| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,084,633 | G→C | 6.7% | intergenic (‑376/+58) | PP_2688 ← / ← PP_2689 | hypothetical protein/endoribonuclease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,084,633 | 0 | G | C | 6.7% | 1291.2 / 60.5 | 385 | intergenic (‑376/+58) | PP_2688/PP_2689 | hypothetical protein/endoribonuclease |
| Reads supporting (aligned to +/- strand): ref base G (150/208); new base C (16/10); total (166/219) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.45e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.38e-01 | |||||||||||
Only 100 of 408 total aligned reads displayed.
CCGCAAGGGCCGGCGCATCAAAAAAGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTGGGGTAGGGTGCCT > NC_002947/3084484‑3084782 | cGCAAGGGCCGGCGCATCAAAAAAGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCcgcgc > 1:8258640/1‑150 (MQ=255) aaGGGCCGGCGCATCAAAAAAGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCgcggg < 1:5266290/150‑1 (MQ=255) aGGGCCGGCGCATCAAAAAAGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCgcgggc > 1:5425222/1‑150 (MQ=255) ccGGCGCATCAAAAAAGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCa > 1:1443849/1‑150 (MQ=255) cGGCGCATCAAAAAAGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCAc < 1:7278980/150‑1 (MQ=255) cGGCGCATCAAAAAAGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCAc > 2:594340/1‑150 (MQ=255) gcgcATCAAAAAAGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTc < 2:2098291/150‑1 (MQ=255) cgcATCAAAAAAGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCg > 2:3723352/1‑150 (MQ=255) cATCAAAAAAGGGCGCTTTTGACCCGGGCGCGGGTTTTGCACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGTGCCGCCCGCGCGGCGCTCGAt < 1:4810310/150‑1 (MQ=255) aTCAAAAAAGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGAtt > 2:8086559/1‑150 (MQ=255) aTCAAAAAAGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGAtt > 2:5455632/1‑150 (MQ=255) aaaaaGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGTCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTgcgc > 2:2730458/1‑150 (MQ=255) aaaaaGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCAATCGAGTGCCGCCCGCGCGGCGCTCGAtgcat < 2:8377876/150‑5 (MQ=255) aGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAAc < 1:2203682/150‑1 (MQ=255) ttttGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAat > 1:2337098/1‑150 (MQ=255) ttttGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAat > 1:7559685/1‑150 (MQ=255) tcccGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCTTGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCTCGGGCGGCACTCGATTGCGCGAACGCTGAATTTCGt < 1:2797212/149‑1 (MQ=255) aCCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGt < 1:4675171/150‑1 (MQ=255) cgcgGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACgg < 2:3318692/150‑1 (MQ=255) gggTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGgcg > 1:2418364/1‑150 (MQ=255) gTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGcc > 1:3638894/1‑150 (MQ=255) gAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAg < 2:346579/150‑1 (MQ=255) gAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAg < 1:2045746/150‑1 (MQ=255) aCCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAATGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAggg > 1:330981/1‑150 (MQ=255) aCCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAggg < 2:5654115/150‑1 (MQ=255) ccGACATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCTGAGTGGGCATGC‑ATCGAGCGCCGCGCTGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGc < 1:7198863/150‑1 (MQ=255) ccGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGc > 1:8531553/1‑150 (MQ=255) cGAAATGGGGCGCAGGCCGGTGTCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCg > 1:1547426/1‑150 (MQ=255) cGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCg > 1:1183652/1‑150 (MQ=255) cGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCg > 1:690191/1‑150 (MQ=255) cGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCg > 2:7264065/1‑150 (MQ=255) gAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGt > 1:7666916/1‑150 (MQ=255) aaTGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCa > 2:3374027/1‑150 (MQ=255) tGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCaga < 1:6259981/150‑1 (MQ=255) tGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCaga < 2:1405697/150‑1 (MQ=255) gggCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGagg < 2:1266049/150‑1 (MQ=255) gcgcAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGaggca > 2:495443/1‑150 (MQ=255) gcgcAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGaggca > 2:6168003/1‑150 (MQ=255) cgcAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGTGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCATGGCGTCAGaggcag < 2:3670387/150‑1 (MQ=255) gcAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGaggcagg > 2:1537861/1‑150 (MQ=255) aGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCg < 2:5534308/150‑1 (MQ=255) gCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTa < 1:5872571/150‑1 (MQ=255) gCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTa < 1:6479155/150‑1 (MQ=255) gCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTa < 2:1803961/150‑1 (MQ=255) gCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTa < 1:7110503/150‑1 (MQ=255) gCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTa < 1:7954419/150‑1 (MQ=255) cGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGa < 1:5404084/150‑1 (MQ=255) cGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGa < 2:4619428/150‑1 (MQ=255) gCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGaccac < 2:3611112/150‑1 (MQ=255) gCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCAGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGaccac < 1:5519627/150‑1 (MQ=255) gCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCAAGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGaccac < 2:2012402/150‑1 (MQ=255) cTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGAccacca < 2:7477561/150‑1 (MQ=255) tGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAg > 2:6634036/1‑150 (MQ=255) gCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGtt > 2:7638808/1‑150 (MQ=255) gCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGtt > 2:8512389/1‑150 (MQ=255) gagaAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTccac < 2:3958338/150‑1 (MQ=255) aaaGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCa > 2:4507196/1‑150 (MQ=255) aaaGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCa < 1:3043961/150‑1 (MQ=255) aaGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCAt < 2:3259205/150‑1 (MQ=255) aaGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATAGCGAGACGGGCGCCTTCAGCGCGTCAGAGGCAGGCGTAGACAACCAGTTCAACCAGCAt > 2:7030599/1‑150 (MQ=255) gggAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTg > 2:4894845/1‑83 (MQ=255) ggAGTAGTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATttc < 1:3178335/150‑1 (MQ=255) gTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATttcttc < 1:608474/150‑1 (MQ=255) gTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATttcttc < 2:5373323/150‑1 (MQ=255) tATTCCGGTTGCATGACGTGGTGCGGTGGGGGCATGC‑ATCGAGCGCCGCGCTGGCGGCACTCGATTGCGCGATCGCTGAATATCTTGAGACGGGGTCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTcc < 1:1069925/150‑1 (MQ=255) tATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTcc < 1:6624687/150‑1 (MQ=255) ttCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCg > 2:8328902/1‑150 (MQ=255) ttCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCg > 1:8360570/1‑150 (MQ=255) ttCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCg > 2:6355026/1‑150 (MQ=255) tCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCgg < 1:5472526/150‑1 (MQ=255) ccGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCggg > 1:8003714/1‑150 (MQ=255) cGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGc > 1:4268918/1‑150 (MQ=255) ggTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGa < 1:6717676/150‑1 (MQ=255) cATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGgcc > 1:617846/1‑150 (MQ=255) aTGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGgcca < 1:6781169/150‑1 (MQ=255) aTGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGgcca < 2:8454926/150‑1 (MQ=255) tGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGgccag > 1:8720945/1‑150 (MQ=255) tGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGgccag > 1:2602881/1‑150 (MQ=255) aCGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGgccagcc > 1:4979249/1‑150 (MQ=255) aGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTCCGGc > 2:2316932/1‑150 (MQ=255) gggggCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGATGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGcc < 2:7892710/150‑1 (MQ=255) gggggCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGcc < 1:5974783/150‑1 (MQ=255) ggggCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCcg > 2:509693/1‑150 (MQ=255) ggCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCCGGCGTAGACCTCCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCcgcg < 1:896224/150‑1 (MQ=255) gcatgc‑atCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCcgcgc < 1:4366032/150‑1 (MQ=255) atCGAGTGCCGCCCGCGCGGCGCTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTgg > 1:1866977/1‑150 (MQ=255) atCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTgg > 1:4169884/1‑150 (MQ=255) tCGAGTGCCGCCCGCGCGGCGCTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCTGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTggg > 2:299710/1‑150 (MQ=255) tCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTggg < 1:3217014/150‑1 (MQ=255) tCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTggg < 2:4380417/150‑1 (MQ=255) tCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTggg < 1:5059403/150‑1 (MQ=255) tCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTggg < 2:6723951/150‑1 (MQ=255) tCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTggg < 1:2863649/150‑1 (MQ=255) cGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTgggg < 1:135006/150‑1 (MQ=255) cGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTgggg < 1:4522672/150‑1 (MQ=255) gAGTGCCGCCCGCGCGGCGCTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTGGGGt > 1:3941387/1‑150 (MQ=255) aGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTGGGGTa > 1:5694872/1‑150 (MQ=255) aGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTGGGGTa > 2:1066894/1‑150 (MQ=255) gcgcgGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTGGGGTAGGGTGc > 1:3472703/1‑150 (MQ=255) gcgcgGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTGGGGTAGGGTGc > 2:2525556/1‑150 (MQ=255) | CCGCAAGGGCCGGCGCATCAAAAAAGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTGGGGTAGGGTGCCT > NC_002947/3084484‑3084782 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |