| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,669,011 | T→G | 8.6% | intergenic (+44/‑119) | prpC → / → acnA‑II | methylcitrate synthase/aconitate hydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,669,011 | 0 | T | G | 8.6% | 559.9 / 2.7 | 208 | intergenic (+44/‑119) | prpC/acnA‑II | methylcitrate synthase/aconitate hydratase |
| Reads supporting (aligned to +/- strand): ref base T (47/130); new base G (11/14); total (61/147) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.66e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 213 total aligned reads displayed.
GGCGGCGCACGTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACA‑GGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAG > NC_002947/2668862‑2669160 | ggcggcGCACGTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGt < 1:5295881/150‑1 (MQ=255) cggcgCACGTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGc < 2:5969547/150‑1 (MQ=255) cggcgCACGTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGc < 2:5724070/150‑1 (MQ=255) ggcgCACGTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGGGTggc > 1:618368/1‑148 (MQ=255) gTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAAt < 2:4887178/150‑1 (MQ=255) gTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCACGCCcgctccc < 2:4505231/150‑5 (MQ=255) cTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGTGGGAGCGGGCGTGCCCGCGAATGc < 1:7480014/150‑1 (MQ=255) ttCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGGATGCa > 1:2873536/1‑150 (MQ=255) ttCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCa < 2:5043588/150‑1 (MQ=255) tCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCAc < 2:6363970/150‑1 (MQ=255) gcagcGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCgg < 1:7186079/150‑1 (MQ=255) agcGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGcc < 2:6788883/150‑1 (MQ=255) cgcgcCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCtt < 2:6648959/150‑1 (MQ=255) cgcgcCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCtt < 2:5027549/150‑1 (MQ=255) cgcgcCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGGGGCCGCGGCTGGACCCCGccgg > 1:7551098/1‑148 (MQ=255) gcgcCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTg < 1:8549440/150‑1 (MQ=255) cgcCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGt < 1:7317578/150‑1 (MQ=255) gcCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCCGCCTTGTa > 2:5012086/1‑150 (MQ=255) gcCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCCCGAATGCACCCGGCCTTGTa > 2:618305/1‑150 (MQ=255) ccAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTaa < 2:1713661/150‑1 (MQ=255) caacaaCCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAAc < 2:1863276/150‑1 (MQ=255) caacaaCCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAAGGCACCCGGCCGTGTAAc > 2:3215898/1‑150 (MQ=255) caacaaCCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGGGGCCGCGGATGCACCCGCCCGTGTAAc > 1:6514834/1‑150 (MQ=255) acaacCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCa < 1:3078988/150‑1 (MQ=255) acaacCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCa < 1:4038623/150‑1 (MQ=255) aacCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGGGGGCCCGCGCCAGCGCCCGGCCGTGTGAcaccc > 1:5469838/1‑146 (MQ=255) aacCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACt < 2:8438745/150‑1 (MQ=255) acCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTCTAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACtg < 2:127041/150‑1 (MQ=255) ccGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACtgt < 1:1001679/150‑1 (MQ=255) ccGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACtgt < 1:8695894/150‑1 (MQ=255) gCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGc < 2:7471201/150‑1 (MQ=255) atcatcCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCAc < 1:4989267/150‑1 (MQ=255) atcatcCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCAc < 1:3023609/150‑1 (MQ=255) tcCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACctgc < 1:390412/150‑1 (MQ=255) ccGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACctgct < 1:2004024/150‑1 (MQ=255) cGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACctgctg > 2:8707551/1‑150 (MQ=255) cGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACctgctg > 2:4274868/1‑150 (MQ=255) gCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGa < 1:1172555/150‑1 (MQ=255) cccTAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGAc < 2:6997320/150‑1 (MQ=255) cccGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGAc < 1:4664985/150‑1 (MQ=255) cccGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGAc < 1:6642639/150‑1 (MQ=255) cccGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGAc < 2:7357140/150‑1 (MQ=255) ccagAGCGCCGATTATGTCGTCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCATTGTAACCACTGTGCACCTGCTGAc < 2:7054429/147‑1 (MQ=255) ccGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCCCAAGCACCCGGCCGTGTAACCACTGTGCCACAGCTGaag > 1:1406018/1‑148 (MQ=255) cGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGc < 2:3070642/150‑1 (MQ=255) gcgcCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGGAAGCACCCGGCCTTGTAACCACTGTGCACCGGCTGACGccta > 2:4951477/1‑147 (MQ=255) cgcCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTc < 2:8617774/150‑1 (MQ=255) cgcCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTc < 2:7367647/150‑1 (MQ=255) gcCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGGCCCCGCCGGCACCCCGCCGTGTTACCACAGGGGCCCGGCGGACGCAATcg > 1:4388036/1‑150 (MQ=255) ccGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTcgc < 1:2273984/150‑1 (MQ=255) ccGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTcgc < 1:2634494/150‑1 (MQ=255) cGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGGGTGGCCGCGGATGGACCCGGGGGTGTAACCACTGTGGAACTGCTGGCGGATTagcg > 2:8320471/1‑150 (MQ=255) cGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTcgcg < 2:4475546/150‑1 (MQ=255) cGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTcgcg < 1:6945982/150‑1 (MQ=255) gAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCgg < 2:1736267/150‑1 (MQ=255) gAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCgg < 1:1596422/150‑1 (MQ=255) gAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCgg < 1:3414262/150‑1 (MQ=255) gAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCgg < 1:4450914/150‑1 (MQ=255) aGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCggg < 2:4339486/150‑1 (MQ=255) gTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGc < 2:7617231/150‑1 (MQ=255) aTGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCAc < 2:1373230/150‑1 (MQ=255) cGGCGTCGAACAGCGCCATTTCGTGCCGATCGAGCAGCGCTTAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCCCTGTGCACCTGCTGACGCATTCGCGGGCACGccc < 1:1734566/150‑1 (MQ=255) cGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGccc < 2:6322091/150‑1 (MQ=255) cGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCCAAAGCACCCCGCCATGTAAACACAGTGCACCAGCTGACGCAGTAGCGGGCACcccc > 2:2339729/1‑150 (MQ=255) ggCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCg < 2:3005376/150‑1 (MQ=255) gCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAAACACAGTGCACCAGCTGACGCATTAGCGGGCACGCCCGc > 2:713166/1‑150 (MQ=255) tCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGGACCCCGCCGTGTAAACACTGTGCAACATCAGAAGCAATAGCGGGCACGCCCGCTcc > 2:2414309/1‑150 (MQ=255) aGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGCAAGCACCCCGCCGTGTAACCAAAGTGCACCAGCAGACGCATTCGCCGGCCCGCCCCCCCCcccacg > 2:1558645/1‑148 (MQ=255) gcgcCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACA‑GGt > 2:2120003/1‑150 (MQ=255) cgcCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGGGGCCGCGCATGCACCCCGCCGGGGAACCAAGGTGCACCCGCAGACGCCTTCGCGGGCCCGCCCCCACCCACA‑AGTa > 1:4365026/1‑150 (MQ=255) ctgTTGGTGCCGATCGTGCCGCGCTGAATCGCTATCGAGAGGCAACCCGTTTCCCTGGTGGGCGCGGGGGTGCCCGCTAATGCCCCCGGCCTTGTAACAACTGTGCACCGGCTGACCAATTGGCGGGCACGCCCGCTCCCACA‑GGTACgg < 2:2511204/148‑1 (MQ=255) cgTTCGTGCCGAGCGTGCAGCGCTGAATCGCTATCGAGCGGCAACCGGTGTCCCGTGCGGGCGCGGGCGGGCCCGCGAATGCACCCGGCCTTGTAACCACGGTGCACCTGCTGCCGAATGCGCGGGCACGCCCGCTCCCACA‑GGTACGGt < 2:4149670/149‑1 (MQ=255) cGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTGGAGGGAGCGGGCGGGCCCGCGAATGCACCCGGCCTTGAAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACA‑GGTACGGTGaaa < 2:6556755/150‑1 (MQ=255) ccGAGCGCGCAGCGCGGAATAGCTATAGCGAGGCCACCCGGGGCCCTTGCGGGTGCGGGCGGGCCCGCGAATGCACCCGGCCTTGTCCCCACGGTGCACCGGCTGACGCATTCGCGGGCACGCCCGCTCCCACG‑GGTACGGTGAAACCtt < 2:6453616/150‑1 (MQ=255) cGATCGAGCCGCGCTGAATAGCTTTAGAGCGGCAACCCTTTTCCCTTGCGGGCGGGGGGGTGCCCGCGAAGGCCCCCGGCCTGGTACCCCCGGTCCACCGGCTGAGGCTTGCGGGGGCACGCCCGCTCCCACA‑GGTACGGTGAAACCTTc < 2:3138112/150‑1 (MQ=255) gagcGAGCAGCGCTGAATAGCTATAGCGAGGCACCCCGTTTCCCTTGAGGGAGCGGGCGGGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACA‑GGTACGGTGAAACCTTcc < 2:8601702/147‑1 (MQ=255) gATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGGGCCCCCGAAAGCAACCGGCCGTGTAAAAAAAGTTCACCAGCTTAAGCAATCGCGGGCACCCCCCCGCCCACA‑CGTACGGTGGAAACATcc > 2:901450/1‑150 (MQ=255) tGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCAACCGGCCATGTTAACACAGTGCACCTGCTGACCCATTCGCGGGCACGCCCGCTCCCACA‑GGTACGGTGAAAACTTCCGAATCCTGTGAcc > 2:1348866/1‑150 (MQ=255) aaTAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCGGCTGACGCCTTCGCGGGCACGCCCGCGCCCACA‑GGTACGGTGAAACCGTCCGAATCCTGTGACCgg > 2:5127135/1‑149 (MQ=255) ttgCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGAGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACA‑GGTACGGTGAAACCTTCCGAATCCTGTGACCGAGc < 2:3645304/148‑1 (MQ=255) tataGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCCCGCAAGCACCCCGCCGTGTAACCACTGTGCACCAGCTGGCGCCTTCGCGGGCACGCCCCCGCCCACA‑GGTAAGGAGAAACCGTCCGACTCCTGTGACCGAGCCTGa > 2:4577360/1‑150 (MQ=255) ataGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGGGCCCCCCCAAGCCCCCCCCCGGGGTACCACGGTGCCCCCGCGGCCGCCGTCGCCGGCCCCCCCCCGCCCACACGGAACGGGTAAACC‑TCCCAAACCCGGGACCGCGcccgct > 2:255099/1‑146 (MQ=255) gagagGCAACCCGTTTCCCTTGTGGGAGGGGGCGGGCCCGCTAATGCACCCGGCCTTGTAACCAGTGGGCACCGGCTGACGCTTTCGGGGGCACGCCCGCTCCCACA‑GGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTcc < 2:6238221/150‑1 (MQ=255) agagGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACA‑GGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCCGATTCCa < 2:5081352/150‑1 (MQ=255) gagGCAACCCGTTTCCCTTGTGGGTGGGGGGGTGCCCGCGTATGCACCCGGCCTTGTAACCTCTGTGCACCTGCTGACGCATTCGGGGGCACGCCCGCTCCCACA‑GGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCat < 2:3468576/150‑1 (MQ=255) gagGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACA‑GGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCat < 2:7206920/150‑1 (MQ=255) ggCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACA‑GGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCatga < 2:5869604/150‑1 (MQ=255) ggCAACCCGTGTCCCTTGAGGGAGCGGGCGTGCCCGCGACTGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACA‑GGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCatga < 2:8030182/150‑1 (MQ=255) gCACCCGGTTGCCCTTGTGGGTGGGGGCGTCCCCGCCAAGGCACCGGGCCTTGTACCCGGTGTGCACCTGCTGACGCTTTCGCGGGCACGCCCGCTCCCACA‑GGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCatgat < 2:4532692/150‑1 (MQ=255) gCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCgg > 2:810431/1‑85 (MQ=255) gCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCgg < 1:810431/85‑1 (MQ=255) tCCCTTGTGGGAGGGGGCGTGCCCGCTATTGCACCCGCCCTTTTAACCCCTGTCCACCTGCTGACGATTTCGCGGCCACGCCCGCTCCCACA‑GGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCa < 2:3767350/150‑1 (MQ=255) tCCCTGGAGGGAGCGGGCGGGCCCGCGAATGCCCCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACA‑GGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCa < 2:7901682/150‑1 (MQ=255) gggAGCGGGCGGGCCCGCGAAGGCACCCGGCGTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACA‑GGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCaa < 2:5272400/150‑1 (MQ=255) tcgCGGGCACGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCAGTCGCGGGCACGCCCGCTCCCACA‑GGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCCTGAGGAACACTGCATACCGCAAGc > 2:308945/3‑150 (MQ=255) gCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACA‑GGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCAc > 2:7289175/1‑150 (MQ=255) gggCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCAGTCGCGGGCACGCCCGCTCCCACA‑GGTACGGTGACACCTTCCGACTCCTGTGACCGAGCCTGATTCCATGATGAACCCTGCATACCGCAAGCACCt > 2:8544243/1‑150 (MQ=255) ggCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACA‑GGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTg > 1:8042051/1‑150 (MQ=255) tGCCCGCTAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCTTTCGCGGGCACGCCCGCTCCCACA‑GGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAg < 2:2642505/150‑1 (MQ=255) tGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACA‑GGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAg > 1:6789853/1‑150 (MQ=255) | GGCGGCGCACGTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACA‑GGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAG > NC_002947/2668862‑2669160 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |