BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	2,781,104	G→C	5.1%	A153A (GCG→GCC) ‡	sotB →	sugar efflux transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,781,104	0	G	C	5.1%	1039.2 / 30.9	316	A153A (GCG→GCC) ‡	sotB	sugar efflux transporter
Reads supporting (aligned to +/- strand): ref base G (147/152); new base C (7/10); total (154/162)
Fisher's exact test for biased strand distribution p-value = 6.21e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.56e-01

Only 100 of 327 total aligned reads displayed.

ATTGTCAGCCACTTGCTGTCCTGGCTTTCGCAAAGCTTCGCCATGCTGCTGGTCAGCCGCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGCGTATCACGTTCCTGAGCATTGCCGGGGTAGCGCTAGCCACCATGCTTTGCCTGATCAAATCGCT  >  NC_002947/2780955‑2781253

aTTGTCAGCCACTTGCTGTCCTGGCTTTCGCAAAGCTTCGCCATGCTGCTGGTCAGCCGCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGgcg                                                                                                                                                       >  1:875912/1‑150 (MQ=255)

aTTGTCAGCCACTTGCTGTCCTGGCTTTCGCAAAGCTTCGCCATGCTGCTGGTCAGCCGCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGgcg                                                                                                                                                       >  2:5187949/1‑150 (MQ=255)

 ttGTCAGCCACTTGCTGTCCTGGCTTTCGCAAAGCTTCGCCATGCTGCTGGTCAGCCGCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCCGCAGGCCAAGgcgc                                                                                                                                                      >  1:2274400/1‑150 (MQ=255)

  tGTCAGCCACTTGCTGTCCTGGCTTTCGCAAAGCTTCGCCATGCTGCTGGTCAGCCGCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCt                                                                                                                                                     <  2:7071066/150‑1 (MQ=255)

   gTCAGCCACTTGCTGTCCTGGCTTTCGCAAAGCTTCGCCATGCTGCTGGTCAGCCGCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTg                                                                                                                                                    <  1:4090814/150‑1 (MQ=255)

   gTCAGCCACTTGCTGTCCTGGCTTTCGCAAAGCTTCGCCATGCTGCTGGTCAGCCGCATCGGCAGTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTg                                                                                                                                                    <  2:2025247/150‑1 (MQ=255)

    tCAGCCACTTGCTGTCCTGGCTTTCGCAAAGCTTCGCCATGCTGCTGGTCAGCCGCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTgg                                                                                                                                                   <  1:8329295/150‑1 (MQ=255)

    tCAGCCACTTGCTGTCCTGGCTTTCGCAAAGCTTCGCCATGCTGCTGGTCAGCCGCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTgg                                                                                                                                                   <  2:8496469/150‑1 (MQ=255)

     cAGCCACTTGCTGTCCTGGCTTTCGCAAAGCTTCGCCATGCTGCTGGTCAGCCGCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTggg                                                                                                                                                  <  1:848288/150‑1 (MQ=255)

        ccACTTGCTGTCCTGGCTTTCGCAAAGCTTCGCCATGCTGCTGGTCAGCCGCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCct                                                                                                                                               <  2:8766423/150‑1 (MQ=255)

           cTTGCTGTCCTGGCTTTCGCAAAGCTTCGCCATGCTGCTGGTCAGCCGCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCctgct                                                                                                                                            >  1:3467671/1‑150 (MQ=255)

           cTTGCCGTCCTGGCTTTCGCAAAGCTTCGCCATGCTGCTGGTCAGCCGCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCctgct                                                                                                                                            <  2:7768819/150‑1 (MQ=255)

            ttGCTGTCCTGGCTTTCGCAAAGCTTCGCCATGCTGCTGGTCAGCCGCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCctgctg                                                                                                                                           <  1:2779624/150‑1 (MQ=255)

            ttGCTGTCCTGGCTTTCGCAAAGCTTCGCCATGCTGCTGGTCAGCCGCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCGGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCCAGCGCCTTGGCctgctg                                                                                                                                           <  2:8168271/150‑1 (MQ=255)

                  tCCTGGCTTTCGCAAAGCTTCGCCATGCTGCTGGTCAGCCGCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCcccc                                                                                                                                     >  1:1425054/1‑150 (MQ=255)

                  tCCTGGCTTTCGCAAAGCTTCGCCATGCTGCTGGTCAGCCGCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCAcc                                                                                                                                     >  1:6352143/1‑150 (MQ=255)

                     tGGCTTTCGCAAAGCTTCGCCATGCTGCTGGTCAGCCGCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGt                                                                                                                                  >  1:7914936/1‑150 (MQ=255)

                      ggCTTTCGCAAAGCTTCGCCATGCTGCTGGTCAGCCGCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGta                                                                                                                                 <  1:5968837/150‑1 (MQ=255)

                             gCAAAGCTTCGCCATGCTGCTGGTCAGCCGCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCt                                                                                                                          >  1:6095994/1‑150 (MQ=255)

                             gCAAAGCTTCGCCATGCTGCTGGTCAGCCGCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCt                                                                                                                          >  1:7313788/1‑150 (MQ=255)

                             gCAAAGCTTCGCCATGCTGCTGGTCAGCCGCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCACCAGGCCAAGGCGCTGGGCCGGCTGGCCACCCGTACAAccca                                                                                                                          >  1:7523597/1‑149 (MQ=255)

                               aaaGCTTCGCCATGCTGCTGGTCAGCCGCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTgg                                                                                                                        >  2:67273/1‑150 (MQ=255)

                                aaGCTTCGCCATGCTGCTGGTCAGCCGCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGc                                                                                                                       <  2:7161964/150‑1 (MQ=255)

                                    ttCGCCATGCTGCTGGTCAGCCGCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCAGGGCCTGCTGGCCACCGGTACTACCCAGGCCATg                                                                                                                   >  2:163107/1‑150 (MQ=255)

                                    ttCGCCATGCTGCTGGTCAGCCGCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAACGCGCTGGGCCGGCTGGCCACCCGTACTACCCAGGCCaag                                                                                                                   >  1:1044080/1‑148 (MQ=255)

                                      cGCCATGCTGCTGGTCAGCCGCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGt                                                                                                                 <  1:7703941/150‑1 (MQ=255)

                                       ccgaTGCGGCTGACCAGCAGCAT‑GGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTcc                                                                                                               >  1:614609/4‑150 (MQ=255)

                                         cATGCTGCTGGTCAGCCGCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCGGGGCCGGCTGGCCACCGGGACTACCCTGGCCATGGTCCt                                                                                                              >  1:494141/1‑150 (MQ=255)

                                         cATGCTGCTGGTCAGCCGAATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCt                                                                                                              <  1:8181705/150‑1 (MQ=255)

                                          aTGCTGCTGGTCAGCCGCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTg                                                                                                             <  1:2169355/150‑1 (MQ=255)

                                          aTGCGGCTGACCAGCAGCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTg                                                                                                             >  2:2067507/1‑150 (MQ=255)

                                           tgctgcTGGTCAGCCGCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTgg                                                                                                            <  2:1342975/150‑1 (MQ=255)

                                               gctgaccagcagCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACAACCCTGGGCAGGGGGCTGGGCaa                                                                                                        >  2:5937216/7‑149 (MQ=255)

                                                ctgGTCAGCCGCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCGGCTGGCCCCCGGTACTACCCTGGCCATGGTCCTGGGCCTc                                                                                                       >  2:1465458/1‑150 (MQ=255)

                                                 tgGTCAGCCGCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCAGCTGGCCACCGGTACTACCCAGGCCATGGTCCTGGGCAtac                                                                                                      >  1:5657035/1‑148 (MQ=255)

                                                     cAGCCGCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCt                                                                                                  <  2:4584713/150‑1 (MQ=255)

                                                       gCCGCATCGGCAGTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTgg                                                                                                <  2:4938358/150‑1 (MQ=255)

                                                        ccGCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCCAGCGCCTTGGCCTGCTgg                                                                                                                                          <  2:2887568/107‑1 (MQ=38)

                                                            aTCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCCCCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCgt                                                                                           <  1:5340910/150‑1 (MQ=255)

                                                            aTCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCgt                                                                                           <  2:3360194/150‑1 (MQ=255)

                                                             tCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCgtg                                                                                          <  2:7622750/150‑1 (MQ=255)

                                                             tCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCGGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCgtg                                                                                          <  2:3811722/150‑1 (MQ=255)

                                                                gCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTgtgg                                                                                       >  2:437555/1‑150 (MQ=255)

                                                                  aTTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTgtggtg                                                                                     >  2:4769143/1‑150 (MQ=255)

                                                                  aTTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCAGTgtggtg                                                                                     <  1:6897730/150‑1 (MQ=255)

                                                                      cccTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCCAGCGCCTTGGCctgctg                                                                                                                                           <  2:2609593/92‑1 (MQ=37)

                                                                      cccTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCg                                                                                 >  1:3566351/1‑150 (MQ=255)

                                                                       ccTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGa                                                                                <  1:1279765/150‑1 (MQ=255)

                                                                       ccTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGa                                                                                <  1:8733508/150‑1 (MQ=255)

                                                                       ccTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGa                                                                                >  2:4435237/1‑150 (MQ=255)

                                                                       ccTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGa                                                                                <  2:8610072/150‑1 (MQ=255)

                                                                       ccTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGa                                                                                <  1:5498143/150‑1 (MQ=255)

                                                                        cTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAg                                                                               <  2:6400103/150‑1 (MQ=255)

                                                                         tGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAgg                                                                              <  1:1707886/150‑1 (MQ=255)

                                                                             gcATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCACCCCGCCAAGGCGCAGGGCCGGCTGGCCACCCGGACTACCCAGGCCAGGGGCCGGGGCAACCCCCGGGGCCGGGTGGTGGGCGAGGCAcg                                                                          >  1:3866521/1‑149 (MQ=255)

                                                                              cATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTg                                                                         <  1:2581119/150‑1 (MQ=255)

                                                                                   ggTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTg                                                                    <  2:5609373/150‑1 (MQ=255)

                                                                                   ggTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCAGGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTg                                                                    <  2:6886438/150‑1 (MQ=255)

                                                                                     tgtTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCCTCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGc                                                                  <  2:8418869/150‑1 (MQ=255)

                                                                                     tgtTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGc                                                                  <  1:3662361/150‑1 (MQ=255)

                                                                                          tGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCCGGCCAAGGCGCTGGGCCGGCGGGGCACCGGGACTACCCAGGCCCAGGGCCTGGGCATCCCGCGGGGCCGGGGGGGGGGCGAGGCCCGGGGCTGGCGGATc                                                             >  1:6613126/1‑150 (MQ=255)

                                                                                          tGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCCAGCCGCTGGGCCGGCTGGCCACCCGGAATACCCAGGCCAACGGGCTGGGCAACCCGCTGGGCCGTGTGGTGGGCCAGCCACAGCGCGGGCCTATc                                                             >  1:1891399/1‑150 (MQ=255)

                                                                                          tGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGGACTACCCTGGCCATGGTCCTGGGCCTCCCGCTGGGCCGTGTGGTGGGCGAGGCCCTGGGCTGGCGTATc                                                             >  2:5548006/1‑150 (MQ=255)

                                                                                          tGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCGGCTGGCCACCGGTACAACCCTGGCCATGGTCCTGGGCAACCCGCTGGGCCGGGTGGTGGGCGAGGCACTGGGCTGGCGTATc                                                             >  1:6335358/1‑150 (MQ=255)

                                                                                            gTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGCGTATCAc                                                           <  2:3497634/150‑1 (MQ=255)

                                                                                            gTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGGCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGCGTATCAc                                                           <  2:2704449/150‑1 (MQ=255)

                                                                                            gTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCCCTGGGCCTGCTGGCCACCGGTACTACCCAGGCCAAGGTCCAGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGCGTATCAc                                                           >  2:5414835/1‑150 (MQ=255)

                                                                                               cATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGCGTATCACGtt                                                        >  2:3550569/1‑150 (MQ=255)

                                                                                                    ccGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGCGTATCACGTTCCTGa                                                   <  1:6683760/150‑1 (MQ=255)

                                                                                                     cGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCGGGGCCGGCTGGCCACCGGTACGACCCTGGGCATGGTCCTGGGCCTCCCCCTGGGCCGTGTGGGGGGCGAGGCCCGGGGCTGGCGGTTCAAGTTCCagag                                                  >  1:2632909/1‑150 (MQ=255)

                                                                                                         tCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGCGTATCACGTTCCTGAGCAtt                                              <  1:8003999/150‑1 (MQ=255)

                                                                                                           gCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGCGTATCACGTTCCTGAGCATTGc                                            <  2:2975091/150‑1 (MQ=255)

                                                                                                            ccggCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGCGTATCACGTTCCTGAGCATTGcc                                           >  1:5855620/3‑150 (MQ=255)

                                                                                                             tGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGCGTATCACGTTCCTGAGCATTGCCg                                          <  2:6308772/150‑1 (MQ=255)

                                                                                                              ggCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGCGTATCACGTTCCTGAGCATTGCCgg                                         <  1:3096081/150‑1 (MQ=255)

                                                                                                              ggCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGCGTATCACGTTCCTGAGCATTGCCgg                                         <  2:244055/150‑1 (MQ=255)

                                                                                                               gCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGCGTATCACGTTCCTGAGCATTGCCggg                                        <  1:8659283/150‑1 (MQ=255)

                                                                                                               gCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGCGTATCACGTTCCTGAGCATTGCCggg                                        >  2:6554883/1‑150 (MQ=255)

                                                                                                               gCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCAGGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGCGTATCACGTTCCTGAGCATGGCCggg                                        <  2:6984481/150‑1 (MQ=255)

                                                                                                                  gTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGCGTATCACGTTCCTGAGCATTGCCGGGGTa                                     <  2:7278244/150‑1 (MQ=255)

                                                                                                                   tGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGCGTATCACGTTCCTGAGCATTGCCGGGGTAg                                    <  1:3395328/150‑1 (MQ=255)

                                                                                                                    gCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGCGTATCACGTTCCTGAGCATTGCCGGGGTAgc                                   <  1:1122297/150‑1 (MQ=255)

                                                                                                                    gCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGCGTATCACGTTCCTGAGCATTGCCGGGGTAgc                                   <  2:4221780/150‑1 (MQ=255)

                                                                                                                      gtgtGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGCGTATCACGTTCCTGAGCATTGCCGGGGTAgcgc                                 <  2:309324/150‑1 (MQ=255)

                                                                                                                       tgtgGCGCCGCCGGGCCAGCACGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGGGGTGGGCGAGGCACTGGGCTGGCGTATCACGTTCCTGAGCATTGCCGGGGTAGCGCt                                >  2:4636758/1‑150 (MQ=255)

                                                                                                                        gtgGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGCGTATCACGTTCCTGAGCATTGCCGGGGTAGCGCTa                               >  2:6247400/1‑150 (MQ=255)

                                                                                                                        gtgGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCGGCTGGCCCCCGGTACTACCCAGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGGGGTGGGCGAGGCACTGGGCGGGCGTATCACGTTCCTGAGCCTTGCCGGGGTAGCGCTa                               >  2:2283285/1‑150 (MQ=255)

                                                                                                                           gcgcCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGCGTATCACGTTCCTGAGCATTGCCGGGGTAGCGCTAGcc                            <  1:5095839/150‑1 (MQ=255)

                                                                                                                              ccgccgGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGCGTATCACGTTCCTGAGCATTGCCGGGGTAGCGCTAGccacc                         <  2:8679942/150‑1 (MQ=255)

                                                                                                                                         gcagGCCCAGCGCCTTGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGCGTATCACGTTCCTGAGCATTGCCGGGGTAGCGCTAGCCACCATGCTTTGCCt              >  1:5750469/1‑150 (MQ=255)

                                                                                                                                         gcagGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGCGTATCACGTTCCTGAGCATTGCCGGGGTAGCGCTAGCCACCATGCTTTGCCt              <  1:5187949/150‑1 (MQ=255)

                                                                                                                                          cagGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGCGTATCACGTTCCTGAGCATTGCCGGGGTAGCGCTAGCCACCATGCTTTGCCTg             >  1:6618357/1‑150 (MQ=255)

                                                                                                                                           agGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGTGAGGCACTGGGCTGGCGTATCACGTTCCTGAGCATTGCCGGGGTAGCGCTAGCCACCATGCTTTGCCTGa            <  1:1955198/150‑1 (MQ=255)

                                                                                                                                           agGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGCGTATCACGTTCCTGAGCATTGCCGGGGTAGCGCTAGCCACCATGCTTTGCCTGa            <  2:1131695/150‑1 (MQ=255)

                                                                                                                                            ggCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGCGTATCACGTTCCTGAGCATTGCCGGGGTAGCGCTAGCCACCATGCTTTGCCTGAt           <  1:4372098/150‑1 (MQ=255)

                                                                                                                                             gCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTCCCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGCGTATCACGTTCCTGAGGATTGCCGGGGTAGCGCTAGCCACCATGCTTTGCCTGTTc          <  2:6996701/150‑1 (MQ=255)

                                                                                                                                               cAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGCGTATCACGTTCCTGAGCATTGCCGGGGTAGCGCTAGCCACCATGCTTTGCCTGATCaa        >  2:3456983/1‑150 (MQ=255)

                                                                                                                                                aaGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGCGTATCACGTTCCTGAGCATTGCCGGGGTAGCGCTAGCCACCATGCTTTGCCTGATCaaa       >  2:1927165/1‑150 (MQ=255)

                                                                                                                                                aaGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGCGTATCACGTTCCTGAGCATTGCCGGGGTAGCGCTAGCCACCATGCTTTGCCTGATCaaa       >  2:4828319/1‑150 (MQ=255)

                                                                                                                                                  ggCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGCGTATCACGTTCCTGAGCATTGCCGGGGTAGCGCTAGCCACCATGCTTTGCCTGATCAAATc     <  1:4842185/150‑1 (MQ=255)

ATTGTCAGCCACTTGCTGTCCTGGCTTTCGCAAAGCTTCGCCATGCTGCTGGTCAGCCGCATCGGCATTGCCCTGGCGCATGCGGTGTTCTGGTCCATCACCGCCTCGCTGGCGGTGCGTGTGGCGCCGCCGGGCCAGCAGGCCAAGGCGCTGGGCCTGCTGGCCACCGGTACTACCCTGGCCATGGTCCTGGGCATCCCGCTGGGCCGTGTGGTGGGCGAGGCACTGGGCTGGCGTATCACGTTCCTGAGCATTGCCGGGGTAGCGCTAGCCACCATGCTTTGCCTGATCAAATCGCT  >  NC_002947/2780955‑2781253

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`