| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,084,636 | G→C | 7.2% | intergenic (‑379/+55) | PP_2688 ← / ← PP_2689 | hypothetical protein/endoribonuclease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,084,636 | 0 | G | C | 7.2% | 1303.2 / 65.6 | 389 | intergenic (‑379/+55) | PP_2688/PP_2689 | hypothetical protein/endoribonuclease |
| Reads supporting (aligned to +/- strand): ref base G (151/210); new base C (18/10); total (169/220) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.84e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 407 total aligned reads displayed.
CAAGGGCCGGCGCATCAAAAAAGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTGGGGTAGGGTGCCTGG > NC_002947/3084487‑3084784 | aaGGGCCGGCGCATCAAAAAAGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCgcggg < 1:4344010/150‑1 (MQ=255) ccGGCGCATCAAAAAAGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCa > 1:1443849/1‑150 (MQ=255) cGGCGCATCAAAAAAGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCAc > 2:594340/1‑150 (MQ=255) cGGCGCATCAAAAAAGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCAc < 1:7279055/150‑1 (MQ=255) ggCGCATCAAAAAAGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACt < 1:4161304/150‑1 (MQ=255) aTCAAAAAAGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGAtt < 1:6076336/150‑1 (MQ=255) aTCAAAAAAGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGAtt > 2:8086559/1‑150 (MQ=255) caacccaGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTgc < 2:1797344/144‑1 (MQ=255) cAAAAAAGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTgc < 2:5424198/150‑1 (MQ=255) aaaaaaGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTgcg > 1:6756574/1‑150 (MQ=255) aaaaaGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCTGAGGGGGCATGCAATCGAGTGCCGCCCGCGCGGCGCTCGAtgcat < 2:3944632/150‑5 (MQ=255) aaaaaGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGCAATCGAGTGCCGCCCGCGCGGCGCTCGAtgcat < 2:8377876/150‑5 (MQ=255) aGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAAc < 1:2203682/150‑1 (MQ=255) gcgcTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCt < 2:5457509/150‑1 (MQ=255) gcTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGa > 1:829558/1‑150 (MQ=255) cTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGaa < 1:474968/150‑1 (MQ=255) ttttGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAat > 1:7962291/1‑150 (MQ=255) ttttGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAat > 2:3482699/1‑150 (MQ=255) ttttGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAat > 1:2337098/1‑150 (MQ=255) ttGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAatat > 2:4151276/1‑150 (MQ=255) tcccGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCTTGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCTCGGGCGGCACTCGATTGCGCGAACGCTGAATTTCGt < 1:2797212/149‑1 (MQ=255) aCCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGt < 1:4522141/150‑1 (MQ=255) ccGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTga < 1:4215530/150‑1 (MQ=255) ccGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTga < 1:2968382/150‑1 (MQ=255) cgcgGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACgg < 2:3318914/150‑1 (MQ=255) cgGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGgc < 1:7115804/150‑1 (MQ=255) gggTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGgcg > 1:2418364/1‑150 (MQ=255) gAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAg < 1:2045746/150‑1 (MQ=255) gAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAg < 1:596959/150‑1 (MQ=255) aaCCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAgg > 2:4726269/1‑150 (MQ=255) aCCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAATGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAggg > 1:330981/1‑150 (MQ=255) aCCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAggg < 1:8560424/150‑1 (MQ=255) aCCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAggg < 2:5654115/150‑1 (MQ=255) ccGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGc < 2:3625857/150‑1 (MQ=255) cGAAATGGGGCGCAGGCCGGTGTCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCg > 1:1547426/1‑150 (MQ=255) cGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCg > 1:690191/1‑150 (MQ=255) cGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCg > 1:1183652/1‑150 (MQ=255) cGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCg > 2:7264065/1‑150 (MQ=255) cGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGAGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCg > 1:5592720/1‑150 (MQ=255) tGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCaga < 1:3918674/150‑1 (MQ=255) tGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCaga < 2:6222798/150‑1 (MQ=255) tGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCaga < 1:7593102/150‑1 (MQ=255) gggCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGagg < 2:4381951/150‑1 (MQ=255) ggCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGaggc > 2:1282016/1‑150 (MQ=255) cgcAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGaggcag < 1:6155392/150‑1 (MQ=255) aGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCg < 2:5534308/150‑1 (MQ=255) gCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTa > 2:3271268/1‑150 (MQ=255) ccGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAg < 2:2044769/150‑1 (MQ=255) gCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGaccac < 1:96647/150‑1 (MQ=255) gCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGaccac > 1:5039149/1‑150 (MQ=255) ccTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGaccacc > 2:2201392/1‑150 (MQ=255) cTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGAccacca < 2:7477561/150‑1 (MQ=255) tGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAg > 2:6634311/1‑150 (MQ=255) tGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAg > 1:6213178/1‑150 (MQ=255) gCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGtt > 2:8512389/1‑150 (MQ=255) gCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGtt > 2:7638808/1‑150 (MQ=255) cGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTc < 2:3095078/150‑1 (MQ=255) aaaaGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGc > 2:6411230/1‑150 (MQ=255) aaaGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCa > 2:4507234/1‑150 (MQ=255) gggAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTg < 1:4894845/83‑1 (MQ=255) aGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATttctt > 1:511550/1‑150 (MQ=255) tATTCCGGTTGCATGACGTGGTGCGGTGGGGGCATGC‑ATCGAGCGCCGCGCTGGCGGCACTCGATTGCGCGATCGCTGAATATCTTGAGACGGGGTCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTcc < 1:1069925/150‑1 (MQ=255) ttCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCg > 2:8328902/1‑150 (MQ=255) tCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCgg < 1:667585/150‑1 (MQ=255) ccGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCggg > 1:8003714/1‑150 (MQ=255) cGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGc > 2:3376247/1‑150 (MQ=255) cGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGc > 1:5864175/1‑150 (MQ=255) gTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAg < 1:7733747/150‑1 (MQ=255) gTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAg < 1:4667032/150‑1 (MQ=255) gTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAg < 1:5300557/150‑1 (MQ=255) aTGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGgcca < 2:8454926/150‑1 (MQ=255) aTGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGgcca > 1:6375030/1‑150 (MQ=255) aTGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGgcca < 2:371211/150‑1 (MQ=255) tGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGgccag > 1:2602881/1‑150 (MQ=255) tGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGgccag > 1:8721043/1‑150 (MQ=255) gACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGgccagc > 2:499556/1‑150 (MQ=255) aCGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGgccagcc < 2:1891711/150‑1 (MQ=255) ggggCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGccacca < 1:5495505/150‑1 (MQ=255) ggggCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGccacca > 1:5424566/1‑150 (MQ=255) ggCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACt > 2:2734408/1‑150 (MQ=255) aGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGc > 1:312908/1‑150 (MQ=255) gggggCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGATGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGcc < 2:7892710/150‑1 (MQ=255) gcatgc‑atCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCcgcgc < 1:6522118/150‑1 (MQ=255) catgc‑atCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCcgcgcg < 2:6726590/150‑1 (MQ=255) c‑atCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTg < 2:2362081/150‑1 (MQ=255) aatCGAGTGCCGCCCGCGCGGCGCTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTg > 2:5187053/2‑150 (MQ=255) aatCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGtgg > 2:4904067/2‑148 (MQ=255) atCGAGTGCCGCCCGCGCGGCGCTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTgg > 1:1866977/1‑150 (MQ=255) tCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTggg < 1:3217014/150‑1 (MQ=255) tCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTggg < 1:2863649/150‑1 (MQ=255) cGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTgggg < 1:135006/150‑1 (MQ=255) gAGTGCCGCCCGCGCGGCGCTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTGGGGt > 1:836980/1‑150 (MQ=255) aGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTGGGGTa < 2:1443849/150‑1 (MQ=255) aGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTGGGGTa > 2:1067697/1‑150 (MQ=255) cgccgcGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTGGGGTAgg < 1:5455632/150‑1 (MQ=255) gcgcgGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTGGGGTAGGGTGc > 1:3472703/1‑150 (MQ=255) gcgcgGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTGGGGTAGGGTGc > 2:2526171/1‑150 (MQ=255) cgcgGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTGGGGTAGGGTGcc < 1:7207766/150‑1 (MQ=255) cgggcggCACTCGAGTGCGCGCACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACGACGGCCGCGCGGTTGGGGTAGGGTGCCTg < 2:7097917/150‑1 (MQ=255) gggcggCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTGGGGTAGGGTGCCTgg < 1:3723346/150‑1 (MQ=255) | CAAGGGCCGGCGCATCAAAAAAGGGCGCTTTTGACCCGGGCGCGGGTTTTGAACCGAAATGGGGCGCAGGCCGGTGCCTGGCGGGAGAAAAAGGGAGTATTCCGGGTGCATGACGTGGGGCGGAGGGGGCATGC‑ATCGAGCGCCGCGCGGGCGGCACTCGATTGCGCGAACGCTGAATATCGTGAGACGGGCGCCTTCAGGGCGTCAGAGGCAGGCGTAGACCACCAGTTCCACCAGCATTTCTTCCCGGGCGAGGCCAGCCACCACTACGGCCGCGCGGTTGGGGTAGGGTGCCTGG > NC_002947/3084487‑3084784 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |