| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,606,072 | T→C | 7.5% | L186P (CTG→CCG) | PP_2279 → | head‑to‑tail joining protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,606,072 | 0 | T | C | 7.5% | 946.8 / 37.2 | 311 | L186P (CTG→CCG) | PP_2279 | head‑to‑tail joining protein |
| Reads supporting (aligned to +/- strand): ref base T (136/149); new base C (7/16); total (144/167) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.31e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 313 total aligned reads displayed.
GCATTTGATTGTTGGCGGCAACGGCCTTGTGTACCTGCCCCAGCAGGGCGGCATGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTGAGACCTGGAACGTGTATCAGGAGGTCAAGGGCCAGATTGTTC > NC_002947/2605923‑2606221 | ttGATTGTTGGCGGCAACGGCCTTGTGTACCTGCCCCAGCAGGGCGGCATGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCa < 1:2771041/150‑1 (MQ=255) ttGATTGTTGGCGGCAACGGCCTTGTGTACCTGCCCCAGCAGGGCGGCATGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCa < 1:901262/150‑1 (MQ=255) gATTGTTGGCGGCAACGGCCTTGTGTACCTGCCCCAGCAGGGCGGCATGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCaga < 1:1283891/150‑1 (MQ=255) gATTGTTGGCGGCAACGGCCTTGTGTACCTGCCCCAGCAGGGCGGCATGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCaga < 2:648890/150‑1 (MQ=255) ttgttgGCGGCAACGGCCTTGTGTACCTGCCCCAGCAGGGCGGCATGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCAGTACCGCCaggga < 2:5441024/150‑4 (MQ=255) ttgttgGCGGCAACGGCCATGTGTACCTGCCCCAGCAGGGCGGCATGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAgagg < 2:6116012/150‑1 (MQ=255) tgttgtCGGCAACGGCCTTGTGTACCTGCCCCAGCAGGGCGGCATGAAGTTCTACCCCCTTGACAGCTAAGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAATGAGGAGGTCTCCCTGGCGGTACTGCCAgagga > 2:7299328/1‑150 (MQ=255) tgttgGCGGCAACGGCCTTGTGTACCTGCCCCAGCAGGGCGGCATGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCTCTGGCAGTACCGCCagggag < 1:4154836/150‑5 (MQ=255) cggcAACGGCCTTGTGTACCTGCCCCAGCAGGGCGGCATGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCg < 1:2137021/150‑1 (MQ=255) cggcAACGGCCTTGTGTACCTGCCCCAGCAGGGCGGCATGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCg < 2:3843753/150‑1 (MQ=255) cggcAACGGCCTTGTGTACCTGCCCCAGCAGGGCGGCATGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCg > 2:6301967/1‑150 (MQ=255) gcAACGGCCTTGTGTACCTGCCCCAGCAGGGCGGCATGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGt < 1:8593849/150‑1 (MQ=255) cAACGGCCTTGTGTACCTGCCCCAGCAGGGCGGCATGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTc > 2:164443/1‑150 (MQ=255) aaCGGCCTTGTGTACCTGCCCCAGCAGGGCGGCATGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCa > 1:990290/1‑150 (MQ=255) cGGCCTTGTGTACCTGCCCCAGCAGGGCGGCATGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCAtt > 2:6168188/1‑150 (MQ=255) ggCCTTGTGTACCTGCCCCAGCAGGGCGGCATGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTa < 1:7584798/150‑1 (MQ=255) ggCCTTGTGTACCTGCCCCAGCAGGGCGGCATGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTa < 1:428253/150‑1 (MQ=255) cTTGTGTACCTGCCCCAGCAGGGCGGCATGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTc < 1:5537495/150‑1 (MQ=255) cTTGTGTACCTGCCCCAGCAGGGCGGCATGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAAAGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAgac > 2:450247/1‑148 (MQ=255) tgtgTACCTGCCCCAGCAGGGCGGCATGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGa < 2:7103618/150‑1 (MQ=255) tgtgTACCTGCCCCAGCAGGGCGGCATGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGa < 1:6284642/150‑1 (MQ=255) gtgtACCTGCCCCAGCAGGGCGGCATGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAg > 2:76179/1‑150 (MQ=255) ccTGCCCCAGCAGGGCGGCATGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTgg > 2:2328980/1‑150 (MQ=255) cTGCCCCAGCAGGGCGGCATGAAGTTCTACCCCCTTGACAGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGACAAGGAGGAGGTCTCCCTGGCGGTACAGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGc > 2:1904088/1‑150 (MQ=255) cccAGCAGGGCGGCATGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCAGTACCGCCaggga > 2:7925136/1‑117 (MQ=255) ccAGCAGGGCGGCATGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGa < 1:805653/150‑1 (MQ=255) ccAGCAGGGCGGCATGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGa < 1:6660362/150‑1 (MQ=255) ggcggcATGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGc < 1:477883/150‑1 (MQ=255) gcggcATGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCg > 1:5802026/1‑150 (MQ=255) ggcATGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGac < 1:7892325/150‑1 (MQ=255) gcATGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGaca < 1:7504231/150‑1 (MQ=255) cATGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGacac > 1:1601900/1‑150 (MQ=255) tGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGGGACAccc > 2:1167346/1‑150 (MQ=255) tGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACAccc > 1:417658/1‑150 (MQ=255) tGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACAccc > 1:770070/1‑150 (MQ=255) tGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACAccc > 1:5376696/1‑150 (MQ=255) tGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACAccc < 1:6478126/150‑1 (MQ=255) gTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCg > 1:564559/1‑150 (MQ=255) ttCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCga > 2:4973339/1‑150 (MQ=255) ttCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCga < 1:8503868/150‑1 (MQ=255) ttCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCga > 1:8776272/1‑150 (MQ=255) aCCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCga > 1:349723/1‑146 (MQ=255) aCCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGAcc < 1:7959439/150‑1 (MQ=255) cccccTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCa < 2:1429099/150‑1 (MQ=255) ccccTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCAt < 2:7010817/150‑1 (MQ=255) cccTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATa > 2:862449/1‑150 (MQ=255) cTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAAc > 2:1779209/1‑150 (MQ=255) aCCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGa < 2:2963275/150‑1 (MQ=255) cGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAAc < 1:4493098/150‑1 (MQ=255) tACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGtc < 2:8290974/150‑1 (MQ=255) cGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGtctc < 1:5861583/150‑1 (MQ=255) ggTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGAt < 2:803927/150‑1 (MQ=255) ccGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGcc < 1:2579641/79‑1 (MQ=255) ccGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGcc > 2:2579641/1‑79 (MQ=255) gCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGTGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCAGAACAAGAACGTCTCGATCTacac > 2:7681749/1‑150 (MQ=255) gTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACAccc < 1:3891699/150‑1 (MQ=255) gTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACAccc < 1:7780945/150‑1 (MQ=255) ccAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATc > 1:3281340/1‑150 (MQ=255) cAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCa > 1:716754/1‑150 (MQ=255) cctGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCAc < 2:2176570/148‑1 (MQ=255) aaTGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCAc > 2:6033113/1‑150 (MQ=255) cAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCaa < 1:1988614/150‑1 (MQ=255) cAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGGACTGCCAGAGGAGGCCCGGt < 2:6379573/65‑1 (MQ=255) aaCGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAg < 1:4527446/150‑1 (MQ=255) ccTGGAAATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTga < 1:4824923/150‑1 (MQ=255) cTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTgag > 2:664874/1‑150 (MQ=255) cTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTgag > 2:4822100/1‑150 (MQ=255) tGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTgaga < 2:3109624/150‑1 (MQ=255) ggACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTTGAGGGTgatgt < 1:250860/150‑4 (MQ=255) ggACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTGAGAc > 2:3586640/1‑150 (MQ=255) gACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTTGAGGGTgatgtg < 1:2285866/150‑5 (MQ=255) aCATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTGAGACCt < 1:1106636/150‑1 (MQ=255) aCATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTGAGACCt < 2:8796230/150‑1 (MQ=255) aCATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTGAGACCt < 1:1812939/150‑1 (MQ=255) cATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTTGAGGGTgatgtggg < 1:3126216/150‑7 (MQ=255) gTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAACAACGACTCGATCTACACCCACAACACCCTCAAGGGTGAGACCTGGAAc > 2:4232552/1‑150 (MQ=255) gccAAGGACGAGCTCTCCCCGGCGGCACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTCGCGATGACACCGGCGACACCCCCCGACACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTGAGACCTGGAACgtg < 2:3352253/148‑1 (MQ=255) cAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGAGACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTGAGACCTGGAACGTGTa < 2:1832887/150‑1 (MQ=255) aaGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTGAGACCTGGAACGTGTAt > 1:3323509/1‑150 (MQ=255) aaGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTGAGACCTGGAACGTGTAt > 2:4163247/1‑150 (MQ=255) ggaggaggTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTGAGACCTGGAACGTGTATCa > 2:6536112/1‑150 (MQ=255) ggaggaggTCTCCCTGGCGGTACTGCCAGAGGAGACCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTGAGACCTGGAACGTGTATCa > 2:8124469/1‑150 (MQ=255) cgaggaggTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGCTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCCACACCAGAACAAGAACGACTCGATATACACACACATCACCATCAAGCGTGAGACCTGGAACGTGTATCa > 2:4835372/2‑150 (MQ=255) gaggaggTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTGAGACCTGGAACGTGTATCag > 1:6111404/1‑150 (MQ=255) gaggaggTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTGAGACCTGGAACGTGTATCag < 1:2868210/150‑1 (MQ=255) gaggaggTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTGAGACCTGGAACGTGTATCag < 1:8272794/150‑1 (MQ=255) aggaggTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTGAGACCTGGAACGTGTATCagg > 2:4685870/1‑150 (MQ=255) gaggACGCCCCGGCCGGACAGCCAGAGGAGGCCCGGCCCTTAGCCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATACCAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTGAGACCTGGAACGTGTATCaggag < 2:5276152/150‑1 (MQ=255) tctcCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTGAGACCTGGAACGTGTATCAGGAGGTCa > 1:6306297/1‑150 (MQ=255) ctcctcTGGCAGTACCGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTGAGACCTGGAACGTGTATCAGGAGGTCa > 1:5181954/6‑150 (MQ=255) tcctcTGGCAGTACCGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTGAGACCTGGAACGTGTATCAGGAGGTCaa > 1:2917307/5‑150 (MQ=255) cccTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTGAGACCTGGAACGTGTATCAGGAGGTCAAgg > 1:6944601/1‑150 (MQ=255) tcTGGCAGTACCGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTGAGACCTGGAACGTGTATCAGGAGGTCAAggg > 1:355555/2‑150 (MQ=255) ccTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTGAGACCTGGAACGTGTATCAGGAGGTCAAggg > 2:1887313/1‑150 (MQ=255) ccTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTGAGACCTGGAACGTGTATCAGGAGGTCAAggg > 2:5909137/1‑150 (MQ=255) ggTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTGAGACCTGGAACGTGTATAAGGAGGTCAAGGGCCAGAt > 2:5686059/1‑150 (MQ=255) gTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTGAGACCTGGAACGTGTATCAGGAGGTCAAGGGCCAGAtt < 1:6713387/150‑1 (MQ=255) gTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTGAGACCTGGAACGTGTATCAGGAGGTCAAGGGCCAGAtt < 1:164427/150‑1 (MQ=255) aCTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTGAGACCTGGAACGTGTATCAGGAGGTCAAGGGCCAGATTGt > 2:202144/1‑150 (MQ=255) tGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTGAGACCTGGAACGTGTATCAGGAGGTCAAGGGCCAGATTGTTc > 1:8695017/1‑150 (MQ=255) | GCATTTGATTGTTGGCGGCAACGGCCTTGTGTACCTGCCCCAGCAGGGCGGCATGAAGTTCTACCCCCTTGACCGCTACGTGGTCCGGCGTGACCCAATGGGCAACGTCCTGGACATCGTGGTCAAGGAGGAGGTCTCCCTGGCGGTACTGCCAGAGGAGGCCCGGTCATTAGTCGAGCCTGGCGATGACTCCGGCGACACCCCCCGAGACCATAACAAGAACGTCTCGATCTACACCCACATCACCCTCAAGGGTGAGACCTGGAACGTGTATCAGGAGGTCAAGGGCCAGATTGTTC > NC_002947/2605923‑2606221 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |