| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,750,169 | A→C | 7.0% | intergenic (+20/+15) | PP_2399 → / ← PP_2400 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,750,169 | 0 | A | C | 7.0% | 745.6 / 26.1 | 256 | intergenic (+20/+15) | PP_2399/PP_2400 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (124/110); new base C (7/14); total (131/125) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.10e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 279 total aligned reads displayed.
GGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCGGTAATGGCATA > NC_002947/2750020‑2750318 | ggCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCgca < 1:6930367/150‑1 (MQ=255) gCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCgcag < 2:452632/150‑1 (MQ=255) gCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTACAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCgcag < 2:2570289/150‑1 (MQ=255) gTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCgcagca < 1:7289957/150‑1 (MQ=255) gTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCgcagca < 1:6336476/150‑1 (MQ=255) tATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGcagcag > 2:3782486/1‑150 (MQ=255) aTCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCagcagc < 2:6711607/150‑1 (MQ=255) tCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGcc > 1:8677121/1‑150 (MQ=255) cGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCTGCGCAGccc < 2:877967/150‑1 (MQ=255) gCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTCGGGGGCTGCTGCGCAGccccccaa < 2:4005136/150‑4 (MQ=255) ggggtggAGCTGGGTACCGTATGAGAGGGGGTGATGTCTTTGGGGGGTTTTGTGCAGATTGGGTTGTCATTGCTGTATGATTTTCGCGAGCTGGGTGTCTTT‑GTCGTAACAGTGTGATGGATTTGGGGGGCTGCGCAGCAGCCCCCGATc < 2:8300515/148‑1 (MQ=255) tggtggAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATcc > 1:3171185/1‑150 (MQ=255) aGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGcc < 2:8601859/150‑1 (MQ=255) ggggACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCg > 1:1705762/1‑150 (MQ=255) ggACCGGAAGAGAGCGGCTGCTGGCTTTGGGGGGGGTTGTGCAGCAAGGGTTGGAATTGCTGGAAGCATTTCGCGAGCTGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGaa < 2:2242810/150‑1 (MQ=255) cGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGc > 2:6041714/1‑150 (MQ=255) cGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGc > 2:6805085/1‑150 (MQ=255) ggAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCa > 2:6548128/1‑150 (MQ=255) ggAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCa > 2:4175999/1‑150 (MQ=255) ggAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCa > 1:4845279/1‑150 (MQ=255) gAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCAt > 1:8552522/1‑150 (MQ=255) gagagCGGCTGCAGGCATTGGGCGGGGATGTGTAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCt > 2:1458357/1‑150 (MQ=255) gagCGGCTGCAGGATTTGGGGGGGGATGTGCCGCATGGGTTGGCATTGCTGGAAGCTTTTCGCGAGCCGGGTGTCATT‑GTCGGAACAGTGTGACGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCa < 2:6710892/150‑1 (MQ=255) ggCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCa > 1:3771807/1‑150 (MQ=255) cTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAAt > 1:443604/1‑150 (MQ=255) tGCAGGCTTTGGGCGGGGTTGTGCAGCATGGTTTGGCTTTGCTGTAAGATTTTCGCGAGCTGGGTGTATTT‑GTCGTAACTGTGTGACGGCTTTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATg < 1:4150134/150‑1 (MQ=255) cggcaggggggggggTTGTGCAGCATGGGTTGGCATGGCTGGAAGAATTTCGCGAGCCGGGTGACCTG‑GTCGTACCTGTGTGCTGGCATGGGGGGGCTGCGCAGCACCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATc < 1:6014412/143‑1 (MQ=255) gCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGa < 2:2150646/150‑1 (MQ=255) gCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGa < 1:8812572/150‑1 (MQ=255) cgtGGGGGGGGATGGCCAGCTCGGGTTGGCATGGCGGCACCCTTTGCGCGCGCCGGGTGACCGG‑GGCGGACCAGTGTGACGGCCTGGGGGGGCGGCGCAGCCCCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAgg < 1:347726/148‑1 (MQ=255) agtGGGGGGGGTGGTGCCGCACGGTTTGGCTGTGCTGCAAGCATTGCGCGCGCGGGGTGTCTTG‑GTCGCACCTGTGTGACGGCTTGGGGGGGCTGCGCCCCCGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAgg < 1:356452/148‑1 (MQ=255) aTTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAgg > 1:5259623/1‑150 (MQ=255) aTTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAgg > 2:5245738/1‑150 (MQ=255) ggggggATGTGCTGCTTGGGTTGGCTTTGCTGGACGCATTTCGCGAGCTGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAg < 2:2721764/148‑1 (MQ=255) gCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAg > 1:500496/1‑150 (MQ=255) gCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAg < 2:3528395/150‑1 (MQ=255) ggATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAggcgc < 2:7721296/150‑1 (MQ=255) ggATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAggcgc > 1:1364097/1‑150 (MQ=255) gATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAggcgcc < 2:6111265/150‑1 (MQ=255) ttgtgCAGCTTGGGTTGGCTTTGCGGGACGCTTTTCGGGCGC‑GGGGGTTATTGGGCGGAACCGTGTCATGGCTTGGGGGGGCGGCGCCGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAggcgccc < 1:5876592/149‑1 (MQ=255) gcagcaAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAggcgcccggcg > 2:2701403/1‑150 (MQ=255) cagcaAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAggcgcccggcgc > 2:4989791/1‑150 (MQ=255) cagcaAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAggcgcccggcgc > 2:3433303/1‑150 (MQ=255) cagcaAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAggcgcccggcgc > 1:549856/1‑150 (MQ=255) agcaTGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGTTGTCATT‑GTCGGAACAGTGTGAAGGCTTTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAggcgcccggcgcc < 1:4348876/150‑1 (MQ=255) gctaGGGTTGGAATTGCTGGAAGCATTTCGCGAGCTGGGTGTCATT‑GTGGGAACAGTGTGAAGGCATGGGGGGGCGGCGCCGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAggcgcccggcgccc < 2:3665584/147‑1 (MQ=255) gcaAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAggcgcccggcgccc < 2:1652393/150‑1 (MQ=255) gaatgggTTGGCTTTGCTGGAAGCTTTTCGCGAGCGGGGTGTCTTG‑GTCGGAACTGTGTGATGGATTGGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAggcgcccggcgccc < 1:1885730/146‑1 (MQ=255) atgggTTGGCTTTGGTGGAAGCTTTTCGCTAGCTGGGTTTATTT‑GTCGTAACTGTGTGACGGCTTGGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCtt < 1:6800600/148‑1 (MQ=255) acgggTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTTAAGGCATTGGGGGGCTGCGCCGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCtt < 2:2415781/148‑1 (MQ=255) aaGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCTAGGCTAAggcgccgggcgcctta < 2:7142301/150‑4 (MQ=255) aaGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCtt < 2:7881450/150‑1 (MQ=255) gggTTGGCTTTGCTGGAAGAATTTCGCGAGCTGGGTGTCATG‑GTCGGAACAGTGTGATGGCTTTGGGGGGCGGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGa < 1:2370953/150‑1 (MQ=255) gggTTGGCATTGCTGGACGCATTTCGCGCGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGa < 1:2754901/150‑1 (MQ=255) gggTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGACGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAggcgccgggcgccttagc < 2:8229308/150‑6 (MQ=255) ggTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCTTTGGGGGGCGGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGag < 2:5401253/150‑1 (MQ=255) aTTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACCGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGt < 2:7020116/150‑1 (MQ=255) aTTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGt > 1:5293654/1‑150 (MQ=255) cTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGgca > 2:5582213/1‑150 (MQ=255) cTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGgca < 2:1235190/150‑1 (MQ=255) gAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGgcagca > 2:2989166/1‑150 (MQ=255) gAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGgcagca > 2:7390497/1‑150 (MQ=255) gAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGgcagca > 2:1819911/1‑150 (MQ=255) aaGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCaa < 2:2807100/150‑1 (MQ=255) aTTTCGCGAGCCGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGcc < 2:7449316/150‑1 (MQ=255) aTTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGACGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGcc < 2:3290664/150‑1 (MQ=255) tttCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGccc > 1:8116887/1‑149 (MQ=255) cgAGCAGGGTGTCTTT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAgg < 2:8485992/150‑1 (MQ=255) gAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGt > 1:3412035/1‑150 (MQ=255) gAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGt < 2:4720288/150‑1 (MQ=255) gCAGGGTGTCATT‑GTCGGAACCGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAg < 2:3915207/150‑1 (MQ=255) gggTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATc > 2:5097539/1‑150 (MQ=255) ggTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCTGGTAGATCa > 2:1229280/1‑150 (MQ=255) ggTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCa < 2:431696/150‑1 (MQ=255) tgtCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGc > 1:2506721/1‑150 (MQ=255) tgtCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGc < 2:3041151/150‑1 (MQ=255) gtCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCg < 1:6590055/150‑1 (MQ=255) aTT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCa > 1:7519286/1‑150 (MQ=255) t‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAAc < 2:4876693/150‑1 (MQ=255) gAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACGTGTa > 1:7825676/1‑150 (MQ=255) aGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTg > 2:8344029/1‑150 (MQ=255) aGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTg > 1:7799090/1‑150 (MQ=255) atggCTTTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGGAg < 1:8239732/148‑1 (MQ=255) ggCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGcc < 1:497562/150‑1 (MQ=255) aTTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTg > 1:6858058/1‑150 (MQ=255) aTTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTGGAGCAGCAGTGGCAGCAACGCCACCCGGTAGATCCGCGGCAACTTGGCCTTGCCGGAGcccgg > 1:6449501/1‑148 (MQ=255) ttGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTgg < 2:1918096/150‑1 (MQ=255) ggggggCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTc > 1:7676921/1‑150 (MQ=255) ggggggCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTc < 1:3289582/150‑1 (MQ=255) ggggCTGCTGCGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCgg > 1:2839/1‑150 (MQ=255) ggggCTGCTGCGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCgg > 1:5800203/1‑150 (MQ=255) ggggCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCgg < 2:5259746/150‑1 (MQ=255) gggCTGCTGCGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCGGt > 1:6132378/1‑150 (MQ=255) gggCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCGGt < 2:3171185/150‑1 (MQ=255) cTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCGGTAAt < 1:2151583/150‑1 (MQ=255) tGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCGGTAATg < 1:3960505/150‑1 (MQ=255) tGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCGGTAATg < 1:1250645/150‑1 (MQ=255) cgcAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCGGTAATGGc > 1:3073553/1‑150 (MQ=255) gcagcaGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCATGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCGGTAATGGCa > 2:3856413/1‑150 (MQ=255) agcagcCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCGGTAATGGCATa < 1:7995821/150‑1 (MQ=255) | GGCGTATCGGTTGCTGGTGGAGCAGGGGACCGGAAGAGAGCGGCTGCAGGCATTGGGCGGGGATGTGCAGCAAGGGTTGGCATTGCTGGAAGCATTTCGCGAGCAGGGTGTCATT‑GTCGGAACAGTGTGAAGGCATTGGGGGGCTGCGCAGCAGCCCCCGATCCTCATCTGCCGAACCGCATGCTCAGCCAATGATCGAGGCTAAGGCGCCCGGCGCCCTTGAGCAGCAGTGGCAGCAACGCCACCAGGTAGATCAGCGGCAACTTGTAATTGCCGAAGCCCTGGTCGGTAATGGCATA > NC_002947/2750020‑2750318 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |