  2:5288299‑M2/150‑57 (MQ=255)                                                               cGGCCTTGCTCCCGGCAGGACCGCGCAGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCCTCCATGCCCGTCACCTGCCTCCGCCAGGCCggagtgagggaaccccggagcgcagcgcaggggccggatgatgggagcgcagcgtt  <  2:897581‑M2/150‑57 (MQ=255)                                                               |                                                                                                                                                      ACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAA  >  NC_002947/2262989‑2263200

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.