| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,058,214 | A→T | 8.0% | intergenic (+23/+23) | PP_2664 → / ← agmR | two‑component system sensor histidine kinase/response regulator/glycerol metabolism activator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,058,214 | 0 | A | T | 8.0% | 617.5 / 6.2 | 233 | intergenic (+23/+23) | PP_2664/agmR | two‑component system sensor histidine kinase/response regulator/glycerol metabolism activator |
| Reads supporting (aligned to +/- strand): ref base A (73/132); new base T (14/3); total (98/135) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.48e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 234 total aligned reads displayed.
GGTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCGGCGATGTC > NC_002947/3058065‑3058362 | tCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATc < 1:5613789/150‑1 (MQ=255) aaCTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCcg < 1:4911742/150‑1 (MQ=255) aCTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCcgc < 2:3058515/150‑1 (MQ=255) aCTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCcgc < 2:6045738/150‑1 (MQ=255) aCAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGaa < 2:6664696/150‑1 (MQ=255) aCAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGaa < 1:5354490/150‑1 (MQ=255) aGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGATCAACCCGCGAAGc < 1:1618197/150‑1 (MQ=255) aGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCAGTTGGCCGCTTCGCGGATCAACCCGCGAAGc < 2:3744051/150‑1 (MQ=255) gCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCTGCGAAGCg < 2:4362129/150‑1 (MQ=255) gCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCg < 2:3963287/150‑1 (MQ=255) gCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCg < 2:4926451/150‑1 (MQ=255) cAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGGAGCgg > 1:1817304/1‑150 (MQ=255) cAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCgg < 2:73188/150‑1 (MQ=255) aaCGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGc < 2:2556184/150‑1 (MQ=255) actaTCACACGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGcc < 1:6679909/147‑1 (MQ=255) aCGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCTTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCTGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGcc < 1:2260138/150‑1 (MQ=255) aCGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGcc < 1:8766922/150‑1 (MQ=255) aCGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGcc < 1:5118158/150‑1 (MQ=255) gATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGGTGGTACGCGCAgcgggcgg > 1:3814376/1‑150 (MQ=255) tctcAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATTAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGaa < 2:5031765/150‑1 (MQ=255) tctcAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGTTCCGCGAAGCGGCCGGaa > 1:7246937/1‑150 (MQ=255) tctcAAGCAGATGATCCGCTAAGGGGGTCACACGCTGATGCACAAGCCCTTAAGACCGATGAAACTCAAGCGGGGTTTGAGCAATCTGCTGGCCTGTGGCTTGGCATTGCGGTTGGCCGCTTCGGGGGTTGATCCGCGAAGCGGCCGGaa < 2:8452175/150‑1 (MQ=255) tcAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGGTGTTACGCGCAgccgcccggacc > 1:6309309/1‑144 (MQ=255) cAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAg > 2:8148223/1‑150 (MQ=255) aacaagcagATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGGTCCGCGAAGCGGCCGGCACAGc > 2:7285745/5‑150 (MQ=255) agATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACgg < 2:5038547/150‑1 (MQ=255) tCCGCTAACTGGTTAACACGATGATGAACAACCCCTTAATACCGATCAAAAAAAACACGGCTATGAGCAATCTGCTGGCAAGTGGCTTGGAATAGCGTTTGGCCGATTCGCGGTTTCATCCGCCAAGCGGCCGGAACAGCTCAACGgcgc < 1:6482870/150‑1 (MQ=255) gcgAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCTGTGGCTTGGCATAGCGGTGGGCCGCTTCGCGGGTTGATCCGCGACGCGGCCGGAACAGCTCAACGGCGCAGa < 1:7285393/150‑1 (MQ=255) aaCTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCTTAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATaa < 2:4432648/150‑1 (MQ=255) gggTCACACGCTGATGCACAAGCCCTTAATACCGATTAAACTCAAGACGGCGTTGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCTAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAg < 2:201357/150‑1 (MQ=255) ggccaaacGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGTTGAGCAATCTGCTGGCCTGTGGCTGGGCATCGGGGTTGGCCGCTTCGGGGTTTGATCGGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGc < 1:2106900/144‑1 (MQ=255) ggTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTAGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTAAACGGCGCAGATAAACAGc > 2:152861/1‑150 (MQ=255) ggTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGAGGAGCCATCTGCGGGCCCGTGGCTTGGCTTCGGGGTTGGCCGCTTCGGGGGTTGATCCGCGACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGc < 1:2107119/150‑1 (MQ=255) tCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGTTGGTCCGCGAAGCGGCCGGAACACCACAAAGGCGCAGATAATCAGCaa > 2:6614694/1‑150 (MQ=255) gcttaggCACACGCCCGTAAGACCGATGAAACTCAAGAGGGCGTTGTGCCATGTGGTGGCCTGTGGCTTGGCATCGGGGTTGGCCGCTTCGGGGGTTGATCCGCGACGGGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGa < 2:3856868/144‑1 (MQ=255) gCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGTTGATCCGCGAAGCGGCCGGGACAGCTCAACGGCGCAGATAAACAGCAAAATCGa > 2:5451388/1‑150 (MQ=255) gCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTAGCGGGTTTTTGCGCGAAGCGGCCGGGACACCGCAACGGCGCAGATAAAAAGCaaaaaagg > 1:1329943/1‑146 (MQ=255) cTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCTATGAGCCATCTGCTGGCCTGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGat < 2:1386363/150‑1 (MQ=255) cTGAGGCACAAGCCCGTAAGACCTATTAAACTCACGACGGCTATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGGGGTTGGCCGCTTCGCGGTTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGat < 2:8226030/150‑1 (MQ=255) tGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCCGGGTTATGCGCGGAGCGGCCCGGCCAGCGCAACCGCGCCCATAATAAACAAAATCGata > 1:3765642/1‑150 (MQ=255) gATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGATCAACCCGCGAAGc > 1:4360716/1‑106 (MQ=39) tGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGGTGATCAGCGAAGCGGCCGGAACAGCTCAACGGCGCAGAAAATCAGCAAAATCGATATCg > 2:1657085/1‑150 (MQ=255) gCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTAGCGGGTTTATAAGCGAATCGGCCGGAACAGCACAAAGGCGCAGATAAAAATCAAAAAAGATATctc > 1:8534490/1‑148 (MQ=255) acaAGCCCTTAAGACCTATTAAACTCAAGCCGGCGTTGAGCAATCTGGTGGCCTGGGGCTTGGCTTCGCGTTGGGCCGCGTCGCGGGTTGAGCCGCCACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCa < 1:3377604/150‑1 (MQ=255) gTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGGCGCGTCGCGGGTTGTTACGCGAAGCGGCCGGGAAACCACAAACGCGCCGATAATAAGCAAAAAAGATATAGCCAGCACagag > 1:6276280/1‑150 (MQ=255) tAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAACGAAAACGCGCAGAAAAAAAGCAAAATAGAAATAGCCAGCACAGAgg > 2:3898786/1‑150 (MQ=255) aCCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGAATAGCGTTTGGCCGCTTCGCGGGTTGATCCGCCAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATgg < 1:4245692/150‑1 (MQ=255) ccGATGAAACTCAAGACGGCGTTGAGCCATCTGCTGGCCTGTGGATTGGCATAGCGGTTGGCCGCTTCGCGGTTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGc < 2:3605774/150‑1 (MQ=255) cgttGAAACTCACGACGGCGTTGAGCCATCTGCTGGCCAGGGGCTGGGCATCGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCt < 2:251703/147‑1 (MQ=255) gATGAAACCCACGACGGCGATGAGCCATCGGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCtt < 1:8003995/150‑1 (MQ=255) aTGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGa > 2:746029/1‑81 (MQ=255) aTGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGTTGATCCGCGAAGCGGCCGGACCAGCTCAAAGGCGCAGATAATAAGCCAAATAGATATCGCCAGCCCGGAGGGTGGCttt > 1:8725516/1‑149 (MQ=255) tGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGt < 2:6539450/150‑1 (MQ=255) accTCATGACGGCTATGAGCCATCTGGTGGCCTGTGGCTTGGCTTCGGGGTTGGCCGCTTCGGGGGTTGACCCGCGACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTAcc < 1:6915588/148‑1 (MQ=255) tCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGTTTTTCACCGAAGCCGCCGGTACACCGCAAAGGCGCAGATAAACAGCAAAAACGATATAGCCCGCACGGAGGGTGGCTTGTACCCgg > 1:2791383/1‑150 (MQ=255) aGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGCAGCGGCCCGAACAGCTCAACGGCGCAGATAATAAGCAAAATCGATATCGCCAGCACTGAGGGTGGCTTGTACCCGGTtg > 2:1365861/1‑150 (MQ=255) ccGGCGATGAGCCATCTGCTGGCCCGTGGCTTGGAATTGGGTTTGGACGCTTCGCGGGTTGATCCTCTAAGCGGCCGGAACAGCTCAACGGCGCATATAATCAGCAAAATCTATATCGCCAGCACTGAGGATGGCTTGTACCCGGTtgtg < 2:2748860/149‑1 (MQ=255) cGGCGATGAGCAATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGACCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGc < 2:5412681/150‑1 (MQ=255) ggCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGGTCCGCGAAGCGGCCGGAACAGCTCAACGGCGCCGCTAATCAGCAAAATCGCTATCGCCAGCACGGCGGATGGCTTGTGCCCGGGTGTGcc > 2:8180223/1‑149 (MQ=255) ggCGATGAGCCAGCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGca < 2:7084686/150‑1 (MQ=255) gAGCCATCTGCTGGCCTGTGGCTTGGCATTGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGa < 2:4211555/150‑1 (MQ=255) gAGCCATCTGCTGGCCCGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTTATCCGCTACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGa < 2:34308/150‑1 (MQ=255) aTCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGGACCGGCCGGAACAGCTCAACGGCGCCGATAAAAAGCAAAATCGATATGGCCAGCACTGAGGGTGGCGTGTTCCCGGGTGTGCACAATGCGTTTg > 2:5312608/1‑150 (MQ=255) tgtgctgGCCAGTGGCTTGGCATTGGGGTTGGCCGCTTCGGGGGTTGATCGGCGACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTgc < 1:8749854/148‑1 (MQ=255) ctgGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGGTGATCCGCGAAGCGGCCCGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCaa > 2:4357871/1‑150 (MQ=255) cctgTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGATGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATc < 2:7609713/147‑1 (MQ=255) ccAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATc < 2:2130445/150‑1 (MQ=255) ccAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATc < 2:130096/150‑1 (MQ=255) ccAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATc < 2:6309309/150‑1 (MQ=255) ccAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATc < 2:4920760/150‑1 (MQ=255) ggggCTTGGAATAGCGGTTGGCCGCTTCGCGGTTTGATCCGCGACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGcc < 2:298896/148‑1 (MQ=255) gTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGcc < 2:5110820/150‑1 (MQ=255) gTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGcc < 2:5775105/150‑1 (MQ=255) gTGGCTGGGCATTGGGGGTGGCGGCTTCGCGGTTTGAGCCGGTACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGcc < 2:1737469/150‑1 (MQ=255) tGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAACGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCCCATTGAGTTTGCGCAAAATCGCCg > 2:4119935/1‑150 (MQ=255) cttcggggTGGGCGGCTTCGGGGTTTGAGCCGCCACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTgg < 1:5547638/144‑1 (MQ=255) aGCGGTTGGCCGCTTCGCGGGTTGATCCGCTAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGcc < 1:6556492/150‑1 (MQ=255) ttGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACCTTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGAc > 2:5596455/1‑150 (MQ=255) tGGCCGCTTCGCGGGTTGATCCGCGACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACg < 2:927364/150‑1 (MQ=255) cggCTTCGGGGGTTGTTCCGCCACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtg < 1:2477830/148‑1 (MQ=255) ccGCTTCGGGGGTTGACCGGCGACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtg < 1:7441140/150‑1 (MQ=255) ccGCTTCGCGGGTTGATCGGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtg < 1:7051598/150‑1 (MQ=255) ccGCTTCGCGGGTTGATCCGCGATGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtg < 1:4384098/150‑1 (MQ=255) ccGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtg < 2:2411040/150‑1 (MQ=255) ccGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtg > 1:7492149/1‑150 (MQ=255) ccGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtg < 1:5040655/150‑1 (MQ=255) cGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtgg > 1:6351660/1‑150 (MQ=255) gCTTCGGGGTTTGATCCGCGACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtggt < 1:3217048/150‑1 (MQ=255) gCTTCGCGGGTTGATCCGCGAAGCGGCCGGACCAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtggt > 2:7514371/1‑150 (MQ=255) gCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACGGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtggt > 1:3161997/1‑150 (MQ=255) gCTTCGCGGATCAACCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTCCCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtggt > 1:2931160/1‑150 (MQ=255) gCTTCGCGGATCAACCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtggt > 1:3994408/1‑150 (MQ=255) cTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATACGCAGCAAAATCGATATCGCCAGCCCGGAGGATGGCTTGTCCCCGGGTGTGCACAGGGAGTTTGCGCAAACGCGCCGAAACGTGGGCCGTGACGGTGGtt > 2:4959307/1‑150 (MQ=255) cTTCGCGGATCAACCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGtt > 2:6302211/1‑150 (MQ=255) ttCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGttt < 2:6990901/150‑1 (MQ=255) ttCGCGGATCAACCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGAGATCGCCAGCACTGAGGATGGCTTGTACCCGGGTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGttt > 2:6747267/1‑150 (MQ=255) ttCGCGGATCAACCCGCGAAGCGGCCAGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGttt > 2:4525105/1‑150 (MQ=255) gggTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCGGCg > 2:6915122/1‑150 (MQ=255) gggTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCGGCg > 2:6203224/1‑150 (MQ=255) gATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCGGCGATGTc > 1:81943/1‑150 (MQ=255) | GGTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCGGCGATGTC > NC_002947/3058065‑3058362 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |