BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	3,038,537	A→T	6.5%	D29V (GAC→GTC)	PP_2646 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	3,038,537	0	A	T	6.5%	1150.8 / 45.5	359	D29V (GAC→GTC)	PP_2646	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (170/162); new base T (10/13); total (184/175)
Fisher's exact test for biased strand distribution p-value = 5.23e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.54e-01

Only 100 of 381 total aligned reads displayed.

CTGCGTGGTCGCCCAGGCCATGAAGACCCTCTATATCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCAGCTGCACGGCAAGCAGGCCGAACGCT  >  NC_002947/3038388‑3038686

      ggTCGCCCAGGCCATGAAGACCCTCTATATCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTcca                                                                                                                                                  >  1:8077236/1‑150 (MQ=255)

          gCCCAGGCCATGAAGACCCTCTATATCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTccagcgc                                                                                                                                              <  1:4893206/150‑1 (MQ=255)

          gCCCAGGCCATGAAGACCCTCTATATCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTccagcgc                                                                                                                                              >  1:2579788/1‑150 (MQ=255)

            ccAGGCCATGAAGACCCTCTATCTCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTccagcgcc‑a                                                                                                                                           <  2:5764672/150‑1 (MQ=255)

              aGGCCATGAAGACCCTCTATATCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCACGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTccagcgcc‑agc                                                                                                                                         >  2:4328390/1‑150 (MQ=255)

              aGGCCATGAAGACCCTCTATATCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCG‑CTGGCGCTGGACGTCGTccagggcctggc                                                                                                                                         <  2:505293/150‑5 (MQ=39)

                 ccATGAAGACCCTCTATATCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑CGCGGc                                                                                                                                      >  1:6342151/1‑150 (MQ=255)

                           ccTCTATATCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCCGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCCATCCGGgt                                                                                                                            >  1:3029624/1‑150 (MQ=255)

                           ccTCTATATCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGgt                                                                                                                            <  2:3465896/150‑1 (MQ=255)

                           ccTCTATATCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGgt                                                                                                                            >  2:1873809/1‑150 (MQ=255)

                           ccTCTATATCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGgt                                                                                                                            >  2:1456351/1‑150 (MQ=255)

                           ccTCTAGATCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGgt                                                                                                                            <  1:4750829/150‑1 (MQ=255)

                             tctATATCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGgtgt                                                                                                                          <  2:4141535/150‑1 (MQ=255)

                             tctATATCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGgtgt                                                                                                                          <  1:2339325/150‑1 (MQ=255)

                               tataTCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTg                                                                                                                        >  2:7485798/1‑150 (MQ=255)

                                   tCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATcc                                                                                                                    >  2:4529644/1‑150 (MQ=255)

                                   tCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATcc                                                                                                                    >  2:5361042/1‑150 (MQ=255)

                                      gccgTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACg                                                                                                                 >  2:4564388/1‑150 (MQ=255)

                                      gccgTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACg                                                                                                                 >  1:4939316/1‑150 (MQ=255)

                                      gccgTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACg                                                                                                                 >  2:8080970/1‑150 (MQ=255)

                                       ccgTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACgg                                                                                                                >  2:363277/1‑150 (MQ=255)

                                       ccgTTTCGGCCAGGGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGGTGCGGGTGTTGATCCACgg                                                                                                                >  2:2976204/1‑150 (MQ=255)

                                          tttCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTgg                                                                                                             >  2:7336868/1‑150 (MQ=255)

                                                  aGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGt                                                                                                     >  1:5411193/1‑150 (MQ=255)

                                                    tGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGttt                                                                                                   >  2:6555994/1‑150 (MQ=255)

                                                       ttCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCTGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCtt                                                                                                <  2:6486643/150‑1 (MQ=255)

                                                       ttCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCtt                                                                                                <  2:7843536/150‑1 (MQ=255)

                                                       ttCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCtt                                                                                                <  1:1367749/150‑1 (MQ=255)

                                                       ttCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCtt                                                                                                <  1:5787279/150‑1 (MQ=255)

                                                       gtCTGAGCGCGGCAAGGAGAGCAGACCATGCGAGTACTGAGATGTGCAGGGCGCAACGACGCCGACCCCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCtt                                                                                                <  2:5669702/149‑1 (MQ=255)

                                                        tCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGTGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTtg                                                                                               <  2:6364875/150‑1 (MQ=255)

                                                          tGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTTATCCACCGTGGCAGCCAGTTTCTtggg                                                                                             >  1:1071196/1‑149 (MQ=255)

                                                          tGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTtggt                                                                                             <  1:5372869/150‑1 (MQ=255)

                                                            aGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGGTTCTtggtgg                                                                                           >  1:517832/1‑150 (MQ=255)

                                                              cGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTgggg                                                                                         >  2:1504028/1‑150 (MQ=255)

                                                               gATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGa                                                                                        <  1:8499371/150‑1 (MQ=255)

                                                                aTGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGaa                                                                                       <  1:3277110/150‑1 (MQ=255)

                                                                  gCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAAt                                                                                     >  2:8220022/1‑150 (MQ=255)

                                                                   cAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATc                                                                                    <  1:3068286/150‑1 (MQ=255)

                                                                   cAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATc                                                                                    <  1:2740662/150‑1 (MQ=255)

                                                                   cAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATc                                                                                    <  1:179022/150‑1 (MQ=255)

                                                                   cAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATc                                                                                    <  2:8633887/150‑1 (MQ=255)

                                                                   cAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATc                                                                                    <  1:8812529/150‑1 (MQ=255)

                                                                      ggAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGaa                                                                                 <  1:13399/150‑1 (MQ=255)

                                                                            cAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTgg                                                                           >  2:5879801/1‑150 (MQ=255)

                                                                            cAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTgg                                                                           >  2:7136598/1‑150 (MQ=255)

                                                                            cAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTgg                                                                           <  2:3208853/150‑1 (MQ=255)

                                                                            cAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTgg                                                                           <  1:7225528/150‑1 (MQ=255)

                                                                             aGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTggg                                                                          >  2:1765823/1‑150 (MQ=255)

                                                                                ccATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCAGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACCGTGGCAGCCAGTTTCTTGGTGGGGAAAACGAAAGCTGGgcgc                                                                       >  1:5546414/1‑150 (MQ=255)

                                                                                  aTGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGgcgcgc                                                                     >  1:5041816/1‑150 (MQ=255)

                                                                                    gCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGa                                                                   <  1:6691991/150‑1 (MQ=255)

                                                                                       aGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCa                                                                <  1:4248702/150‑1 (MQ=255)

                                                                                       aGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCa                                                                >  2:2414338/1‑150 (MQ=255)

                                                                                            tGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCAGGACGACGTCCAGCGCC‑ACCGGCCGATCCGGGTGTTGATACACGGTGGCAGCCAGTTTATTGGTGGGGAAATCGAAAGCTTGGCGCGCGAGCATGgcg                                                           >  1:8339951/1‑150 (MQ=255)

                                                                                            tGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCACGCCCAGGACGACCTCCAGCGCC‑AGCGGCCCCACCGGGTGTTGATCCACCGTGGCAGCCAGTTTCGTGGTGGGGAAATCGACAGCTGGGCGCGCGCGCAGGgcg                                                           >  1:6618031/1‑150 (MQ=255)

                                                                                             gATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGgcgc                                                          <  2:5781915/150‑1 (MQ=255)

                                                                                             gATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCCCCACGCCCGGGACGACGTCCAGCGCC‑CGCCGCCGATCCGGGGGTTGATCCACGGGGGCAGCCCCTTTGTTGGTGGGGAACTCGAAAGCTGGGCGCGCGAGCAGGgcgc                                                          >  1:4080852/1‑150 (MQ=255)

                                                                                              atatGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGcc                                                         >  2:3410847/1‑150 (MQ=255)

                                                                                                 tgtgCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGAt                                                      <  2:7974213/150‑1 (MQ=255)

                                                                                                     cAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGGCCACCGCC‑CGCGGCCCATCCCGGTGTTGATCCACGGTGGCCGCCACTTTCTTTGTGGGGAAAACGAAAGCTGGGCGCGCGAGCCTGGCGCCGATCAgg                                                  >  1:4463624/1‑150 (MQ=255)

                                                                                                       gggCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGCCGACGTCCAGCGCC‑CGCGGCCGATCCGGGTGTTGTTACACGGTGGCAGCCAGTTTATTGGTGGGGGAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTg                                                >  1:6275498/1‑150 (MQ=255)

                                                                                                        ggCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGc                                               <  1:206794/150‑1 (MQ=255)

                                                                                                        ggCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGc                                               <  2:6182443/150‑1 (MQ=255)

                                                                                                          cgcAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGt                                             <  2:6816654/150‑1 (MQ=255)

                                                                                                             aaCTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTAc                                          >  2:3371528/1‑150 (MQ=255)

                                                                                                             aaCTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATACACGGTGGCAGCCACTTTCTTGGTGGGGAAATAGAAATCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTAc                                          >  1:982554/1‑150 (MQ=255)

                                                                                                               cTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTAccc                                        <  1:7883362/150‑1 (MQ=255)

                                                                                                                tACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCg                                       >  1:8608572/1‑150 (MQ=255)

                                                                                                                   gCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCa                                    <  1:7551807/150‑1 (MQ=255)

                                                                                                                       acacCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACt                                <  2:4494072/150‑1 (MQ=255)

                                                                                                                        cacCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTg                               <  2:5559020/150‑1 (MQ=255)

                                                                                                                        cacCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTg                               <  2:4851005/150‑1 (MQ=255)

                                                                                                                         acCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTgg                              >  1:8046940/1‑150 (MQ=255)

                                                                                                                         acCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTgg                              >  2:114496/1‑150 (MQ=255)

                                                                                                                          cccGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGc                             <  1:2227560/150‑1 (MQ=255)

                                                                                                                           ccGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCa                            >  2:2131224/1‑150 (MQ=255)

                                                                                                                           ccGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCa                            <  1:8273264/150‑1 (MQ=255)

                                                                                                                           ccGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCa                            <  2:8509679/150‑1 (MQ=255)

                                                                                                                           ccGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCa                            <  2:3061821/150‑1 (MQ=255)

                                                                                                                           ccGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCa                            <  1:6774042/150‑1 (MQ=255)

                                                                                                                           ccGGCGCTGCCGCCAGGCCCTGGAAGACGTCCAGCGCC‑AGCGGCCGATACGGGTGTTGATACACGGTGGCAGCCAGTTTCTTGGTGGGGAAATAGAAAGCTGGGCGCGCGAGCATTGCGCCGATCTGGTGCGTTAAACGCCAGACTGGCa                            >  1:4401345/1‑150 (MQ=255)

                                                                                                                              gcgcTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAACTCGAAAGCTGGGCGCGCGGGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCAGCt                         <  2:2768012/150‑1 (MQ=255)

                                                                                                                                    gccgctggCGCTGGACGTCGTCCAGGGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCAGCTGCACgg                   >  1:3591103/7‑150 (MQ=255)

                                                                                                                                    ccgccAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGACATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCAGCTGCACgg                   >  2:628041/1‑150 (MQ=255)

                                                                                                                                     cgccAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCAGCTGCACGGc                  >  1:3754883/1‑150 (MQ=255)

                                                                                                                                       gctggCGCTGGACGTCGTCCAGGGCCTGGCGGCAGCGCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCAGCTGCACGGCa                 >  1:6419770/4‑150 (MQ=37)

                                                                                                                                       ccAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCAGCTGCACGGCaa                <  1:5996402/150‑1 (MQ=255)

                                                                                                                                        cAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCAGCTGCACGGCAAg               <  1:5594776/150‑1 (MQ=255)

                                                                                                                                           gCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCAGCTGCACGGCAAGCAg            <  2:5411929/150‑1 (MQ=255)

                                                                                                                                            cccTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCAGCTGCACGGCAAGCAgg           <  2:2576775/150‑1 (MQ=255)

                                                                                                                                             gcTGGACGTCGTCCAGGGCCTGGCGGCAGCGCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCAGCTGCACGGCAAGCAgg           <  2:8564981/149‑1 (MQ=38)

                                                                                                                                             ccTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCAGCTGCACGGCAAGCAGGc          >  2:1297095/1‑150 (MQ=255)

                                                                                                                                                 gacgacGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCAGCTGCACGGCAAGCAGGCCGaa      >  1:1669450/1‑150 (MQ=255)

                                                                                                                                                  acgacgTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCAGCTGCACGGCAAGCAGGCCGAAc     <  1:6330578/150‑1 (MQ=255)

                                                                                                                                                  acgacgTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCAGCTGCACGGCAAGCAGGCCGAAc     <  2:3924934/150‑1 (MQ=255)

                                                                                                                                                  acgacgTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCAGCTGCACGGCAAGCAGGCCGAAc     <  1:7043510/150‑1 (MQ=255)

                                                                                                                                                    gacgTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCAGCTGCACGGCAAGCAGGCCGAACGc   >  2:4735200/1‑150 (MQ=255)

                                                                                                                                                    gacgTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCAGCTGCACGGCAAGCAGGCCGAACGc   >  1:2923404/1‑150 (MQ=255)

                                                                                                                                                    gacgTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATACACGGTGGCAGCCATTTTCTTGGTGGGGAAATCGAAAGCTGGGAGCGAGAGCATGGCGCCGATCTGGTTAGTTACCCGCCAAAATGGCAGCTGCACGGCAAGCAGGCCGAACga   >  2:4805279/1‑149 (MQ=255)

CTGCGTGGTCGCCCAGGCCATGAAGACCCTCTATATCCGCCGTTTCGGCCAGTGGTTCTGAGCGATGCAAGGAGAGCAGACCATGCGAGTACTGATATGTGCAGGGCGCAACTACGCCGACACCCGGCGCTGCCGCCAGGCCCTGGACGACGTCCAGCGCC‑AGCGGCCGATCCGGGTGTTGATCCACGGTGGCAGCCAGTTTCTTGGTGGGGAAATCGAAAGCTGGGCGCGCGAGCATGGCGCCGATCTGGTGCGTTACCCGCCAAACTGGCAGCTGCACGGCAAGCAGGCCGAACGCT  >  NC_002947/3038388‑3038686

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`