BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 499220	116 (0.310)	15 (0.050)	6/228	NT	12.0%	intergenic (+61/‑235)	uhpA/PP_0411	two‑component system response regulator UhpA/polyamine ABC transporter ATP‑binding protein
*	?	NC_002947	= 499259	124 (0.400)	15 (0.050)	6/228	NT	12.0%	intergenic (+100/‑196)	uhpA/PP_0411	two‑component system response regulator UhpA/polyamine ABC transporter ATP‑binding protein

Only 100 of 226 total aligned reads displayed.

CTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCT  >  NC_002947/499111‑499408

cTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCt                                                                                                                                                      >  2:1484956‑M2/1‑149 (MQ=255)

   atccggatggaagatttgttgtagggatcgccctacaaggatggcgggattggaatgcccttgcgagccaaccaCGAACCCT‑‑GTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTcgcg                                                                                                                                                 >  1:873296‑M1/75‑150 (MQ=255)

   atccggatggaagatttgttgtagggatcgccctacaaggatggcgggattggaatgcccttgcgagccaaccaCGAAACCT‑‑GTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTcgcg                                                                                                                                                 >  2:5707403‑M1/75‑150 (MQ=255)

    tccggatggaagatttgttgtagggatcgccctacaaggatggcgggtttggaatgcccttgcgagccaaccaCGAAACCT‑‑GTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCgg                                                                                                                                                >  1:7165021‑M1/74‑150 (MQ=255)

    tccggatggaagatttgttgtagggatcgccctacaaggatggcgggattggaatgcccttgcgagccaaccaCGAAACCT‑‑GTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCgg                                                                                                                                                >  2:6780164‑M1/74‑150 (MQ=255)

     tGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCttcgcg                                                                                                                                                 >  1:6329062‑M2/1‑144 (MQ=255)

     tGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCttcgcg                                                                                                                                                 >  1:5821595‑M2/1‑144 (MQ=255)

     gggcGGAGGTGGTGACGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCttcgcg                                                                                                                                                 >  1:2174650‑M2/2‑144 (MQ=255)

      ggCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGGGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCttcgcgg                                                                                                                                                >  1:1880927‑M2/1‑143 (MQ=255)

      ggCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCttcgcgg                                                                                                                                                >  1:6113898‑M2/1‑143 (MQ=255)

      ggCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCttcgcgg                                                                                                                                                >  1:4827178‑M2/1‑143 (MQ=255)

      cggatggaagatttgttgtagggatcgccctacaaggatggcgggattggaatgcccttgcgagccaaccaCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCgg                                                                                                                                                >  1:448257‑M1/72‑150 (MQ=255)

       gCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCCCACGGGCCCGGGCGGCTGGTCTCAATGGCTGGGCCGGCCGCgtcgcggg                                                                                                                                               <  1:6492323‑M2/150‑9 (MQ=255)

          gAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCttcgcgggcat                                                                                                                                            >  2:3111661‑M2/1‑139 (MQ=255)

            gCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCttcgcgggcatgc                                                                                                                                          >  1:3517783‑M2/1‑137 (MQ=255)

            gCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCttcgcgggcatgc                                                                                                                                          >  2:595791‑M2/1‑137 (MQ=255)

            gCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCAAGCCCCCGAACGGGCCTGGCCGGCGGATCTCGATGGCGGGGCCCGCCCCgtcgcgggccagc                                                                                                                                          <  2:3743799‑M2/150‑14 (MQ=255)

              tGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCttcgcgggcatgccc                                                                                                                                        >  1:5588375‑M2/1‑135 (MQ=255)

               ggTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATTCCCGCGAACCGGCCTGGCCTGCTGATATCTAAGGCTGAGACGGCCAAtaagcgggcatgaccc                                                                                                                                       <  1:8054194‑M2/150‑17 (MQ=255)

                gTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCCTGCCCGCGCACCGGCCGGGCCGGGGGATCTAAAATGCTGAGCCGGCCGCGTGGCGGGCCAGccccg                                                                                                                                      >  1:3529250/1‑148 (MQ=255)

                gTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCCTGCCCGCGACCCGGCCGGGCCGGCGGGTCGAAATGGCTGGGCCGGCCGCGTCGCGGGGCTGCCCGc                                                                                                                                      >  2:73200/1‑150 (MQ=255)

                  gAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACGTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCtgcgcgggcatgcccgctc                                                                                                                                    >  2:6585598‑M2/1‑131 (MQ=255)

                   aaGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCGGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCttcgcgggcatgcccgcgaa                                                                                                                                   >  2:2422224‑M2/1‑130 (MQ=255)

                        cGCCATGGTGCACAAGCTGATCTGTTTGCGCCATAGGGGGGCCCGAACCGTGCCGACGCCTTTGTGGGAGCGGGCCGGCCCGCGAAGGGGCCTGGCCTGCTGATCTCTTTGGCTGAGCGGGCCTCTTCGCGGGCATGCCCGCTCCCACAg                                                                                                                              <  2:8761501/150‑1 (MQ=255)

                               gAGCACACGCTGATCTGATTGCCACATACGGGTGCCCGAAACTTGCCGAAGCCTATGGGGGCGCGGGCATGCCCGCGACCGGGCCTGGCCTGCTGATCTCTATGGCGGAGCCGGCCCCTACGCGGGCATGCCCGCTCCCACAGGTTTCGt                                                                                                                       <  2:5667029/150‑1 (MQ=255)

                               gAGCACAAGCTGATCTGTTTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGt                                                                                                                       <  2:8012809/150‑1 (MQ=255)

                                 ccctacatggatggcgggtttgtattgcccttgcgagccaaccaCGAAACCT‑‑GTGGGAGCGGGCAGGCCCGCGAACGGGCCTGGCCGGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGtt                                                                                                                   >  2:1330378‑M1/45‑150 (MQ=255)

                                  cacaACCTGATCTGATTGCGACATACGGGTGTCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCCCACCGGCCAGGCCGGCTGTTCTCAATTGGTGTGCCCGCCGCTTAGCGGGCAAGCCCGCTACCACAGGTTTAGTGGt                                                                                                                    >  2:1327233/1‑150 (MQ=255)

                                   acaTGCTGATCTGTTGGCGACTTAGGGGTGCCCTAATGTGGCCGACGCCTTTGTGGGCGCGGGCATGCCCGCGACGGGGCGTGGCCTGCTTATCTCTAGGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGtt                                                                                                                   <  2:6828669/150‑1 (MQ=25)

                                            tctgatTGCGACATAGGGGGGCCCGAACCTCGCCGACGCCTTTGTGGGCGCGGGCATGCCCGCGACCGGGCCTGGCCTGCTGATCTCTAGGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCaa                                                                                                          <  2:6911331/150‑1 (MQ=38)

                                              tgatTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACCGGCCAGGCCAGCGGCTCGCTAGGGCGGAGCCGGCCACGTCGCGGGCACGCCCCCTCCCACAGGGTTCGGGGTTGGCGCGCAAgg                                                                                                        >  2:474667/1‑150 (MQ=255)

                                                    cGACATACGGGGGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTc                                                                                                  <  2:6443330/150‑1 (MQ=255)

                                                     gACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGCACCGGCCAGGCCGGCGGGTCTCGATGGCGGAGCCGGCCGCGTCGCGGGCCTGCCCCCTCCCACAGGGGTCGTGGTTGGCTCGCAAGGGccgtcc                                                                                                 >  2:5339919/1‑145 (MQ=255)

                                                               tGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCCCGAACGGGCCTGGCCGGCGGATCTCTATGGCTGGGCCGGCCGCTTAGCGGGCAGGCCCGCGCCCCCAGGTTTCGTGGTTGGGTCGCCAGGGCATTCCAATACCGCCa                                                                                       >  2:1383169/1‑150 (MQ=255)

                                                                gCCCGAAACGTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCGTGCTGATCTCTAGGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCAt                                                                                      <  2:4905215/150‑1 (MQ=255)

                                                                  ccGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCCCGGACCGGCCTGGCCGGCTGCTCTCTATGGCTGCGCCGGCCGCTTCGCGGGCAGGCCCGCGCCCCCAGGTTTCGTGGGTGGCTCGCCAGGGCATTCCAATCCCGCCAAcc                                                                                    >  2:3462014/1‑150 (MQ=255)

                                                                   cGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATTCCCGCGAACGGGCCTGGCCGGCTGATCTCTATGGCTGAGCCGGCCTCTTAGCGGGCATGCCCGCTCCCACAGGTTTAGTGGTTTGCTCGCAAGGGCAATACAAACCCGCCaaacg                                                                                   >  2:8402177/1‑146 (MQ=38)

                                                                   cGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCGTCGCGGGCATGCCCGCTCCCACAGCTTTCGGGGTTGGCTCGCAAGGGCAATCCAATCCCGCCCTcca                                                                                   >  2:5827648/1‑149 (MQ=255)

                                                                    gAAACTTGCCGAAGCCTATGTGGGAGCGGGCTTGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCtt                                                                                  <  2:3637992/150‑1 (MQ=255)

                                                                      aaCTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGt                                                                                >  2:5712843/1‑150 (MQ=255)

                                                                         ttGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCGGCTCTCTATGGCTGGGCCGGCCGCGTCGCGGGCATGCCCGCGCCCCCAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCCCCATCCGTGTAgg                                                                             >  2:3833922/1‑150 (MQ=255)

                                                                            ccGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCAGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCg                                                                          <  2:2297385/150‑1 (MQ=255)

                                                                                      tgtgGGTGCGGGCTTGCCCGCGACCGGGCCTGGCCTGCTGATCTCTTTGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGATCGCCCTacaa                                                                <  2:540439/150‑1 (MQ=38)

                                                                                          ggAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTTTGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACaaa                                                            <  2:1443121/150‑1 (MQ=255)

                                                                                             gCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCt                                                         >  1:4243700/1‑150 (MQ=255)

                                                                                             gCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCAACCATGTAGGGCGATCCCGACAACAAATCt                                                         >  1:2544034/1‑150 (MQ=255)

                                                                                              ggggCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCtt                                                        <  2:2148466/149‑1 (MQ=255)

                                                                                               gggCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCt                                                                    >  1:6676289/1‑137 (MQ=255)

                                                                                               gggCAGGCCCGCGAACGGGCCTGGCCTGCTGATCTCTCTGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTc                                                       <  2:4286928/150‑1 (MQ=255)

                                                                                                ggCTTGCCCGCGAACGGGCCTGGCCTGCTGATCTCTTTGGCTGAGCCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTcc                                                      <  2:2685181/150‑1 (MQ=255)

                                                                                                 gCATGCCCGCGAACGGGCCTGGCCTGCTGTTCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCa                                                     <  2:7909407/150‑1 (MQ=255)

                                                                                                 gCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCa                                                     >  2:6022277/1‑150 (MQ=255)

                                                                                                    tGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCttcgcgggcatgcccgctcccacataggcttcggcaagtttcgggcacccgtatgtcgcaatcagatcagcttgtgctccatggcgtacttcaccagctcc                                                  <  1:3347097‑M2/150‑102 (MQ=255)

                                                                                                      cccGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCgg                                                >  2:3527704/1‑150 (MQ=255)

                                                                                                       ccGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCttcgcgggcctgcccgctcccacataggcttcggcaagtttcgggcacccgtatgtcgcaatcagatcagcttgtgctccatggcgtacttcaccagctccgcc                                               <  2:1034977‑M2/150‑105 (MQ=255)

                                                                                                       ccGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCttcgcgggcatgcccgctcccacataggcttcggcaagtttcgggcacccgtatgtcgcaatcagatcagcttgtgctccatggcgtacttcaccagctccgcc                                               <  1:8469197‑M2/150‑105 (MQ=255)

                                                                                                       ccGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCttcgcgggcatgcccgctcccacaggtttcggccagtttcgggcacccgtatgtcgcaatcagatcagcttgtgctccatggcgtacttcaccagctccgccag                                               <  1:367293‑M2/150‑105 (MQ=255)

                                                                                                       ccGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGga                                               >  1:7977632/1‑150 (MQ=255)

                                                                                                       ccGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGga                                               >  2:6226843/1‑150 (MQ=255)

                                                                                                       ccGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGga                                               >  2:7213372/1‑150 (MQ=255)

                                                                                                        cgcgAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCttcgcgggcatgcccgctcccacataggcttcggcaagtttcgggcacccgtatgtcgcaatcagatcagcttgtgctccatggcgtacttcaccagctccgcca                                              <  1:1112499‑M2/150‑106 (MQ=255)

                                                                                                        cgcgAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGgat                                              >  2:4437256/1‑150 (MQ=255)

                                                                                                        cgcgAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGgat                                              >  1:6567790/1‑150 (MQ=255)

                                                                                                         gcgAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCCTCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGgatg                                             >  2:6396800/1‑150 (MQ=255)

                                                                                                            aaCGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCttcgcgggcatgcccgctcccacataggcttcggcaagtttcgggcacccgtatgtcgcaatcagatcagcttgtgctccatggcgtacttcaccagctccgccagcga                                          <  2:1538122‑M2/150‑110 (MQ=255)

                                                                                                                 gcctggcctgCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCAtt                                     >  1:1516480/1‑150 (MQ=255)

                                                                                                                    tggcctgCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATtctc                                  >  1:3094482/1‑150 (MQ=255)

                                                                                                                     ggcctgCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCAACCATGTAGGGCGATCCCGACAACAAATCTTCCAGCCGGATGATGGCAGtctct                                 >  1:2366951/1‑150 (MQ=39)

                                                                                                                      gcctgCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATtctctc                                >  2:1401968/1‑150 (MQ=255)

                                                                                                                       cctgCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCa                               >  2:5090027/1‑150 (MQ=255)

                                                                                                                            tgATCTCTTTGGGTGCGCGGGCCTCTTGGGGGGCCTGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTAcc                          <  1:8260550/150‑1 (MQ=255)

                                                                                                                            tgATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTAcc                          >  2:7535128/1‑150 (MQ=255)

                                                                                                                            tgATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATATTCCATCCGGATGATGGCATTCTCTCAGTAcc                          >  1:8360456/1‑150 (MQ=255)

                                                                                                                            tgATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCAAGCCCGCACCCACAGGTTTAGTGGTTGGCTCGCAAGGGCAATCCAAACCCGCCAAACTTGTAGGGCGATCCCTAAAACAAATCTACCATACGGAAGAAGGCATTATCTCACTAcc                          >  1:5945170/1‑150 (MQ=255)

                                                                                                                             gATCTCTATGGCTGAGCCGGCCTCttcgcgggcatgcccgcacccacataggcttcggcaagtttcgggcacccggatgtcgcaatcagatcagcttgtgctccatggcgtacttcaccagctccgccagcgagttcactttcaacatct                         <  1:7560778‑M2/150‑127 (MQ=255)

                                                                                                                             gATCTCTATGGCTGAGCCGGCCTCTACGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCCTCCTTGTAGGGCGGTCCCTACAACAAGAGGTCCATGCGGATGATGGCGTTCTCTCAGTTccc                         >  2:4176933/1‑150 (MQ=38)

                                                                                                                               tctcTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTAccccc                       >  1:3504625/1‑150 (MQ=255)

                                                                                                                                  ctATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGAt                    >  2:7647323/1‑150 (MQ=255)

                                                                                                                                   tATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGAtt                   >  2:2893578/1‑150 (MQ=255)

                                                                                                                                   tATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGAtt                   >  1:3422862/1‑150 (MQ=255)

                                                                                                                                   tATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGAtt                   >  2:3331622/1‑150 (MQ=255)

                                                                                                                                   tATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGAtt                   >  1:7730894/1‑150 (MQ=255)

                                                                                                                                   tATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGAtt                   >  2:2397584/1‑150 (MQ=255)

                                                                                                                                   tATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGAtt                   >  1:2110174/1‑150 (MQ=255)

                                                                                                                                   tATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGAtt                   >  2:2707522/1‑150 (MQ=255)

                                                                                                                                   tATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCGTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCAGTCTCTCAGTACCCCCGAtt                   >  2:1747439/1‑150 (MQ=255)

                                                                                                                                      ggCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTc                <  1:7310671/150‑1 (MQ=255)

                                                                                                                                      ggCTGAGCCGCCCTCTTCGCGGCCATCCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTc                <  1:5883805/150‑1 (MQ=255)

                                                                                                                                       gCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCg               >  2:2643312/1‑150 (MQ=255)

                                                                                                                                               ggCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTg       >  1:4693581/1‑150 (MQ=255)

                                                                                                                                                gCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGc      >  1:331944/1‑150 (MQ=255)

                                                                                                                                                gCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGc      >  2:5392367/1‑150 (MQ=255)

                                                                                                                                                gCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGc      >  1:1614247/1‑150 (MQ=255)

                                                                                                                                                  ctctTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGt    >  1:5116903/1‑150 (MQ=255)

                                                                                                                                                  ctctTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGt    <  2:2036876/150‑1 (MQ=255)

                                                                                                                                                   tctTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGtc   >  2:6673037/1‑150 (MQ=255)

                                                                                                                                                   tctTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGtc   >  1:5623473/1‑150 (MQ=255)

                                                                                                                                                   tctTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGtc   >  2:1986577/1‑150 (MQ=255)

                                                                                                                                                   tctTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTC‑GGCGCTTGCGtag  >  2:7064165/1‑148 (MQ=255)

                                                                                                                                                    ctTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGtct  >  2:1286699/1‑150 (MQ=255)

CTCGCTGGCGGAGCTGGTGAAGTACGCCATGGAGCACAAGCTGATCTGATTGCGACATACGGGTGCCCGAAACTTGCCGAAGCCTATGTGGGAGCGGGCATGCCCGCGAACGGGCCTGGCCTGCTGATCTCTATGGCTGAGCCGGCCTCTTCGCGGGCATGCCCGCTCCCACAGGTTTCGTGGTTGGCTCGCAAGGGCATTCCAATCCCGCCATCCTTGTAGGGCGATCCCTACAACAAATCTTCCATCCGGATGATGGCATTCTCTCAGTACCCCCGATTTTCGGGCGCTTGCGTCT  >  NC_002947/499111‑499408

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.