New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 3952933154 (0.410)22 (0.070) 11/220 NT 14.2% coding (109/1797 nt) PP_3483 type II secretion system protein
?NC_002947 = 3952962 143 (0.480)coding (80/1797 nt) PP_3483 type II secretion system protein

Only 100 of 316 total aligned reads displayed.

GGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCG  >  NC_002947/3952784‑3953082
                                                                                                                                                     |                                                                                                                                                     
  tGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTa                                                                                                                                                     >  1:2585474/1‑150 (MQ=255)
      ggTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATc                                                                                                                                                 <  1:3946031/150‑1 (MQ=255)
         gtCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTGGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATcaca                                                                                                                                              <  2:8048332/150‑1 (MQ=255)
         gtCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATcaca                                                                                                                                              <  1:1391936/150‑1 (MQ=255)
         gtCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATcaca                                                                                                                                              <  2:7042330/150‑1 (MQ=255)
         gtCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATcaca                                                                                                                                              <  1:3389044/150‑1 (MQ=255)
          tCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACCGGTACATCACAg                                                                                                                                             >  2:55769/1‑150 (MQ=255)
          tCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAAGTGTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGGCCATCACAg                                                                                                                                             >  2:5275538/1‑150 (MQ=255)
           cGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGatgtatgcagc                                                                                                                                            <  2:8764377‑M1/150‑12 (MQ=255)
             ggggTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTc                                                                                                                                          <  1:6038479/150‑1 (MQ=255)
                 tgtCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCtgtg                                                                                                                                      <  1:3070518/150‑1 (MQ=255)
                   tCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGatgtatgcagcccacagac                                                                                                                                    >  2:2305239‑M1/1‑131 (MQ=255)
                   tCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTCGGTggg                                                                                                                                    >  1:2067442/1‑150 (MQ=255)
                      caggccaggcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGGGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGTAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTg                                                                                                                                 <  1:4455711/150‑1 (MQ=255)
                       aggccaggcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGc                                                                                                                                <  1:1687146/150‑1 (MQ=255)
                       aggccaggcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCGGTGGGCTGc                                                                                                                                >  2:8227334/1‑150 (MQ=255)
                        ggccaggcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCa                                                                                                                               <  1:1257509/150‑1 (MQ=255)
                           caggcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATAc                                                                                                                            >  2:3527744/1‑150 (MQ=255)
                           caggcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGATCCCACAGGTACATCACAGGTCTGTGGGCTGCATAc                                                                                                                            <  1:5086233/150‑1 (MQ=255)
                            aggcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACa                                                                                                                           <  2:4846768/150‑1 (MQ=255)
                              gcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCCCCGGGGCCTCACAGGTCGGTGGGCTGCATACagc                                                                                                                         >  1:6854812/1‑148 (MQ=255)
                              gcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCGCCCACCGGGACATCCCCGGTCTGTGGGCGGCATACagc                                                                                                                         >  1:2412015/1‑148 (MQ=255)
                                 ttCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACGGGTGCATCACAGGGCGGGGGGCTGCATACAAccgg                                                                                                                      >  1:2116356/1‑148 (MQ=255)
                                  tCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgt                                                                                                                     >  1:7175741‑M2/1‑145 (MQ=255)
                                  tCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgt                                                                                                                     >  2:5989437‑M2/1‑145 (MQ=255)
                                   ccAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtg                                                                                                                    >  2:3067257‑M2/1‑144 (MQ=255)
                                   ccAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtg                                                                                                                    >  1:7771973‑M2/1‑144 (MQ=255)
                                    cAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgg                                                                                                                   >  2:1526782‑M2/1‑143 (MQ=255)
                                    cAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGGACATCACAGGTCTGTGGGCTGGCTAGATccggggg                                                                                                                   >  1:8295598/1‑145 (MQ=255)
                                     aGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtggg                                                                                                                  >  2:2602926‑M2/1‑142 (MQ=255)
                                      ggCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgtggga                                                                                                                 <  2:1074900‑M1/150‑39 (MQ=255)
                                      ggCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgtggga                                                                                                                 <  1:6225578‑M1/150‑39 (MQ=255)
                                      ggCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgtggga                                                                                                                 <  2:3866457‑M1/150‑39 (MQ=255)
                                      ggCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACACGTCTGTGGGCTGCATACATcctgtggga                                                                                                                 >  2:4088668‑M2/1‑141 (MQ=255)
                                          gTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgg                                                                                                             <  1:8815559‑M1/150‑43 (MQ=255)
                                          gTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgg                                                                                                             >  2:5209254‑M2/1‑137 (MQ=255)
                                           tCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgtgggagcggg                                                                                                            <  2:25860‑M1/150‑44 (MQ=255)
                                            cGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgggc                                                                                                           <  1:2305239‑M1/150‑45 (MQ=255)
                                              aGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcat                                                                                                         >  1:5499462‑M2/1‑133 (MQ=255)
                                                  ggCGCTCGTCAGTGGCGTGCAGACGGGCCGGGGCCAGGAGGGCGCGGGGGTAGGCGGAAATTTTGGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgccc                                                                                                     >  2:6670674‑M2/1‑129 (MQ=255)
                                                       tCGTCTGTGGCTTGCATAGGGGCCTGGGCCTGGTGGTCGGGGGGGTTGGCGGAAATTTTTGCTGGGTTCTTCGGGGGCATGCCCGCTCCCACCGGTACATCACCGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaa                                                                                                >  2:852198‑M2/1‑124 (MQ=255)
                                                       ccgTCTGTGGCTGGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCAGGCCCGCTCCCACAGGTACATCACCGGTCTGTGGGCTGCATACATccggtgggagcgggcatgcccgcgaa                                                                                                >  2:6921931‑M2/2‑124 (MQ=255)
                                                         gTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGGACATCACAGGTCTGTGGGCTGCATACATactgtgggagcgggcctgcccgcgacgc                                                                                              <  1:6154027‑M2/150‑29 (MQ=255)
                                                            aGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACCGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGt                                                                                           <  2:6493297/150‑1 (MQ=255)
                                                            aGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCGCCCACCGGTACATCACAGGTCTGGGGGCTGCCTAAATCCAGTGGGAGCGGGGATGCCCCCGAAGACgg                                                                                           >  1:5916450/1‑149 (MQ=255)
                                                              gggCTGGCAGAGGGGCCTGGGCCCGGCGGTCGGGGGGGTATGCGGAAACTGGGGGTGGGTTCGGCGCGGGCAGGCCCGCTCCCACCGGTACAGCCCAGGCCTGGGGCCTGCATACATCCGGTGGGAGCGGGCATGCCCGCGAAGACGTCg                                                                                         <  2:6837397/149‑1 (MQ=255)
                                                                gCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATccggtgggagcgggcaagcccccgacgaacacggg                                                                                       <  1:2863680‑M2/150‑36 (MQ=255)
                                                                   ggctgcggggCCGGGGCCCGGCGGTCGGGGGGGTTGGCGTAATTTTTTGCGGGGTCCTTCGGGGGCAGGCCCGCCCCCACAGGTACCTCACCGGTCGGTGGGCTGCATACAGCCTGTGGGAGGGGGAATGCCCGCGAAGACGTCGGTGCa                                                                                    <  2:8373452/143‑1 (MQ=255)
                                                                                    cAGGAGGTCGCGGGGGTTGGCGGAAATTTGTGCTGGGTTCTTCGCGGGCATGCCCGCGCCCACCGGTACATCACCGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCgg                                                                   <  2:5004940/150‑1 (MQ=255)
                                                                                    cAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCATGTGGGAGCGGGCATGCCCGCGACGACGTCGGTGCAGGCTTTGCAGATTCCgg                                                                   >  1:8049400/1‑150 (MQ=255)
                                                                                    cAGGAGGTCGCGGGGGGAGGCGGAAATTTTTGCGGGGTTCTTCGCGGGCATGCCCGCTCCCACGGGTACATCACAGGTCTGTGGGCAGCATACATCCTGTGGGAGCGGGCCTGCCCGCGACCACGTCGGTGCAGGCGTTTCAGATTCAgg                                                                   >  2:4765834/1‑150 (MQ=38)
                                                                                       gaggTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGCAGACGTCGGTGCAGGCGTTGCGGATTCCGGGGt                                                                >  2:6382090/1‑150 (MQ=255)
                                                                                             gggggggTCGGGGGAAATTTGTGCGGGGGGCTCCGCGGGCCGGCCCGCGCCCCCCGGTCCCGCCCCGGTCTGGGGGCTGCATCCAGCCGGGGGGAGGGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATc                                                          <  2:2374309/148‑1 (MQ=255)
                                                                                                ggggTAGGCGGAAATTTTGGGTGGGTTCTTCGGGGGCATGCCCGCTCCCACTGGTACATCCCCGGTCTGTGGGCTGCATACCTCGGGTGGGCGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGaa                                                       <  2:6038523/150‑1 (MQ=255)
                                                                                                        cgaatttttttGCTGGGTTGTTCGGGGGCATGCCCGCGCCCACCGGTACAGCACCGGTCGGTGGGCTGCATACAGCCGGTGGGCGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTg                                               <  2:3085213/144‑1 (MQ=255)
                                                                                                         ggAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACCGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCCTGCCCCCGACGCCGGCGGTGCAGGCGGTGCCGATTCGGGGGGTGCATCGGATGcggcagg                                              >  1:5046070/1‑144 (MQ=255)
                                                                                                         ggAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCCTGCCCGCGAAGACGACGGTGCAGGCTGTGCCGATTCCGGGGGTGCCTCGAATGCTTCTgg                                              >  1:8650754/1‑150 (MQ=38)
                                                                                                         ggAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTgg                                              >  2:4884978/1‑150 (MQ=255)
                                                                                                             aTTTTTGCGGGGTTCTTCGCGGGCAGGCCCGCTCCCACCGGTACATCACAGGTCTGTGGGCGGCCTACCTCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATg                                          <  2:2749802/150‑1 (MQ=255)
                                                                                                                    cTGGGTTCTTCGCGGGCATGCCCGCGCCCACCGGTACATCCCAGGTCGGTGGGCTGCAGACAGCCGGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCg                                   <  2:1320804/150‑1 (MQ=255)
                                                                                                                       ggTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACt                                >  2:3287121/1‑150 (MQ=255)
                                                                                                                                ggggCTTGCCCGCTCCCACCGTTACATCACTGGTCTGTGGGCTGCATACATCCTGTGGGCGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAgg                       <  2:2143765/149‑1 (MQ=255)
                                                                                                                                 gggCATGCCCGCTCCCCCAGGatgtatgcagcccaccgccctgtgaggtcccggtgggagcgggcatgcccgcgaagaacccagcaaacatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcc                      <  2:389409‑M1/150‑130 (MQ=255)
                                                                                                                                   gcctGCCCGCTCCCCCCGGTCCCTCACCGGTCTGTGGGCTGCATACCTCCGGGGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGgc                    <  2:8626171/147‑1 (MQ=255)
                                                                                                                                   gCATGCCCGCTCCCACTGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGgc                    <  2:7864014/150‑1 (MQ=255)
                                                                                                                                   gCATGCCCGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctg                    >  2:7418312‑M1/1‑19 (MQ=255)
                                                                                                                                     aTGCCCGCTCCCACCGGatgtatgcagcccaccgacctgtgatgtacctgtgggagcgggcatgcccgcgacgaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgct                  >  2:6217179‑M1/1‑17 (MQ=255)
                                                                                                                                     aTGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGgcgc                  >  2:7506962/1‑150 (MQ=255)
                                                                                                                                       gCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGCGGCGCGt                >  2:6571959/1‑150 (MQ=255)
                                                                                                                                        cccGCTCCCACCGGatgtaagcagcccacagacctgtgctgcaccggtgggagcgggcatgcccgcgaagaacccagaaaaaatttccgcctacccccgcgacctccgggcccaggcccgtctgcaagccactgacgagcgcctgctcga               <  1:4246355‑M1/150‑137 (MQ=255)
                                                                                                                                        cccGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcga               <  1:4600486‑M2/150‑108 (MQ=255)
                                                                                                                                         tcggccccACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCg              <  2:2537668/145‑1 (MQ=255)
                                                                                                                                         ccGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgac              >  1:8121137‑M1/1‑13 (MQ=255)
                                                                                                                                         ccGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgac              <  2:894102‑M2/150‑109 (MQ=255)
                                                                                                                                         ccGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCg              >  1:3266319/1‑150 (MQ=255)
                                                                                                                                         ccGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCg              >  2:5107448/1‑150 (MQ=255)
                                                                                                                                          cGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgact             >  2:2977551‑M1/1‑12 (MQ=255)
                                                                                                                                          cGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgact             <  2:4336786‑M2/150‑110 (MQ=255)
                                                                                                                                          cGCCCCCACCGGatgtatgcagcccacagacctgtgatgtaccggtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgact             <  1:7750611‑M1/150‑139 (MQ=255)
                                                                                                                                           gCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgactg            <  1:3754374‑M2/150‑111 (MQ=255)
                                                                                                                                           gCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCa            >  2:5839699/1‑150 (MQ=255)
                                                                                                                                           gCTCCAACTGTTACATCAGTGGTGTGTGGGCTGAATACTGCGTGTGGGCGGGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCa            <  1:1141145/150‑1 (MQ=255)
                                                                                                                                            cccccacAGGatgtacgcagcccacacacctgtgatgtacctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgaccccctggcccaggcccgtctgcaagccactgacgagcgcctgctcgactgc           <  1:6112467‑M1/148‑141 (MQ=255)
                                                                                                                                             tCCCACCGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgactgcc          <  1:6950293‑M1/150‑142 (MQ=255)
                                                                                                                                             tCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgactgcc          <  2:5901747‑M2/150‑113 (MQ=255)
                                                                                                                                             tCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgactgcc          <  2:3932763‑M2/150‑113 (MQ=255)
                                                                                                                                             tCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgactgcc          <  1:5266611‑M2/150‑113 (MQ=255)
                                                                                                                                               ccACAGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgactgcctg        >  2:3392367‑M1/1‑7 (MQ=255)
                                                                                                                                               ccACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgactgcctg        <  1:4835513‑M2/150‑115 (MQ=255)
                                                                                                                                               ccACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGACGACGTCGGAGCAGGCTTTTCAGATTCCGGGGTTGCAACGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAggct        >  1:406665/1‑150 (MQ=255)
                                                                                                                                               ccACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAggct        >  1:8565183/1‑150 (MQ=255)
                                                                                                                                               ccACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAggct        >  1:7510705/1‑150 (MQ=255)
                                                                                                                                                cacaGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgactgcctgg       >  1:8806330‑M1/1‑6 (MQ=255)
                                                                                                                                                cacaGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgactgcctgg       >  1:1930839‑M1/1‑6 (MQ=255)
                                                                                                                                                cacaGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAggctg       >  2:7735096/1‑150 (MQ=255)
                                                                                                                                                 acaGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgactgcctgga      <  2:1396190‑M1/150‑146 (MQ=255)
                                                                                                                                                 acaGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgactgcctgga      >  1:2845799‑M1/1‑5 (MQ=255)
                                                                                                                                                   cggaggtatgcagcccaccgaccggggatggcccggggggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgactgcctggaac    <  1:6403757‑M1/149‑148 (MQ=255)
                                                                                                                                                   aGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAggctggct    >  1:7171296/1‑150 (MQ=255)
                                                                                                                                                     gatgtatgcagcccacagacctgtgatgtacctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgactgcctggaacgc  >  2:7314348‑M1/1‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCG  >  NC_002947/3952784‑3953082

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.