| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,673,073 | C→A | 12.6% | intergenic (+99/‑68) | prpF → / → prpD | aconitate isomerase/2‑methylcitrate dehydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,673,073 | 0 | C | A | 12.6% | 492.0 / 44.7 | 177 | intergenic (+99/‑68) | prpF/prpD | aconitate isomerase/2‑methylcitrate dehydratase |
| Reads supporting (aligned to +/- strand): ref base C (87/66); new base A (14/10); total (101/76) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 182 total aligned reads displayed.
CTCGCGTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACA‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTACC > NC_002947/2672925‑2673222 | cTCGCGTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACA‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATcc < 1:2486685/150‑1 (MQ=255) tCGCGTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCACCCACA‑GGTA‑ATCACAGGGTTTGAATGCGGTGATATacc > 2:2206299/1‑150 (MQ=255) cgcgTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCCCACCCACA‑CGGA‑AACAAACCGGTTTAAAGCTGTGCTATcacg > 1:6614064/1‑147 (MQ=255) gcgTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACA‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCtg < 2:8668073/150‑1 (MQ=255) gTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACA‑GGTA‑ATCACAGCATTCAAACCCTGTGAT‑TACCTGTgg < 1:4916224/150‑1 (MQ=25) tGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCTGCTGTGCAGCCCTTCGCGGGCTTGCCCGCTCCCACA‑GGGATATCACAGCATTCAAACCCTGTGAT‑TACCTGTgg < 2:6346370/150‑1 (MQ=17) tGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACA‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTgg < 1:5187294/150‑1 (MQ=255) cTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACA‑GGGATATCACAGCATTCAAACCCTGTGAT‑TACCTGTGGGa < 2:8031394/150‑1 (MQ=18) tGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACA‑GGTA‑ATCACAGGGGTTGAATGCTGTGATATCCCGGTGGGAg > 2:1478553/1‑150 (MQ=255) gATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACA‑GGT‑‑ATCACAGCATTCAAACCCTGTGAT‑TACCTGTGGGAGCgg < 1:1777545/150‑1 (MQ=21) tGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACA‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCgg < 1:3084381/150‑1 (MQ=255) tGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACA‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCgg < 2:7377570/150‑1 (MQ=255) tGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACA‑GGGATATCACAGCATTCAAACCCTGTGAT‑TACCTGTGGGAGCgg < 2:7818233/150‑1 (MQ=18) tGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCCCGCCCCCA‑CGGA‑AACACAGGGTTTGAATGCGGGGCTATCCCGGGGGGAGCgg > 1:7107972/1‑150 (MQ=255) gAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACA‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGc < 2:1980104/150‑1 (MQ=255) gggCTGGGTTCGCGTGCCTGGCGATAGCTTCTAACGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACA‑GGGATATCACAGCATTCAAACCCTGTGAT‑TACCTGTGGGAGCGGGCaa < 1:8449119/150‑1 (MQ=17) gCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACA‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGc < 1:6458850/150‑1 (MQ=255) gTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACA‑GGTA‑ATCACAGGGTTTGAATTCTGTGATATACCGGTGGGAGCGGGCAAGCCcgcg > 2:1061464/1‑150 (MQ=255) gTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACA‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGTGCGGGCAAGCCcgcg > 2:8386696/1‑150 (MQ=255) gcgTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCACCCACA‑GGTA‑ATCACAGGGGTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGaacg > 2:1213880/1‑148 (MQ=255) gcgTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCCCTACCACA‑GGTA‑AAAACAGGGTTTGAAAGCGGTGATAAACCTGTGGGAGCGGGCAACCCCGCGAAgg > 2:3945009/1‑150 (MQ=255) gTGCCTGGCGATCGCTACTAAAGCACCACGGGCGCTCGGCTCCAAGCGGGGCCGCTTTGCGGCCCTTCGCGGGCTGGCCCGCTCCCCCA‑GGTA‑ATCCCTGGGTTTGACTGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGc < 2:3560846/150‑1 (MQ=37) gcccgggCGATCGCTAATAAAGCACCAGTGGCGGTCGGCTCCACGTGGGGCGGCTTTGCGGCCCTTCGCGGGCTTGCCCGCCCCCACC‑GGTA‑ACCACCGGGTTTGAATGCGGTGATAGCCGTGTGGGCGCGGGCACGCCCGCGAAGGGCt < 2:4573530/145‑1 (MQ=255) gCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACA‑GGTA‑ATCACCGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGAAAGCCCGCGAAGGGCTg < 2:2040176/150‑1 (MQ=255) ccTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACA‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGc > 2:8250300/1‑150 (MQ=255) gCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACA‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCtgtg > 1:2432908/1‑119 (MQ=255) gCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACA‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCtgtg < 2:2432908/119‑1 (MQ=255) cGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCACCCACA‑GGTA‑ATCCCAGGGTTTGAATGCTGTGATATCCCGGTGGGAGCGGGCAAGCCCGCGAAGGGCGGCAcagc > 2:2198684/1‑150 (MQ=255) aGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCGCCCACA‑GGTA‑ATCACAGGGGTTGTATGCTGTGATATCCCTGGGGGAGCGGGCAAGCCCGCGAAGGGCTGCACCGCAGcc > 2:3370791/1‑150 (MQ=38) cTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCGCCCACA‑GGTA‑ATAACAGGGTTTTTATGCTGTGATATACCGGTGGGAGCGGGCCAGCCCCCGAAGGGCTGCACAGCAGcccc > 2:2397193/1‑150 (MQ=37) tCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTGGCCCGCTCCCACA‑GGTA‑ATCACAGGGTTGGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCgg < 2:539944/150‑1 (MQ=255) tAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCCCA‑GGTA‑ATCACAGGGGTTGAATGCTGTGATATCCCGGTGGGCGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCa > 2:1582688/1‑150 (MQ=255) aaaGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACA‑GGTA‑ATCACAGGGGTTTAAAGCTGTGATAAACCGGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCCGCaa > 1:7932309/1‑150 (MQ=37) gCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACA‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTc > 2:2700757/1‑150 (MQ=255) caggggCGCTCGGCTACACGGGGGGCGGGTTGGCGGCCCTGGGGGGGCTGGCCGGCGCCCACC‑GTTA‑ATCACCGGGTTTTAAGGGTGTGATATCCGTGTGGTAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGaa < 1:7119329/146‑1 (MQ=255) cacTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACA‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCgg < 1:5813098/107‑1 (MQ=255) cacTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACA‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCgg < 1:5812365/107‑1 (MQ=255) cacTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACA‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCgg > 2:5813098/1‑107 (MQ=255) cGGCTGCAAGAGGGGCCGGTTTGCGGCCCTTGGCGGGCTTGCCCGCTCCCACA‑GTTA‑ATCACAGGGTTTGAATGCTGTTATATCCCTGTGGGAGCGGGCACGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGa < 2:6614064/150‑1 (MQ=38) ttCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCACCCACA‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATACCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGGGCTGGATATg > 2:6215556/1‑150 (MQ=255) acgagGGGCCGCTTGGCGGCCCTTCGCGGGCTTGCCCGCTCCCACC‑GGTA‑ATCACAGGGTTTGAATGCTGTGTTATCCCTGGGGTAGGGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAgc < 2:1886513/148‑1 (MQ=38) gCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACA‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACg > 2:5119573/1‑150 (MQ=255) cGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACA‑CGTA‑AACACAGGGTTTGAATGCTGTGATATCCCGGGGGGGGCGGGCACCCCCCCCAACGGCTGCACAGCAGCCCCGGCAAGTCTGAAGGGCGCTGGCTATGAGCCCCAACGtc > 2:5468455/1‑149 (MQ=255) gCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACA‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGGGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGCGCTGGATATGAGCGCCAACGTAg > 2:7880655/1‑150 (MQ=255) gCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACA‑GGTA‑ATCACAGGGTTTGAATGCGGGGAGATCCCGGGGGGAGCGGGCCAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCCCTTCTGACGGGAGCTGGATATGAGCGCCAACGtcg > 2:7880397/1‑148 (MQ=37) tttGCGGCCCTTCGGGGGCTGGCCCGCTCCCACC‑GCTA‑CACACCGGTTTTGAATGGGGTTATACCCCGGTGGGCGGGGGCACGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGAc < 1:3370791/150‑1 (MQ=255) ttggCGGCCCTTGGGGGGCTTGCCCGCACCCCCA‑TGTA‑ATCACCGGGTTTGAATGCTTTGATATCCCTGTGGGCGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGAc < 1:3504004/147‑1 (MQ=255) tgggCGGCCCTTCGCGGGCTTGCCCGCTCCCCCC‑GGTA‑ATCCCAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGAc < 2:7023825/147‑1 (MQ=255) tGCGCCCCTTCGGGGGCTGCCCCGCCCCCCCC‑TTAA‑ATCCCGGGTTTTGATTGCTGTCATATCCGTGGGGGCGCGGCCACGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCt < 1:8239793/150‑1 (MQ=255) cTTCGCGGGCTTGCCCGCGCCCACAGGGCT‑ATCACAGCATTCAAACCCGGTGAT‑TACCGGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCCACGTAGACCTCAACGAt > 2:506483/1‑150 (MQ=14) ggttGCCGGCTCCCACT‑GTTA‑ATCACTGTTTTTTATTGTTGTTATTGCCGTGTGGGTGGGGGAACGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGa < 1:5325411/148‑1 (MQ=255) gcgggCCCGCGCCCCCA‑GTTA‑TTCACCGGGTTTGAAGGCTGTGCTAGCCCGGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGa < 2:3654772/146‑1 (MQ=255) ttGCCCGCTCCCCCA‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCGGTGGGCGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCACTTCGGAAGGGAGCTGGATATGAGCGCCACCGTAGACCTCACCGATCGCCCGGCtt > 2:3049875/1‑150 (MQ=38) ttGCCCGCTCCCACA‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATCTGAGCGCCAACGTAGACCTCAACGATCGCCCGGAtt > 2:4841171/1‑150 (MQ=255) ttGCCCGCTCCCACA‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGAtt > 2:2882792/1‑150 (MQ=255) tGCCCGCTCCCACA‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTa < 2:6046271/150‑1 (MQ=255) gCCCGCTCCCACA‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTAc < 2:4286743/150‑1 (MQ=255) gCCCGCTCCCACA‑GGTA‑AACACTGGGTTTGATTGCTTTGATAGCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTAc < 2:449336/150‑1 (MQ=39) ccGCTCCCACA‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGa > 1:332676/1‑150 (MQ=255) ccGCTCCCACA‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGa > 2:1070832/1‑150 (MQ=255) ccGCTCCCACA‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGa > 1:6057027/1‑150 (MQ=255) ccGCTCCCACA‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGa > 2:8211635/1‑150 (MQ=255) gCTCCCACA‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGAcc > 1:2621857/1‑150 (MQ=255) tCCCACA‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCgg < 2:2105376/150‑1 (MQ=255) ccACA‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATCTGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGt > 2:4639919/1‑150 (MQ=255) ccACA‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGt > 1:4497434/1‑150 (MQ=255) ccACA‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGt > 2:8181808/1‑150 (MQ=255) ccACA‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGt > 1:2054438/1‑150 (MQ=255) ccACA‑GGTA‑ATCACAGGGTTTGAATGCTATGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGt > 1:7692554/1‑150 (MQ=255) caca‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTg > 2:6976076/1‑150 (MQ=255) acaGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCt > 1:7589261/1‑150 (MQ=255) acaGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCt > 2:476191/1‑150 (MQ=255) acaGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCt > 2:2528504/1‑150 (MQ=255) ctggttttGAATGCTGTGTTATCCCTGTGGGTGGGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTg < 2:5942817/145‑1 (MQ=255) ctgggTTGGAAGGCGGGGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTCCAAACCCTg < 2:3718132/148‑1 (MQ=39) caGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTg > 2:7737105/1‑150 (MQ=255) aGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTgg > 2:1561116/1‑150 (MQ=255) aGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTgg > 2:4120508/1‑150 (MQ=255) ggTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGAAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGcc > 2:5199971/1‑150 (MQ=255) tttGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGa < 2:3852009/150‑1 (MQ=255) tttGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGa > 1:3852009/1‑150 (MQ=255) gAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTa > 2:1267923/1‑150 (MQ=255) aaacccTGTGAT‑TACCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTAc > 1:1274694/6‑150 (MQ=255) aggCTGTGATATCCCTGTGGGAGCGGGCACGCCCGCGACGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACg < 2:5593810/148‑1 (MQ=255) aTGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACg > 1:6401428/1‑150 (MQ=255) tGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGc > 1:2920164/1‑150 (MQ=255) gCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGcc > 2:1778892/1‑150 (MQ=255) ccTGTGAT‑TACCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGccc > 2:320806/2‑150 (MQ=255) cTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGccc > 1:1326323/1‑150 (MQ=255) tgtgATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCt > 2:6369635/1‑150 (MQ=255) tgtgATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCt > 1:4062531/1‑150 (MQ=255) tgtgATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCt > 1:6820767/1‑150 (MQ=255) tgtgATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCt > 1:6658456/1‑150 (MQ=255) tttatatCCTTGTGGGCGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTc < 1:3438999/147‑1 (MQ=255) ttatatCCGTGTGGGAGCGGGCACGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCg < 1:512316/148‑1 (MQ=255) tgATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCg > 1:147168/1‑150 (MQ=255) gATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCgg > 1:4618721/1‑150 (MQ=255) atatCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGc > 1:7623849/1‑150 (MQ=255) tCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTAc > 2:2271757/1‑150 (MQ=255) cccTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTAcc > 2:7398808/1‑150 (MQ=255) | CTCGCGTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACA‑GGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTACC > NC_002947/2672925‑2673222 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |