| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,058,210 | G→A | 9.0% | intergenic (+19/+27) | PP_2664 → / ← agmR | two‑component system sensor histidine kinase/response regulator/glycerol metabolism activator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,058,210 | 0 | G | A | 9.0% | 595.4 / 39.2 | 234 | intergenic (+19/+27) | PP_2664/agmR | two‑component system sensor histidine kinase/response regulator/glycerol metabolism activator |
| Reads supporting (aligned to +/- strand): ref base G (84/113); new base A (14/6); total (98/136) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.16e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.69e-02 | |||||||||||
Only 100 of 240 total aligned reads displayed.
TCACGGTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCGGCGAT > NC_002947/3058061‑3058359 | tCACGGTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGTTGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCggg < 1:660182/150‑1 (MQ=255)tCACGGTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGAGGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCggg > 2:7638556/1‑150 (MQ=255) cACGGTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGt < 1:3993124/150‑1 (MQ=255) aCGGTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACCAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGtt < 2:2032367/150‑1 (MQ=255) tCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGGCGCGTCGCGGGGTgtta > 1:34308/1‑147 (MQ=255) tCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATc > 2:1420082/1‑150 (MQ=255) aaCTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCcg < 1:4911742/150‑1 (MQ=255) aCTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCcgc < 1:5207451/150‑1 (MQ=255) aCTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCcgc < 2:6045738/150‑1 (MQ=255) ccAGCAACGATCTCAAGCAGCCGCTCCGCGAACTGGGTCACACGCTGATGCACACGCCCGTAAGACCGATGAAACTCAAGCCGGCGATGAGCCATCTGCTGGCCAGGGGCTTGGCAGAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGaa < 2:2729745/149‑1 (MQ=255) aCAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGaa < 1:5354490/150‑1 (MQ=255) aGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGATCAACCCGCGAAGc < 1:1618197/150‑1 (MQ=255) gCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCg < 2:4926439/150‑1 (MQ=255) gCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCg > 2:1385399/1‑150 (MQ=255) gCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGTTGATCCGCGCAGCg > 2:4497183/1‑150 (MQ=255) cAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGGAGCgg > 1:1817304/1‑150 (MQ=255) cAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGATCAACCCGCGAAGCgg < 1:8761266/150‑1 (MQ=255) aaCGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGATCAACCCGCGAAGCGGc < 1:3677611/150‑1 (MQ=255) gATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGGCCCGTGCCGGGTTGTTGCGCCAAGCGGCCgg > 1:2323233/1‑150 (MQ=255) gATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGGTGGTACGCGCAgcgggcgg > 1:3814376/1‑150 (MQ=255) tctcACGCTGCTGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATTAAACTCAAGACGGCGATGAGCCATCTGCTGGCCTGTGGCTTGGCATCGGGGTTGGCCGCTTCGCGGGTTGATCCGCGACGCGGCCGGaa < 2:5032189/150‑1 (MQ=255) tctcAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGTTCCGCGAAGCGGCCGGaa > 1:7246937/1‑150 (MQ=255) tctcAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATACGCGAAGCGGCCGGaa > 2:5529245/1‑150 (MQ=255) tctcAAGCAGATGATCCGCTAAGGGGGTCACACGCTGATGCACAAGCCCTTAAGACCGATGAAACTCAAGCGGGGTTTGAGCAATCTGCTGGCCTGTGGCTTGGCATTGCGGTTGGCCGCTTCGGGGGTTGATCCGCGAAGCGGCCGGaa < 2:8452175/150‑1 (MQ=255) tcgaacaagcagATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTGGGCATAGCGGTTGGCCGCTGCGCGGGGTGTTCCGCGAAGCGGCCGGAAc > 2:4034144/8‑150 (MQ=255) tcAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGGTGTTACGCGCAgccgcccggacc > 1:6309309/1‑144 (MQ=255) cAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAg > 2:8148223/1‑150 (MQ=255) cAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGTTGATACGCGCAGCGGCCGGGACac > 2:1622423/1‑149 (MQ=255) aacaagcagATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGGCGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACCGc > 2:7285976/5‑150 (MQ=255) ccGCGAACGGGGTCACCCGCTGATGCACACGCCGGTACGACCGTTGAAACTCAGGAGGGGGTTGCGCCAGGGGGTGGCCAGTGGCTTGGCTTAGGGGTTGGCCGCTTGGGGGGTTGATCCGCGACGCGGCCGGAACAGCTCAACGGCGCa < 2:362033/150‑1 (MQ=255) gcgAACTGGGTCACACGCTGATGCACACGCCCTTAAGACCTATGAAACTCACGACGGCTATGAGCCATCTGCGGGCCCGTGGCTTGGCATAGGGTTTGGCCGCTTCGGGGGTTGATCCGCGACGGGGCCGGAACAGCTCAACGGCGCAGa < 2:7605784/150‑1 (MQ=255) gcgAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTGGCGGGTTGATCCGCGAAGCGGCCGGAACAGCACAACGGCGCAGa > 2:419355/1‑150 (MQ=255) agtGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATTAAACTCAAGCCGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGATTAGGGGTTGGCCGCTTGGGGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAAt < 2:3944369/148‑1 (MQ=255) ggccaaacGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGTTGAGCAATCTGCTGGCCTGTGGCTGGGCATCGGGGTTGGCCGCTTCGGGGTTTGATCGGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGc < 1:2106900/144‑1 (MQ=255) ggTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGAGGAGCCATCTGCGGGCCCGTGGCTTGGCTTCGGGGTTGGCCGCTTCGGGGGTTGATCCGCGACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGc < 1:2107119/150‑1 (MQ=255) tCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGTTGGTCCGCGAAGCGGCCGGAACACCACAAAGGCGCAGATAATCAGCaa > 2:6614694/1‑150 (MQ=255) acacGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGGTGTTCCGCGAAGCGGCCGGAACAGCGCAACCGCGCAGATAAACAGCaaaa > 1:4318013/1‑150 (MQ=255) gCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGTTGATCCGCGAAGCGGCCGGGACAGCTCAACGGCGCAGATAAACAGCAAAATCGa > 2:5451388/1‑150 (MQ=255) gCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGGTGTTCCGCGAAGCGGCCGGTCCAGCCCAACCGCGCCGATAAACACCaaaaaaga > 1:8553791/1‑146 (MQ=255) gCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTAGCGGGTTTTTGCGCGAAGCGGCCGGGACACCGCAACGGCGCAGATAAAAAGCaaaaaagg > 1:1329943/1‑146 (MQ=255) cTGAGGCACAAGCCCGTAAGACCTATTAAACTCACGACGGCTATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGGGGTTGGCCGCTTCGCGGTTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGat < 2:8226030/150‑1 (MQ=255) tGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTTATCCGCGAAGCGGCCGGAACACCTCAACGGCGCAGATAATAAGCAAAAACGata > 1:7262231/1‑150 (MQ=255) tGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCCGCAAAATCGata > 2:4374049/1‑150 (MQ=255) gATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGATCAACCCGCGAAGc < 2:4360716/106‑1 (MQ=39) aTGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGGTCCGCGAAGCGGCCGGACCAGCTCAACGGCGCAGATAATCAGCAAAAAAGATATc > 2:4793855/1‑150 (MQ=255) gCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCCCGTCGCGGGTTGATCCGCGAAACCGCCGGAACAGCACAAACGCGCAGATAAAAACCAAAAAAGATATCGc > 2:2176358/1‑150 (MQ=255) acaAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCCCGTCCCGGGGTGCTCCCCGCCCCCGCCCGGACACCACAACCGCCCCCAGAAACAGCCAAAACGAAATCGccc > 2:304210/1‑149 (MQ=255) gTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTGGCGGGGTTTTACGCGCAGCGGCCGGAAAACCAAAAAAGCGCCGATAAAAAAAAAAATAAATATAGCCACCACagag > 1:6165339/1‑150 (MQ=255) tAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCCCGTCGCGGGGTTTTACCCGCAGCGGCCCGAACAGCGCAACCGCGCACATAATAAGCAAAAAAGATATCGCCACCACGGAgg > 2:3898713/1‑150 (MQ=255) gACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGGTTATAACCCAAGCGGCCGGTACAAGTAAACGGCGCACATAATCAGCAAAAACGTTAACGCCACCAaggagggtt > 1:8732863/1‑147 (MQ=255) cgttGAAACTCACGACGGCGTTGAGCCATCTGCTGGCCAGGGGCTGGGCATCGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCt < 2:251703/147‑1 (MQ=255) gttGAAACTCCAGCGGGCTTTGAGCCATCTGTGGGCCCGGGGCTTGGCATCGCGGTTGGCCGCTTCGGGGGTTGAGCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCtt < 1:6931175/148‑1 (MQ=255) gATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCtt > 2:671023/1‑150 (MQ=255) aTGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGa > 2:746029/1‑81 (MQ=255) tGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGt < 2:6539450/150‑1 (MQ=255) tCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTTGTCCGGGAAGCGGCCCGGACAGCTCAACCGCGCAGATAAACAGCAAAATAGATATAGCCAGCACAGTGGATGGCGTGTAGCCgg > 2:5306284/1‑150 (MQ=255) tCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAAACAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCgg > 2:700956/1‑150 (MQ=255) tCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGTTTTTCACCGAAGCCGCCGGTACACCGCAAAGGCGCAGATAAACAGCAAAAACGATATAGCCCGCACGGAGGGTGGCTTGTACCCgg > 1:2791383/1‑150 (MQ=255) aaGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGTTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGtt < 1:8806018/150‑1 (MQ=255) aGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTTATACGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATAAGCAAAATCGATATCGCCAGCACAGAGGATGGCTTGTAACCGGTtg > 2:1365732/1‑150 (MQ=255) ccGGCGATGAGCCATCTGCTGGCCCGTGGCTTGGAATTGGGTTTGGACGCTTCGCGGGTTGATCCTCTAAGCGGCCGGAACAGCTCAACGGCGCATATAATCAGCAAAATCTATATCGCCAGCACTGAGGATGGCTTGTACCCGGTtgtg < 2:2748860/149‑1 (MQ=255) cGGCGATGAGCAATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGACCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGc < 2:5412681/150‑1 (MQ=255) ggCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGGTCCGCGAAGCGGCCGGAACAGCTCAACGGCGCCGCTAATCAGCAAAATCGCTATCGCCAGCACGGCGGATGGCTTGTGCCCGGGTGTGcc > 2:8180223/1‑149 (MQ=255) ggCGATGAGCCAGCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGca < 2:7084686/150‑1 (MQ=255) gAGCCATCTGCTGGCCCGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTTATCCGCTACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGa < 2:34308/150‑1 (MQ=255) cgCCATCTGCTGGCCTGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAg < 2:3137038/149‑1 (MQ=255) tCTGCTGGCCTGTGGCTTGGCTTTGCGGTTGGCGGCTTCGGGGGTTGATCCGCGACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTgc < 1:3273138/150‑1 (MQ=255) tCTGCGGGCCTGTGGCTTGGCATAGCGGTGGGCCGCTTCGCGGGTTGATCCGCTAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTgc < 2:200170/150‑1 (MQ=255) gggCCTGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGTTTGATCCGCGACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCaaa < 2:3751675/149‑1 (MQ=255) cctggggcttggcttTGGGGTTGGCCGCTTCGCGGTTTGATCCGCGAAGGGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATc < 1:4360734/145‑1 (MQ=255) cctggggCTGGGCTTGGGGGTGGGCGGCTTCGGGGGTGGAGCCGCGACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATc < 1:299316/145‑1 (MQ=255) ccAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATc < 2:6309309/150‑1 (MQ=255) gTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGcc < 2:5110820/150‑1 (MQ=255) gTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGcc < 2:5775105/150‑1 (MQ=255) ttGGCATAGCGGTTGGCCGCCTCGCGGGGTGGTCCCCGCAGCGGCCCGAACAGCGCAACCGCGCACATAAACAGCAAAATCGAAATCGCCACCCCAGGCGAGGGCGTGTACCCCCGTGTGCACCCTGAGTTTGCGCAAAATAGCCGCAAc > 2:499976/1‑150 (MQ=255) gcttcggggTTGGCCGCTTCGCGGGTTGATCCGCGATGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTg < 1:4183978/143‑1 (MQ=255) gCATAGCGGTTGGCCGCTTCGGGGGTTGATCCGCGACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTg < 1:7743743/150‑1 (MQ=255) cttcggggTGGGCGGCTTCGGGGTTTGAGCCGCCACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTgg < 1:5547638/144‑1 (MQ=255) cattggggTTGGCCGTTTCGGGGGTTGATCCGCTACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTgg < 1:6886534/144‑1 (MQ=255) aGCGGTTGGCCGCTTCGCGGGTTGATCCGCTAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGcc < 1:6556492/150‑1 (MQ=255) aGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAGGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCCCTGAGGATGGCTTGTACCCGGGTGTGCACCTTGAGGTTGCGCAAAATCGCCGAAACGTGGGcc > 1:5644493/1‑150 (MQ=255) tGGCCGCTTCGCGGGTTGATCCGCGACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACg < 2:927364/150‑1 (MQ=255) cggCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACg > 2:4287016/2‑150 (MQ=255) cggCTTCGGGGGTTGTTCCGCCACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtg < 1:2477830/148‑1 (MQ=255) ccGCTTCGGGGGTTGACCGGCGACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtg < 1:7441140/150‑1 (MQ=255) ccGCTTCGCGGGTTGATCGGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtg < 1:7051598/150‑1 (MQ=255) ccGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtg < 1:5040655/150‑1 (MQ=255) ccGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtg > 1:7492149/1‑150 (MQ=255) ccGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtg < 2:2411040/150‑1 (MQ=255) cGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtgg > 1:6351660/1‑150 (MQ=255) cGCTTCGCGGATCAACCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtgg > 1:8436374/1‑150 (MQ=255) gCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACGGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtggt > 1:3161997/1‑150 (MQ=255) cTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATACGCAGCAAAATCGATATCGCCAGCCCGGAGGATGGCTTGTCCCCGGGTGTGCACAGGGAGTTTGCGCAAACGCGCCGAAACGTGGGCCGTGACGGTGGtt > 2:4959307/1‑150 (MQ=255) cTTCGCGGATCAACCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGtt > 2:6302211/1‑150 (MQ=255) ttCGCGGATCAACCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGAGATCGCCAGCACTGAGGATGGCTTGTACCCGGGTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGttt > 2:6747267/1‑150 (MQ=255) ttCGCGGATCAACCCGCGAAGCGGCCAGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGttt > 2:7430004/1‑150 (MQ=255) cgGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCGGc < 1:6479333/150‑1 (MQ=255) gggTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCGGCg > 2:6203224/1‑150 (MQ=255) gggTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCGGCg > 2:6915122/1‑150 (MQ=255) ggTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCGGCGa < 2:1679057/150‑1 (MQ=255) | TCACGGTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCGGCGAT > NC_002947/3058061‑3058359 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |