| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,059,724 | C→G | 5.5% | intergenic (‑207/+101) | PP_2666 ← / ← PP_2667 | hypothetical protein/ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,059,724 | 0 | C | G | 5.5% | 590.2 / 14.9 | 182 | intergenic (‑207/+101) | PP_2666/PP_2667 | hypothetical protein/ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base C (45/124); new base G (4/6); total (52/130) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.65e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 187 total aligned reads displayed.
GACGATAGACAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGAGGATC > NC_002947/3059577‑3059873 | gacgaTAGACAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAg > 2:3001400/1‑150 (MQ=255) aTAGACAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGc < 1:6352928/150‑1 (MQ=255) tAGACAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGGCGGGCGGGGCGGAAGGGCCCCGCCCCGGcc > 2:8478944/1‑150 (MQ=37) aGACAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGccc < 1:1998099/150‑1 (MQ=255) aCAGTAAATTCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCa < 2:7358501/150‑1 (MQ=255) aCAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGGGGGGGGTCGCGCGTGGGCCCCGCCGCGGcaccg > 1:5059002/1‑149 (MQ=25) aCAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGGCCTGCGTCGCGGAAGGGCCGCGCCCCGGccccc > 2:6833276/1‑149 (MQ=38) aCAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCTGCGCGGccctt < 1:5602880/150‑3 (MQ=255) aCAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCa < 2:1567599/150‑1 (MQ=255) aGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAGGGGCCGCTGCGCGGccctttc < 1:5512951/150‑5 (MQ=37) aGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCGTTGGGGGGGGAAGGGCCGCGCCGCGGGCCCCg‑g > 2:3542866/1‑150 (MQ=37) gTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑Ga < 1:2143732/150‑1 (MQ=255) tAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GAt < 2:6052167/150‑1 (MQ=255) aaaTGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGGCGGGCGGCCCGCAAGGGCCGCGCCGCGCccccccgcgc > 2:5538468/1‑144 (MQ=37) aaTGCAGTACTAACGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GAtct < 1:5952756/150‑1 (MQ=255) aTGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GAtctc < 2:4684294/150‑1 (MQ=255) tGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCg < 2:7748082/150‑1 (MQ=255) gCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCgg < 1:2531462/150‑1 (MQ=255) cTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGcatcat < 2:5057176/150‑1 (MQ=255) tAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GAtctc > 2:461440/1‑141 (MQ=255) tAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GAtctc < 1:461440/141‑1 (MQ=255) tAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATg < 1:5327598/150‑1 (MQ=255) tAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATg < 2:4367053/150‑1 (MQ=255) aaGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCg > 1:4506986/1‑140 (MQ=255) aaGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCg < 2:4506986/140‑1 (MQ=255) aaGTAGTAGATGGCCGGGCGCCTGAAGGAATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCa < 1:5599477/150‑1 (MQ=255) gtagtaGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATa < 1:7542828/150‑1 (MQ=255) tagtagATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAg < 2:1576214/150‑1 (MQ=255) agATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTg < 2:1304365/150‑1 (MQ=255) gATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGc < 2:8422635/150‑1 (MQ=255) tGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTg < 1:8035391/150‑1 (MQ=255) cGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGc < 1:8139295/150‑1 (MQ=255) gcgcCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGc < 1:7121383/150‑1 (MQ=255) ccTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGCAATCTATGCATGATGCCGAGA‑TCCTGGGGCCGCtgc < 2:2571723/150‑3 (MQ=21) tGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGc < 2:2376098/150‑1 (MQ=255) tGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGc < 2:2376039/150‑1 (MQ=255) aaGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCgg < 1:614168/150‑1 (MQ=255) aaGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCgg < 1:6096815/150‑1 (MQ=255) aTGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCAAAGCGGcccca < 1:2825954/150‑3 (MQ=255) gagaCGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATcg < 2:7968026/150‑1 (MQ=255) cgtcGCCCTAGGGTGCAACTGTATTGGTCAATTTCTGAAATCGGGCGCGATCCCTGTGGGTGCGGCCTTGGGTCGCGAAAGGGCCGGGGATCGGCCCCAG‑GCTCTCGGCCTCATGCATAGTTTGCTGGGGCCGCTTTGCGGCCCAATcgc < 1:4344601/147‑1 (MQ=255) agaCGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATcgc < 2:5123111/150‑1 (MQ=255) agaCGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATcgc < 2:3143282/150‑1 (MQ=255) agaCGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATcgc < 1:5808360/150‑1 (MQ=255) agaCGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATcgc < 2:7821109/150‑1 (MQ=255) agaCGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATcgc < 2:375384/150‑1 (MQ=255) aCGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGa < 1:364076/150‑1 (MQ=255) gggAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGc < 2:8293790/150‑1 (MQ=255) tgatCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑TATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACggg < 1:1309400/147‑1 (MQ=255) tCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAg > 1:8627934/1‑93 (MQ=255) tCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAg < 2:8627934/93‑1 (MQ=255) cTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCa < 2:4102386/150‑1 (MQ=255) cTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCa < 1:4149095/150‑1 (MQ=255) cTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCa < 1:5719888/150‑1 (MQ=255) tGAAAGCTGGCGCGATCCCTGTGGGAGCGGGCATGCGTGGCGAAAGGGGCCCGCAGCGGCCCCAG‑GATGTCCGCCGCAAGCATATATTGGTGGGGCGCCGGTTGGGCCCAATAGCCACACAAGGCCGCACCCACACACGGTACACGCCac > 2:8790657/1‑149 (MQ=255) aaaGCTGGCGCGATCCCTGTGGGTGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGt < 1:6916040/150‑1 (MQ=255) acgCTGGCGCGCTCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCGGGGGCCGCTTTGCGGCCCAATCGCGACACACGGCCGCTCCCACACGGGTTACACGCCAGGtt < 1:6846647/148‑1 (MQ=255) ggtGGCGCGCTCCGTGGGGGAGCGGCCTGGCGTCGCGAGCGGGCCGCGCCGCGGCCCCAG‑GATCCCGGCATCATGCATCGATTGCGGGGGCCGCTTGGCGGCCCAACCGCGACACAAGGCCGCCCCCACACGGGTTACACGCCAGGtttt < 1:3906161/148‑1 (MQ=255) tGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCa < 1:7262676/150‑1 (MQ=255) gcgATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAgcgc < 1:6505201/150‑1 (MQ=255) gCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACACGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCt < 2:8040280/150‑1 (MQ=255) cGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCCTGCGCAGCGCTg > 2:7880448/1‑150 (MQ=255) ccTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCAt > 1:8490438/1‑150 (MQ=255) ccTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCAt > 2:1933291/1‑150 (MQ=255) ccTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCAt > 2:4493617/1‑150 (MQ=255) cTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATg > 1:1981953/1‑150 (MQ=255) cTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATg > 1:6560810/1‑150 (MQ=255) cTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGGTTTCAGCGCGGCTTGCGCAGCGCTGCATg > 2:6808290/1‑150 (MQ=255) cGTCGCGAACGGGCCGCGCAGCGGCCCCAG‑GATCGCGGCAGCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACACGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTgg < 2:1814065/150‑1 (MQ=255) cGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTgg < 2:6351471/150‑1 (MQ=255) gTCGCGTATGGGCCGCGCAGCGCCCCCCG‑GAGCTGGGCATCATGCTTAGATGGCTGGGGCCGCTTTGCGGCCCAATCGCGACCCACGGCCGCTCCCACACGGGTGACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTggg < 1:7708986/150‑1 (MQ=255) tCGCGAACGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTgggg < 2:101345/150‑1 (MQ=255) tCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTgggg > 1:6059509/1‑150 (MQ=255) tCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTgggg < 1:6100774/150‑1 (MQ=255) tCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTgggg > 1:6401203/1‑150 (MQ=255) gcgAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGt < 2:1551005/150‑1 (MQ=255) gcgAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGt > 1:1325388/1‑150 (MQ=255) gcgAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGt > 1:7978191/1‑150 (MQ=255) tggggCCGCTGCGCGGCCCTAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGaa > 1:2837408/3‑150 (MQ=255) aaGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGaa < 2:2838752/150‑1 (MQ=255) ggggCCGCTGCGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAg > 2:2841774/2‑150 (MQ=255) aGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAg < 1:1203184/150‑1 (MQ=255) aGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAg < 1:6884904/150‑1 (MQ=255) gggCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAgg > 2:1192761/1‑150 (MQ=255) gggCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAgg < 1:5673433/150‑1 (MQ=255) ggCCGCAAAGCGGCCCCAGCAATCTATGCATGATGCCGAGA‑TCCTGGGGCCGCTGCGCGGCCCTTTCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGt > 1:5618693/1‑150 (MQ=14) gCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTg > 1:150509/1‑150 (MQ=255) gCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTg > 2:5747108/1‑150 (MQ=255) ccGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCACTCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGa < 2:6545661/150‑1 (MQ=255) ccGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGa < 1:2954361/150‑1 (MQ=255) ccGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGa > 1:1042977/1‑150 (MQ=255) ccGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGa > 1:1042745/1‑150 (MQ=255) ccGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGa < 2:7233292/150‑1 (MQ=255) ccGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGa < 2:6893393/150‑1 (MQ=255) ccGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGa > 1:1042559/1‑150 (MQ=255) ccGCGCAGCGGCCCCAG‑GATCTCGGCATCAGGCATCGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGa < 2:6116839/150‑1 (MQ=255) cgcgCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGAg < 2:5831315/150‑1 (MQ=255) gcgcAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGAgg > 2:6780510/1‑150 (MQ=255) cgcAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGAGGa < 2:7996464/150‑1 (MQ=255) cAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGAGGATc < 2:591407/150‑1 (MQ=255) | GACGATAGACAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAG‑GATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGAGGATC > NC_002947/3059577‑3059873 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |