| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,761,828 | A→C | 7.3% | intergenic (+15/+18) | czcA‑II → / ← PP_2411 | cation efflux system protein/MFS transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,761,828 | 0 | A | C | 7.3% | 1014.1 / 46.8 | 302 | intergenic (+15/+18) | czcA‑II/PP_2411 | cation efflux system protein/MFS transporter |
| Reads supporting (aligned to +/- strand): ref base A (151/129); new base C (8/14); total (159/143) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.25e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01 | |||||||||||
Only 100 of 307 total aligned reads displayed.
CCGGGGCAGAGGTGCAGCGGCCACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCACCACCAGGTAGAACGC > NC_002947/2761680‑2761977 | ccgggGCAGAGGTGCAGCGGCCACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCaa < 2:2583552/150‑1 (MQ=255) ggggCAGAGGTGCAGCGGCCACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAgg > 2:4555834/1‑150 (MQ=255) gggCAGAGGTGCAGCGGCCACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGc > 1:1851577/1‑150 (MQ=255) gCAGAGGTGCAGCGGCCACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAg > 2:3099570/1‑150 (MQ=255) gCAGAGGTGCAGCGGCCACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAg < 2:5652312/150‑1 (MQ=255) cAGAGGTGCAGCGGCCACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGc < 2:778144/150‑1 (MQ=255) agGTGCAGCGGCCACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCCTTGCAGcccc < 2:6930161/150‑1 (MQ=255) aGCGGCCACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCaacaac < 2:4987177/150‑1 (MQ=255) ggggCCACTGGCGACGGTGGTTTTTGGCGTATTCTTTTCTTCTACCGCGCTGACTTTGCTGGTGTTGCGGGGGTTGTTTCTGTGGGCGTATCGGCGGGATGAGCAGCTGGAAGGCTGAGATTTTGGGGCTGCATGCCAGCCCCAACAAcc < 2:4476866/148‑1 (MQ=255) ggCCACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCTGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTc < 2:3766003/150‑1 (MQ=255) cACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGTAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCaaa > 1:6121975/1‑150 (MQ=255) cTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTTTCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACg < 2:3345344/150‑1 (MQ=255) tGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACgg > 1:799542/1‑150 (MQ=255) tGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACgg > 2:837198/1‑150 (MQ=255) ggCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGc < 2:112831/150‑1 (MQ=255) gggtggtTTTGGGCGTATTTTTTTCTTCTACCGGGCTGTGTTTGCGGGTGTGGCGGGGTTTGTACCGGTGGGGTTTTCGGCGGTTTGAGAAGATGGTTGGCTGTGATTTTGGGGCTGCATGGCAGCCCCAACAACCTCAAACGGCCCTTc < 1:757522/149‑1 (MQ=255) gtggtgATTGGCGTAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTTTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCgg < 1:5333412/150‑1 (MQ=255) gtggtgATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCgg > 1:387373/1‑150 (MQ=255) gtggtgATGGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCgg < 2:4708424/150‑1 (MQ=255) tggtgATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCggg < 2:7675363/150‑1 (MQ=255) tggtgATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCggg > 1:8765997/1‑150 (MQ=255) ttaTTGGGGGATTTTTGTCTTCTACCGCGGTGAGGTTGCTGGTGTTGCGGGGGTTGTATCTGTGGGCTTATGGGGGGTTTGCGCTGCTGGATGGCTTAGATTTTGGGGCTGCATGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCAc < 1:3657093/148‑1 (MQ=255) aTTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCa < 1:6583649/150‑1 (MQ=255) gCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGccc > 1:1476570/1‑150 (MQ=255) aTCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGcaca > 2:5912149/1‑150 (MQ=255) cTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACAcc < 2:1669762/150‑1 (MQ=255) ttGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCg > 2:321887/1‑150 (MQ=255) gTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTc < 2:6087733/150‑1 (MQ=255) gTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCACCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTc < 1:7276935/150‑1 (MQ=255) tcttctACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTcc > 2:3457294/1‑150 (MQ=255) ttctACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCcac > 2:2391773/1‑150 (MQ=255) ttctACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCcac > 2:7226610/1‑150 (MQ=255) ttctACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCcac > 2:150103/1‑150 (MQ=255) ttctACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCcac > 1:4010013/1‑150 (MQ=255) tcaaCCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCcaca > 2:534792/4‑150 (MQ=255) aCCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACAccc > 2:7184880/1‑150 (MQ=255) aCCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACAccc > 2:1747694/1‑150 (MQ=255) ccGGGCTGACGTTGGTGGTGTTGCCGGCGTTGTAGCCGTGGGCTTATCGGCGGGATGAGCAGCAGGATGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCa < 1:8160422/150‑1 (MQ=255) ccGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCa > 1:4847618/1‑150 (MQ=255) tGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGgtcgt > 2:2546750/1‑150 (MQ=255) gACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGgtcgtc < 2:5050067/150‑1 (MQ=255) aCGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCa < 2:3927720/150‑1 (MQ=255) gTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATg > 1:4072773/1‑150 (MQ=255) gCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCaa > 1:4637277/1‑150 (MQ=255) cTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCaaa < 1:1921755/150‑1 (MQ=255) tGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAg > 1:7214343/1‑150 (MQ=255) tGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAg > 2:4243588/1‑150 (MQ=255) ggTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGa < 2:6419814/150‑1 (MQ=255) gtTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAAt > 1:1320223/1‑150 (MQ=255) gtTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAAt > 1:2838903/1‑150 (MQ=255) ttGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATc > 2:6722290/1‑150 (MQ=255) gCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCcg > 1:1186999/1‑150 (MQ=255) ggCGTTGTTTCAGTGGGCGTATCGGCGGGATTAGCAGCTGGATGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGa < 1:5917310/150‑1 (MQ=255) ggCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGa > 1:7897741/1‑150 (MQ=255) ggCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGa > 1:709450/1‑150 (MQ=255) gTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACACACGTCGTCATGCAAAGAAATCCGCGACGt > 2:8537790/1‑150 (MQ=255) gTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTc > 1:2069403/1‑150 (MQ=255) gTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTc > 1:2210584/1‑150 (MQ=255) gTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTc > 2:4012480/1‑150 (MQ=255) tCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCgg < 2:1320223/150‑1 (MQ=255) tCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCgg > 1:7362468/1‑150 (MQ=255) cAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGc > 1:5688218/1‑150 (MQ=255) tGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACTACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAAc < 2:1851577/150‑1 (MQ=255) gggCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCACGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTcc < 2:7455306/104‑1 (MQ=255) gggCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCACGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTcc > 1:7455306/1‑104 (MQ=255) gggCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACg < 2:5554891/150‑1 (MQ=255) ggCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGc < 1:4302399/150‑1 (MQ=255) gCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGcc < 2:8005077/150‑1 (MQ=255) ggcggGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGc < 2:8228016/150‑1 (MQ=255) gATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCccacc > 2:5706790/1‑150 (MQ=255) tGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCccaccac > 1:1733896/1‑149 (MQ=255) tGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCaa < 1:1698518/150‑1 (MQ=255) tGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCaa > 2:1262616/1‑150 (MQ=255) tGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCaa > 1:4992725/1‑150 (MQ=255) gcagcaGGAAGGCTTAGAATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGc < 1:2394606/150‑1 (MQ=255) gcagcaGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGc < 1:4435281/150‑1 (MQ=255) gcagcaGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGc < 1:1019404/150‑1 (MQ=255) cagcagGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGcc < 1:643950/150‑1 (MQ=255) cagGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCAGCACACCGTCAACACCCAGGTCGTCATGCAAAGAACTCCGCGACGTTACCGGCAACGCCAAACCGCCCACCAACGccacc > 2:752183/1‑150 (MQ=255) agGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGccacca > 1:7824556/1‑150 (MQ=255) gAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAgc > 2:5214946/1‑150 (MQ=255) gAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAgc > 1:7690181/1‑150 (MQ=255) aGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAgcgc > 2:2042681/1‑150 (MQ=255) gCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCaa < 1:391447/150‑1 (MQ=255) tGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATc > 1:5410117/1‑150 (MQ=255) tGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATc > 2:6517437/1‑150 (MQ=255) tGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATc > 1:2277080/1‑150 (MQ=255) tGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATc > 1:583399/1‑150 (MQ=255) gAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCatcaa < 2:8611113/150‑5 (MQ=255) gAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATca > 1:5504582/1‑150 (MQ=255) gAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATca > 1:3434444/1‑150 (MQ=255) aGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATcac < 2:6506598/150‑1 (MQ=255) cATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATcacca < 1:2691006/150‑1 (MQ=255) ttGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCAccacca < 2:7306564/150‑1 (MQ=255) ttGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCAccacca < 2:2629517/150‑1 (MQ=255) tGGGGCTGCCTTGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCCGCGCAATCACCACCAg > 1:3153062/1‑150 (MQ=255) cTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCACCACCAGGTAGa > 1:5746652/1‑150 (MQ=255) cTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCACCACCAGGTAGa > 1:5084791/1‑150 (MQ=255) tGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCACCACCAGGTAGaa > 1:937669/1‑150 (MQ=255) gCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCACCACCAGGTAGAAc > 1:6687775/1‑150 (MQ=255) | CCGGGGCAGAGGTGCAGCGGCCACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCACCACCAGGTAGAACGC > NC_002947/2761680‑2761977 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |