Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC NC_002947 1,515,769 Δ33 bp 100% pseudogene (757‑789/1851 nt) PP_1325 ← putative lipoprotein

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_002947 1515769 1515801 33 394 [0] [0] 396 PP_1325 putative lipoprotein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1515802 =0 (0.000)251 (0.960) 114/192 NT 100% pseudogene (756/1851 nt) PP_1325 putative lipoprotein
?NC_002947 = 1515768 0 (0.000)pseudogene (790/1851 nt) PP_1325 putative lipoprotein

Only 100 of 396 total aligned reads displayed.

CGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCGGGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCAGGGTGCCGGCGCTTTTCACGGCGAAGGC  >  NC_002947/1515655‑1515951
                                                                                                                                                   |                                                                                                                                                     
cgagccgatgcgtgagctgtcgaacacctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCtt                                                                                                                                                     >  1:4690116‑M1/148‑150 (MQ=255)
 gagccgatgcgtgagctgtcgaacacctgtaccgcaggcgctggctggccgctgtgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTg                                                                                                                                                    >  2:7006522‑M1/147‑150 (MQ=255)
   gccgatgcgtgagctgtcgaacacctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGt                                                                                                                                                  >  2:6630522‑M1/145‑150 (MQ=255)
   gccgatgcgtgagctgtcgaacacctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGt                                                                                                                                                  <  2:8413608‑M1/6‑1 (MQ=255)
   gccgatgcgtgagctgtcgaacacctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGt                                                                                                                                                  >  2:4217815‑M1/145‑150 (MQ=255)
     cgatgcgtgagctgtcgaacacctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCa                                                                                                                                                >  2:7694023‑M1/143‑150 (MQ=255)
     cgatgcgtgagctgtcgaacacctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCa                                                                                                                                                <  1:5047353‑M1/8‑1 (MQ=255)
        tgcgtgagctgtcgaacacctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCg                                                                                                                                             >  1:7912875‑M1/140‑150 (MQ=255)
              agctgtcgaacacctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCggctggc                                                                                                                                       <  1:8642457‑M1/17‑1 (MQ=255)
                ctgtcgaacacctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGgctggctg                                                                                                                                     >  1:2322327‑M1/132‑150 (MQ=255)
                ctgtcgaacacctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGgctggctg                                                                                                                                     <  1:479457‑M1/19‑1 (MQ=255)
                   ttgaacacctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGcc                                                                                                                                  <  2:2484609‑M1/22‑1 (MQ=255)
                   tcgaacacctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGcc                                                                                                                                  >  2:7313900‑M1/129‑150 (MQ=255)
                   tcgaacacctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGcc                                                                                                                                  >  1:3108367‑M1/129‑150 (MQ=255)
                     gaacacctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAg                                                                                                                                <  1:4432694‑M1/24‑1 (MQ=255)
                      aacacctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGc                                                                                                                               <  2:1248443‑M1/25‑1 (MQ=255)
                      aacacctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCGTGGTCAGCGGCTGGCTGGCCAGc                                                                                                                               <  1:1367706‑M1/25‑1 (MQ=255)
                       acacctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCt                                                                                                                              >  1:5710785‑M1/125‑150 (MQ=255)
                        cacctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTc                                                                                                                             >  2:367692‑M1/124‑150 (MQ=255)
                         acctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTggccagccagccgc                                                                                                                            >  1:3689284‑M1/123‑147 (MQ=255)
                         acctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTcc                                                                                                                            <  2:8120427‑M1/28‑1 (MQ=255)
                         acctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTcc                                                                                                                            <  2:4990052‑M1/28‑1 (MQ=255)
                          cctgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCtggctggc                                                                                                                                   >  1:8273431‑M1/122‑142 (MQ=255)
                            tgtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTg                                                                                                                         <  2:6796607‑M1/31‑1 (MQ=255)
                             gtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGa                                                                                                                        <  1:3411124‑M1/32‑1 (MQ=255)
                             gtaccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGa                                                                                                                        >  1:2379948‑M1/119‑150 (MQ=255)
                              taccgcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAg                                                                                                                       <  1:3304766‑M1/33‑1 (MQ=255)
                                  gcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcggcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTg                                                                                                                   >  2:5808675‑M1/114‑150 (MQ=255)
                                  gcaggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTAGAGCTTg                                                                                                                   <  1:6608324‑M1/37‑1 (MQ=255)
                                     ggcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTc                                                                                                                >  2:479457‑M1/111‑150 (MQ=255)
                                      gcgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCa                                                                                                               <  2:7864559‑M1/41‑1 (MQ=255)
                                       cgctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAg                                                                                                              >  2:71736‑M1/109‑150 (MQ=255)
                                        gctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAgg                                                                                                             <  1:5412128‑M1/43‑1 (MQ=255)
                                        gctggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAgg                                                                                                             >  2:2010915‑M1/108‑150 (MQ=255)
                                        gctggctggccgctttgctgggcctggaagtgggcgaccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAgg                                                                                                             >  1:2257758‑M1/108‑150 (MQ=255)
                                          tggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGc                                                                                                           <  1:6352104‑M1/45‑1 (MQ=255)
                                          tggctggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGc                                                                                                           >  1:3217881‑M1/106‑150 (MQ=255)
                                               ggccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCg                                                                                                      <  2:2653354‑M1/50‑1 (MQ=255)
                                                gccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCgg                                                                                                     <  1:2568256‑M1/51‑1 (MQ=255)
                                                gccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCgg                                                                                                     <  1:2051487‑M1/51‑1 (MQ=255)
                                                 ccgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGc                                                                                                    <  1:1122172‑M1/52‑1 (MQ=255)
                                                  cgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCa                                                                                                   >  1:1698252‑M1/98‑150 (MQ=255)
                                                  cgctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCa                                                                                                   <  2:8218562‑M1/53‑1 (MQ=255)
                                                    ctttgctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGt                                                                                                 <  2:403068‑M1/55‑1 (MQ=255)
                                                        gctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCt                                                                                             >  2:3248046‑M1/92‑150 (MQ=255)
                                                         ctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTg                                                                                            >  1:3062840‑M1/91‑150 (MQ=255)
                                                         ctgggcctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTg                                                                                            >  1:2724775‑M1/91‑150 (MQ=255)
                                                               ctggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTCGGTCAGGGCCAGCGGCAGTTGCTGggcggc                                                                                      <  2:7578314‑M1/66‑1 (MQ=255)
                                                                 ggaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAg                                                                                    <  2:8732525‑M1/68‑1 (MQ=255)
                                                                  gaagtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAgg                                                                                   >  1:754673‑M1/82‑150 (MQ=255)
                                                                     gtgggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGggtg                                                                                >  2:5958823‑M1/79‑150 (MQ=255)
                                                                        ggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTc                                                                             <  2:1876665‑M1/75‑1 (MQ=255)
                                                                        ggcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTc                                                                             <  2:7413054‑M1/75‑1 (MQ=255)
                                                                         gcggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTcc                                                                            <  2:6119155‑M1/76‑1 (MQ=255)
                                                                           ggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCgg                                                                          <  1:4162807‑M1/78‑1 (MQ=255)
                                                                           ggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCgg                                                                          <  2:525537‑M1/78‑1 (MQ=255)
                                                                           ggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCgg                                                                          >  2:5179616‑M1/73‑150 (MQ=255)
                                                                           ggccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCgg                                                                          >  1:8402706‑M1/73‑150 (MQ=255)
                                                                             ccatgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGt                                                                        <  1:6789812‑M1/80‑1 (MQ=255)
                                                                                tgaagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCt                                                                     >  1:27424‑M1/68‑150 (MQ=255)
                                                                                  aagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGGAGGGTGGTCCGGGTGCTGt                                                                   >  1:2937242‑M1/66‑150 (MQ=255)
                                                                                  aagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGt                                                                   >  1:1268720‑M1/66‑150 (MQ=255)
                                                                                  aagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGt                                                                   >  2:2305870‑M1/66‑150 (MQ=255)
                                                                                  aagccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGt                                                                   >  1:2124291‑M1/66‑150 (MQ=255)
                                                                                   agccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGtt                                                                  <  1:7008891‑M1/86‑1 (MQ=255)
                                                                                   agccatcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGtt                                                                  >  2:3516616‑M1/65‑150 (MQ=255)
                                                                                      catcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGa                                                               >  2:2960945‑M1/62‑150 (MQ=255)
                                                                                       atcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGAc                                                              <  1:4948758‑M1/90‑1 (MQ=255)
                                                                                        tcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGAcc                                                             <  2:8582937‑M1/91‑1 (MQ=255)
                                                                                        tcgcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGACTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGAcc                                                             >  2:4157743‑M1/60‑150 (MQ=255)
                                                                                          gcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCa                                                           <  2:4671497‑M1/93‑1 (MQ=255)
                                                                                          gcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCa                                                           >  1:8805250‑M1/58‑150 (MQ=255)
                                                                                          gcgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCa                                                           <  2:1006119‑M1/93‑1 (MQ=255)
                                                                                          gcgcagggcgcgggctacaccggccagcgggacttcctgaggctgcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCTGGGTGGTCCGGGTGCTGTTTGACCCa                                                           <  1:7675303‑M1/93‑1 (MQ=255)
                                                                                           cgcagggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAg                                                          >  1:3554622‑M1/57‑150 (MQ=255)
                                                                                               gggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCtt                                                      <  2:1432423‑M1/98‑1 (MQ=255)
                                                                                                ggcgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTc                                                     >  2:4450275‑M1/52‑150 (MQ=255)
                                                                                                  cgcgggctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGa                                                   <  2:4715298‑M1/101‑1 (MQ=255)
                                                                                                        ctacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCg                                             >  1:1843026‑M1/44‑150 (MQ=255)
                                                                                                         tacaccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGc                                            <  2:6412003‑M1/108‑1 (MQ=255)
                                                                                                            accggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTtg                                         >  1:3849486‑M1/40‑150 (MQ=255)
                                                                                                             ccggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTtgc                                        >  1:5297505‑M1/39‑150 (MQ=255)
                                                                                                              cggccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTtgct                                       >  2:1241511‑M1/38‑150 (MQ=255)
                                                                                                              cggccagcgggccgtcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTtgct                                       <  1:643534‑M1/113‑1 (MQ=255)
                                                                                                                gccagcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTtgctgc                                     >  2:4323165‑M1/36‑150 (MQ=255)
                                                                                                                   agcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTtgctgctgc                                  >  1:4897440‑M1/33‑150 (MQ=255)
                                                                                                                   agcgggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTtgctgctgc                                  >  2:5469466‑M1/33‑150 (MQ=255)
                                                                                                                       ggccttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCa                              >  2:7217613‑M1/29‑150 (MQ=255)
                                                                                                                          cttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCAggg                           <  1:7184166‑M1/125‑1 (MQ=255)
                                                                                                                           ttcctgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGACAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCAGGGt                          <  1:5195894‑M1/126‑1 (MQ=255)
                                                                                                                               tgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCAGGGTGCCg                      <  2:4591644‑M1/130‑1 (MQ=255)
                                                                                                                               tgaggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCAGGGTGCCg                      >  1:6094858‑M1/21‑150 (MQ=255)
                                                                                                                                 aggcagcagcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCAGGGTGCCGgc                    <  2:6754463‑M1/132‑1 (MQ=255)
                                                                                                                                         gcagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCAGGGTGCCGGCGCTTTTCa            <  2:5579891‑M1/140‑1 (MQ=255)
                                                                                                                                          cagggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTCTTTGAACCAGGCTTCGATGGCCGCTTGCTGCTGCTCCAGGGTGCCGGCGCTTTTCAc           <  2:2228257‑M1/141‑1 (MQ=255)
                                                                                                                                           agggcgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCAGGGTGCCGGCGCTTTTCACg          >  2:1590321‑M1/9‑150 (MQ=255)
                                                                                                                                               cgatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCAGGGTGCCGGCGCTTTTCACGGCGa      <  2:1065819‑M1/146‑1 (MQ=255)
                                                                                                                                                gatCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCAGGGTGCCGGCGCTTTTCACGGCGaa     <  1:1483976‑M1/147‑1 (MQ=255)
                                                                                                                                                 atCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCAGGGTGCCGGCGCTTTTCACGGCGAAg    >  2:7072087‑M1/3‑150 (MQ=255)
                                                                                                                                                 atCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCAGGGTGCCGGCGCTTTTCACGGCGAAg    >  2:4883909‑M1/3‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
CGCAGGCGCTGGCTGGCCGCTTTGCTGGGCCTGGAAGTGGGCGGCCATGAAGCCATCGCGCAGGGCGCGGGCTACACCGGCCAGCGGGCCTTCCTGAGGCAGCAGCAGGGCGATCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGCGGCTGGCTGGCCAGCTCCTTGAGCTTGGTCAGGGCCAGCGGCAGTTGCTGGGCGGCAGGGTGGTCCGGGTGCTGTTTGACCCAGGCTTCGATGGCCGCTTGCTGCTGCTCCAGGGTGCCGGCGCTTTTCACGGCGAAGGC  >  NC_002947/1515655‑1515951

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑