BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	499188 =	93 (0.250)	27 (0.070)	10/268	NT	14.8%	intergenic (+29/‑267)	uhpA/PP_0411	two‑component system response regulator UhpA/polyamine ABC transporter ATP‑binding protein
*	?	NC_002947	499291 =	221 (0.610)	27 (0.070)	10/268	NT	14.8%	intergenic (+132/‑164)	uhpA/PP_0411	two‑component system response regulator UhpA/polyamine ABC transporter ATP‑binding protein

Only 100 of 265 total aligned reads displayed.

GAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTACTCTTTTGCCTACGCAGTCATCCAAC  >  NC_002947/499142‑499440

gAGCACAAGCTGATCTGTTTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGt                                                                                                                                                       <  2:8012809/150‑1 (MQ=255)

    acaTGCTGATCTGTTGGCGACTTAGGGGTGCCCTAATGTGGCCGACGCCTTTGTGGGCGCGGGCATGCCCGCGACGGGGCGTGGCCTGCTTATCTCTAGGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGtt                                                                                                                                                   <  2:6828669/150‑1 (MQ=25)

             tctgatTGCGACATAGGGGGGCCCGAACCTCGCCGACGCCTTTGTGGGCGCGGGCATGCCCGCGACCGGGCCTGGCCTGCTGATCTCTAGGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCaa                                                                                                                                          <  2:6911331/150‑1 (MQ=38)

             tctgatTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCGCTATGGCTGGGCCGGCCTCTTCGCGGGCCGGCCCGCGCCCACACGTTTCGTGGTTGGCTCGCaa                                                                                                                                          >  2:1300659/1‑150 (MQ=255)

                     cGACATACGGGGGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTc                                                                                                                                  <  2:6443330/150‑1 (MQ=255)

                      gACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGCACCGGCCAGGCCGGCGGGTCTCGATGGCGGAGCCGGCCGCGTCGCGGGCCTGCCCCCTCCCACAGGGGTCGTGGTTGGCTCGCAAGGGccgtcc                                                                                                                                 >  2:5339919/1‑145 (MQ=255)

                               gTGCCCGAACCTTGCCGACGCCTAGGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGcc                                                                                                                        <  2:5068954/150‑1 (MQ=255)

                                   ccGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCCCGGACCGGCCTGGCCGGCTGCTCTCTATGGCTGCGCCGGCCGCTTCGCGGGCAGGCCCGCGCCCCCAGGTTTCGTGGGTGGCTCGCCAGGGCATTCCAATCCCGCCAAcc                                                                                                                    >  2:3462014/1‑150 (MQ=255)

                                    cGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATTCCCGCGAACGGGCCTGGCCGGCTGATCTCTATGGCTGAGCCGGCCTCTTAGCGGGCATGCCCGCTCCCACAGGTTTAGTGGTTTGCTCGCAAGGGCAATACAAACCCGCCaaacg                                                                                                                   >  2:8402177/1‑146 (MQ=38)

                                    cGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCGTCGCGGGCATGCCCGCTCCCACAGCTTTCGGGGTTGGCTCGCAAGGGCAATCCAATCCCGCCCTcca                                                                                                                   >  2:5827648/1‑149 (MQ=255)

                                           aaccacgaaacctgtgggagcgggcatgcccgcgaagaggccggctcagccatagagatcagccggccaggcccgttcgcgggcctgcccgctcccacaggtttcgTGGTTGGCTCGCAAGGGCAATACAAACCCGCCATCCATGTAggg                                                                                                            >  2:1330378‑M2/107‑150 (MQ=255)

                                             ccGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCAGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCg                                                                                                          <  2:2297385/150‑1 (MQ=255)

                                                       tgtgGGTGCGGGCATGCCCGCGAAGGGGCCTGGCCTGCTGATCTATAGGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGATCGCCCTacaa                                                                                                <  2:540057/150‑1 (MQ=38)

                                                           ggAGCGGGCTTGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACaaa                                                                                            <  2:1442968/150‑1 (MQ=255)

                                                            gagcgggcatgcccgcgaagaggccggctcagccatagagatcagcaggccaggcccgttcgcgggcatgcccgctcccacaggtttcgTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAAt                                                                                           >  2:728165‑M2/90‑150 (MQ=255)

                                                              gCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCt                                                                                         >  1:3474623/1‑150 (MQ=255)

                                                              gCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCATGTAGGGCGATCCCTACAACAAAACt                                                                                         >  1:6324886/1‑150 (MQ=255)

                                                               cGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCtt                                                                                        <  2:5683042/150‑1 (MQ=255)

                                                                gggCAGGCCCGCGAACGGGCCTGGCCTGCTGATCTCTCTGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTc                                                                                       <  2:4286928/150‑1 (MQ=255)

                                                                 ggCTTGCCCGCGAACGGGCCTGGCCTGCTGATCTCTTTGGCTGAGCCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTcc                                                                                      <  2:2685181/150‑1 (MQ=255)

                                                                  gCATGCCCGCGAACGGGCCTGGCCTGCTGTTCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCa                                                                                     <  2:7909407/150‑1 (MQ=255)

                                                                  gCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCa                                                                                     >  1:7244740/1‑150 (MQ=255)

                                                                     tgcccgcgaagaggccggctcagccatagagatcagcaggccaggcccgttcgcgggcatgcccgctcccacaggtttcgTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATcc                                                                                  >  1:7584117‑M2/81‑150 (MQ=255)

                                                                       cccGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCgg                                                                                >  2:3527704/1‑150 (MQ=255)

                                                                        gcgaagaggccggctcagccatagagatcagcaggccaggcccgttcgcgggcatgcccgctcccacataggcttcgTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGga                                                                               >  2:3143699‑M2/78‑150 (MQ=255)

                                                                        ccgcgaagaggccggctcagccatagagatcagcaggccaggcccgttcgcgggcatgcccgctcccacaggtttcgTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGga                                                                               >  1:5640583‑M2/78‑150 (MQ=255)

                                                                        ccgcgaagaggccggctcagccatagagatcagcaggccaggcccgttcgcgggcatgcccgctcccacaggtttcgTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGga                                                                               >  2:6780164‑M2/78‑150 (MQ=255)

                                                                        ccGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGga                                                                               >  1:7977632/1‑150 (MQ=255)

                                                                         cgcgaagaggccggctcagccatagagatcagcaggccaggcccgttcgcgggcatgcccgctcccacaggtttcgTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGgat                                                                              >  2:5707544‑M2/77‑150 (MQ=255)

                                                                         cgcgAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGgat                                                                              >  2:4728254/1‑150 (MQ=255)

                                                                          gcgaagaggccggctcagccatagagatcagcaggccaggcccgttcgcgggcatgcccgctcccacaggtttcgTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGgatg                                                                             >  2:5657107‑M2/76‑150 (MQ=255)

                                                                                gggCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCa                                                                       >  1:664264/1‑150 (MQ=255)

                                                                                gccggctcagccatagagatcagcaggccaggcccgttcgcgggcatgcccgctcccacataggcttcgTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCCTCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGAGGATGGCa                                                                       >  1:2423319‑M2/70‑150 (MQ=255)

                                                                                  gcctggcctgCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCAtt                                                                     >  1:1214028/1‑150 (MQ=255)

                                                                                  gccggctcagccatagagatcagcaggccaggcccgttcgcgggcatgcccgctcccacaggtttcgTGGTTGACTCGCAAGGGCATTCCAATCCCGCCCTCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCAtt                                                                     >  1:7685316‑M2/68‑150 (MQ=255)

                                                                                  gccggctcagccatagagatcagcaggccaggcccgttcgcgggcatgcccgctcccacaggtttcgTGGTTGACTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCAtt                                                                     >  1:7101123‑M2/68‑150 (MQ=255)

                                                                                   ggctcagccatagagatcagcaggccaggcccgttcgcgggcatgcccgctcccacataggcttcgTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATtc                                                                    >  1:4324768‑M2/67‑150 (MQ=255)

                                                                                     tggcctgCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATtctc                                                                  >  2:5132837/1‑150 (MQ=255)

                                                                                     tggcctgCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAAACTTCCATCCGGATGATGGCATtctc                                                                  >  1:3094962/1‑150 (MQ=255)

                                                                                      ggcctgCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCAACCATGTAGGGCGATCCCGACAACAAATCTTCCAGCCGGATGATGGCAGtctct                                                                 >  1:2366951/1‑150 (MQ=39)

                                                                                       gcgtgctgATCTCTTTGGCTGCGCCGGCCTCTGCGCGGGCTTCCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATtctctc                                                                <  2:1500000/147‑1 (MQ=255)

                                                                                       gcctgCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATtctctc                                                                >  2:1401968/1‑150 (MQ=255)

                                                                                         ctgctgATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAg                                                              >  1:2122875/1‑150 (MQ=255)

                                                                                             tgATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATATTCCATCCGGATGATGGCATTCTCTCAGTAcc                                                          >  1:8360456/1‑150 (MQ=255)

                                                                                             tgATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCAAGCCCGCACCCACAGGTTTAGTGGTTGGCTCGCAAGGGCAATCCAAACCCGCCAAACTTGTAGGGCGATCCCTAAAACAAATCTACCATACGGAAGAAGGCATTATCTCACTAcc                                                          >  1:5945170/1‑150 (MQ=255)

                                                                                                tctcTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTAccccc                                                       >  1:3504625/1‑150 (MQ=255)

                                                                                                  tctATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATTGCATTCTCTCAGTACCCCCGa                                                     >  1:6814588/1‑150 (MQ=255)

                                                                                                  tctATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGa                                                     >  2:5977916/1‑150 (MQ=255)

                                                                                                    tATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTacaa                                                                                                >  1:8775710/1‑105 (MQ=255)

                                                                                                    tATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGAtt                                                   >  2:2707522/1‑150 (MQ=255)

                                                                                                    tATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGAtt                                                   >  1:4107738/1‑150 (MQ=255)

                                                                                                    tATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGAtt                                                   >  2:7120823/1‑150 (MQ=255)

                                                                                                    tATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCGTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCAGTCTCTCAGTACCCCCGAtt                                                   >  2:1747439/1‑150 (MQ=255)

                                                                                                       ggCTGAGCCGCCCTCTTCGCGGCCATCCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTc                                                <  1:5883805/150‑1 (MQ=255)

                                                                                                        gCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCg                                               >  2:2643312/1‑150 (MQ=255)

                                                                                                        gCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCAGCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCg                                               >  2:8684223/1‑150 (MQ=255)

                                                                                                         cTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCgg                                              <  2:3601700/150‑1 (MQ=255)

                                                                                                                ggCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTg                                       >  1:4693581/1‑150 (MQ=255)

                                                                                                                gcccTCTTCGGGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTg                                       <  1:7743562/148‑1 (MQ=255)

                                                                                                                 gCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGc                                      >  1:331990/1‑150 (MQ=255)

                                                                                                                 gCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGc                                      >  2:3739201/1‑150 (MQ=255)

                                                                                                                 ccgttcgcgggcatgcccgctcccacataggcttcgTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGc                                      >  1:29948‑M2/37‑150 (MQ=255)

                                                                                                                  tgtgggagcgGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCg                                     >  2:7037731/8‑150 (MQ=255)

                                                                                                                   ctctTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGt                                    <  2:2036876/150‑1 (MQ=255)

                                                                                                                   ctctTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGt                                    <  2:6306735/150‑1 (MQ=255)

                                                                                                                   ctctTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGt                                    >  1:2101433/1‑150 (MQ=255)

                                                                                                                   ctctTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGt                                    >  1:5116903/1‑150 (MQ=255)

                                                                                                                     ctTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGtct                                  >  2:1286699/1‑150 (MQ=255)

                                                                                                                      ttCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGtctc                                 >  2:7714761/1‑150 (MQ=255)

                                                                                                                       tCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTctct                                <  1:8684223/150‑1 (MQ=255)

                                                                                                                       gcgggggCAGCCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTctct                                <  1:383061/146‑1 (MQ=255)

                                                                                                                        cgggggCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCtctt                               <  2:3813199/147‑1 (MQ=255)

                                                                                                                         gcgGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCtcttc                              <  2:1936668/150‑1 (MQ=255)

                                                                                                                           gggCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTa                            >  2:2262839/1‑150 (MQ=255)

                                                                                                                               ccgCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTActct                        <  1:7449709/148‑1 (MQ=255)

                                                                                                                               aTGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTctct                                <  2:3894023/142‑1 (MQ=255)

                                                                                                                               aTGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTActct                        >  2:7569871/1‑150 (MQ=255)

                                                                                                                               aTGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTActct                        >  1:8050387/1‑150 (MQ=255)

                                                                                                                                tGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTACTCtt                       >  2:5499539/1‑150 (MQ=255)

                                                                                                                                   ccGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTACTCTTTTg                    >  1:5101846/1‑150 (MQ=255)

                                                                                                                                   ccGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTACTCTTTTg                    >  2:6636749/1‑150 (MQ=255)

                                                                                                                                     gCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTACTCTTTTGcc                  >  1:6270797/1‑150 (MQ=255)

                                                                                                                                       tCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTACTCTTTTGCCTa                <  2:491803/150‑1 (MQ=255)

                                                                                                                                         ccACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTACTCTTTTGCCTACg              >  1:6962892/1‑150 (MQ=255)

                                                                                                                                         ccACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTACTCTTTTGCCTACg              >  1:2632128/1‑150 (MQ=255)

                                                                                                                                         ccACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTACTCTTTTGCCTACg              >  2:3309718/1‑150 (MQ=255)

                                                                                                                                         ccACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTACTCTTTTGCCTACg              >  2:4490060/1‑150 (MQ=255)

                                                                                                                                         ccACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTACTCTTTTGCCTACg              >  2:2939150/1‑150 (MQ=255)

                                                                                                                                          cacaGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTACTCTTTTGCCTACGc             >  2:5359140/1‑150 (MQ=255)

                                                                                                                                          cacaGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTACTCTTTTGCCTACGc             >  1:3077841/1‑150 (MQ=255)

                                                                                                                                          cacaGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTACTCTTTTGCCTACGc             >  1:3909925/1‑150 (MQ=255)

                                                                                                                                          cacaGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTACTCTTTTGCCTACGc             >  2:5409456/1‑150 (MQ=255)

                                                                                                                                           acaGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTACTCTTTTGCCTACGCa            >  1:1562240/1‑150 (MQ=255)

                                                                                                                                           acaGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTACTCTTTTGCCTACGCa            >  2:4827125/1‑150 (MQ=255)

                                                                                                                                           acaGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTACTCTTTTGCCTACGCa            >  1:5340008/1‑150 (MQ=255)

                                                                                                                                           acaGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTACTCTTTTGCCTACGCa            >  2:5006064/1‑150 (MQ=255)

                                                                                                                                               gTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTACTCTTTTGCCTACGCAGTCa        >  1:5605765/1‑150 (MQ=255)

                                                                                                                                                tttCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTACTCTTTTGCCTACGCAGTCAt       <  2:8061383/150‑1 (MQ=255)

                                                                                                                                                  tcgTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTACTCTTTTGCCTACGCAGTCATcc     >  1:5404672‑M2/4‑150 (MQ=255)

                                                                                                                                                     tGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTACTCTTTTGCCTACGCAGTCATCcaac  >  2:4118258/1‑150 (MQ=255)

GAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCTCTTCTACTCTTTTGCCTACGCAGTCATCCAAC  >  NC_002947/499142‑499440

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.