| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,336,357 | A→T | 5.1% | C213S (TGC→AGC) | nspC ← | carboxynorspermidine/carboxyspermidine decarboxylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,336,357 | 0 | A | T | 5.1% | 1036.2 / 28.4 | 339 | C213S (TGC→AGC) | nspC | carboxynorspermidine/carboxyspermidine decarboxylase |
| Reads supporting (aligned to +/- strand): ref base A (161/158); new base T (8/10); total (169/170) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.38e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.68e-01 | |||||||||||
Only 100 of 343 total aligned reads displayed.
CGAGCTGTCGACCACGGCCAGGTGCTTGCCGTTGTACAGGGTATCGAGCACGGTCACTTCCAGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGAAACGCTCTTCGATGTGCGTGAGCATCTTGTCGAACAGGCCGAAGTCACCGTTCTCGCAGTTGT > NC_002947/3336208‑3336506 | gCTGTCGACCACGGCCAGGTGCTTGCCGTTGTACAGGGTATCGAGCACGGTCACTTCCAGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGaa < 1:5483914/150‑1 (MQ=255) gCTGTCGACCACGGCCAGGTGCTTGCCGTTGTACAGGGTATCGAGCACGGTCACTTCCAGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGaa < 1:5320728/150‑1 (MQ=255) gCTGTCGACCACGGCCAGGTGCTTGCCGTTGTACAGGGTATCGAGCACGGTCACTTCCAGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGaa < 1:1789339/150‑1 (MQ=255) gTCGACCACGGCCAGGTGCTTGCCGTTGTACAGGGTATCGAGCACGGTCACTTCCAGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGc < 2:7181010/150‑1 (MQ=255) gTCGACCACGGCCAGGTGCTTGCCGTTGTACAGGGTATCGAGCACGGTCACTTCCAGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGc < 1:7994993/150‑1 (MQ=255) tCGACCACGGCCAGGTGCTTGCCGTTGTACAGGGTATCGAGCACGGTCACTTCCAGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTC‑TGCGCGCGCCTGAAGGCg < 1:4876877/150‑1 (MQ=255) ccACGGCCAGGTGCTTGCCGTTGTACAGGGTATCGAGCACGGTCACTTCCAGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTa > 2:3389146/1‑150 (MQ=255) ccACGGCCAGGTGCTTGCCGTTGTACAGGGTATCGAGCACGGTCACTTCCAGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTa > 1:7882367/1‑150 (MQ=255) ccACGGCCAGGTGCTTGCCGTTGTACAGGGTATCGAGCACGGTCACTTCCAGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTC‑TGCGCGCGCCTGAAGGCGttct < 2:6240074/150‑4 (MQ=255) cACGGCCAGGTGCTTGCCGTTGTACAGGGTATCGAGCACGGTCACTTCCAGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTAc > 2:1270206/1‑150 (MQ=255) cACGGCCAGGTGCTTGCCGTTGTACAGGGTATCGAGCACGGTCACTTCCAGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTAc < 1:4375224/150‑1 (MQ=255) cACGGCCAGGTGCTTGCCGTTGTACAGGGTATCGAGCACGGTCACTTCCAGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTAc > 2:1078553/1‑150 (MQ=255) aCGGCCAGGTGCTTGCCGTTGTACAGGGTATCGAGCACGGTCACTTCCAGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACt < 1:7755312/150‑1 (MQ=255) cGGCCAGGTGCTTGCCGTTGTACAGGGTATCGAGCACGGTCACTTCCAGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTC‑TGCGCGCGCCTGAAGGCGttctcgg < 1:6351707/150‑7 (MQ=255) cAGGTGCTTGCCGTTGTACAGGGTATCGAGCACGGTCACTTCCAGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATa > 2:2001893/1‑150 (MQ=255) cAGGTGCTTGCCGTTGTACAGGGTATCGAGCACGGTCACTTCCAGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATa < 2:2711426/150‑1 (MQ=255) ttGCCGTTGTACAGGGTATCGAGCACGGTCACTTCCAGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCa > 2:2069161/1‑150 (MQ=255) gCCGTTGTACAGGGTATCTAGCACGGTCACTTCCAGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCAcc > 2:2281414/1‑150 (MQ=255) gCCGTTGTACAGGGTATCGAGCACGGTCACTTCCAGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCAcc > 2:5657349/1‑150 (MQ=255) gCCGTGGTACAGGGTATCGAGCACGGTCACTTCCAGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCGACTGCATAGTCTTCAcc > 1:2623733/1‑150 (MQ=255) cGTTGTACAGGGTATCGAGCACGGTCACTTCCAGCGACGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCgg > 1:4944160/1‑150 (MQ=255) cGTTGTACAGGGTATCGAGCACGGTCACTTCCAGCGAAGCGGTGTTGGTGCTGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCgg < 1:8306340/150‑1 (MQ=255) gTTTTACAGGGTATCGAGCACGGTCACTTCCAGCTAAGCGCTTTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCTTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGgt < 1:637079/150‑1 (MQ=255) gTTGTACCGGGTATCGAGCACGGTCACTGCCAGCGAAGGGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGACCGCAGTCCGGCGCGCG‑CCGAAGGCGTCTACTGCATAGTCTTCACCGgt < 1:3116633/150‑1 (MQ=255) gTTGTACAGGGTATCGAGCACGGTCACTTCCAGCGAAGCGCTTTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGgt < 2:8027553/150‑1 (MQ=255) gTACCGGGTATCGAGCACGGTCACTTCCAGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGgtgaa < 2:7693481/150‑1 (MQ=255) aCAGGGTATCGAGCACGGTCACTTCCAGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGgtgaagt > 2:2931526/1‑150 (MQ=255) ctgggTATCGAGCACGGTCACTTCCAGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGATCCAGTTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGgtgaagtg < 2:832970/148‑1 (MQ=255) ccgggAATCGAGCCCGGGCACTTCCAGCGAAGCGCGGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTCAACCTGCACGCCGTATTTTTCCGCGACCGCCTACAGGCGCGCG‑CAGAAGGCGTCAACTGCATAGTCTTCACCGgtgaagtg < 2:3989302/148‑1 (MQ=255) aGGGTATCGAGCACGGTCACTTCCAGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGgtgaagtga > 1:3743259/1‑150 (MQ=255) gggTATCGAGCACGGTCACTTCCAGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGgtgaagtgaa > 2:184613/1‑150 (MQ=255) ggTATCGAGCACGGTCACTTCCAGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAAt > 1:4126028/1‑150 (MQ=255) gTATCGAGCACGGTCACTTCCAGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATg < 2:7312029/150‑1 (MQ=255) gAGCACGGTCACTTCCAGCGACGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTCAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCAGAGTCTTCCCCGGTGAAGTGAATgccgcc > 2:1052664/1‑150 (MQ=255) ggTCACTTCCAGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAg > 1:3932357/1‑150 (MQ=255) ggTCACTTCCAGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAg > 2:5267791/1‑150 (MQ=255) gTCAGTTCCAGCGACGCGGGGTTGGTGTGGGCGGGTTCGCCCGGCTCCTGGTAACCGTGGCGGCGGTTTTTTTCCGAGAACGCCTTCCGGCGCGCG‑CAGACGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGTATGCCGCCTCCAAgg < 2:5897022/150‑1 (MQ=255) gTCACTTCCTGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGTTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CATAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAgg < 2:368825/150‑1 (MQ=255) tCACTTCCAGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGc > 2:3262482/1‑150 (MQ=255) aCTTCCAGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTg > 1:3644965/1‑150 (MQ=255) aCTTCCAGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTg > 1:2475223/1‑150 (MQ=255) aCTTCCAGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTg > 2:4863079/1‑150 (MQ=255) ttCCAGCGCAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGAc > 2:6555493/1‑150 (MQ=255) ttCCAGCGAAGCGGTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGAc < 2:3321949/150‑1 (MQ=255) aGCGATGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCTGTTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCAc < 1:624319/150‑1 (MQ=255) aGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCAc > 2:8674563/1‑150 (MQ=255) cGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCTTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTc < 1:5615267/150‑1 (MQ=255) cGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCAcac > 1:8575795/1‑148 (MQ=255) aaGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGa > 1:5803950/1‑150 (MQ=255) cgcgcTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCCTCGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGAc > 2:8229319/2‑150 (MQ=255) gcggTGTTGTTGTTGGGGGCTTCGCCCGGCTCCAGTTAAACCTGCACGCCGTTTTTTTCCTAGAACGCCTTCAGGCGCGCG‑CATATGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGAcc < 1:4665736/150‑1 (MQ=255) tGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTtgt > 1:1289604/1‑150 (MQ=255) gTTGGTGTGGGCGGCTTCGCCCGGCTCCTGTTAAACCTGCACGCCGTATTTTTCCTAGAACGCCTTCCGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTtgtg < 1:6123172/150‑1 (MQ=255) aTGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGGCCCACTCGACCTTGTGCAGCAgg > 1:1870118/1‑150 (MQ=255) aTGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAgg > 2:3807339/1‑150 (MQ=255) aTGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAgg < 2:1653703/150‑1 (MQ=255) gcggcTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTgg > 2:2665194/1‑150 (MQ=255) gcggcTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTGGTGCAGCAGGTgg > 1:565331/1‑150 (MQ=255) gggcTTCGCCCGGCTCCTGGTAACCCTGCACGCCGTATTTTTCCGAGAACGCCTGCTGGCGCGCG‑CAGCCGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGc < 1:1028819/149‑1 (MQ=255) ggcTTCGCCCGGCTCCAGTTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGcc < 1:7309066/150‑1 (MQ=255) ggcTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGCGACCGCCTGCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGcc < 2:133175/150‑1 (MQ=255) ggcTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGcc > 1:8786085/1‑150 (MQ=255) ttCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGaa > 1:1195476/1‑150 (MQ=255) ttCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGaa > 1:5174313/1‑150 (MQ=255) ttCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGaa > 1:8172561/1‑150 (MQ=255) tCGCCCGGCTCCAGGTAAACCTGCACGCCTTATTTTTCCGAGAACGCCTTCCGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGaaa < 2:4671/150‑1 (MQ=255) tCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGACCGCCTTCAGGCGCGCG‑CATAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGaaa < 2:1780153/150‑1 (MQ=255) ccAGGTAACCCGGCCCGCCGTTTTTTTCCGCGAACGCCTTCCGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGAAACGCTCTTCGa < 1:946781/150‑1 (MQ=255) ccAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGAAACGCTCTTCGa < 2:1205987/150‑1 (MQ=255) cAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGAAACGCTCTTCGAt > 1:7545869/1‑150 (MQ=255) cAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGAAACGCTCTTCGAt < 2:5237614/150‑1 (MQ=255) cAGGTAAACCTGCACGCCGTATTTTTACGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAAAGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCCAAAAGCTCTTAGAt > 2:8140281/1‑150 (MQ=255) aGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGAAACGCTCTTCGAtg > 1:2319640/1‑150 (MQ=255) tAAACCTGCACGCCTTTTTTTTCCGCGAACGCCTTCAGGGGCGCG‑CAGTAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGAAACGCTCTTCGATGTGc < 2:2537049/150‑1 (MQ=255) tAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGATGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGAAACGCTCTTCGATGTGc < 2:4950491/150‑1 (MQ=255) aaCCTGCACGCCTTATTTTTCCGATAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGAAACGCTCTTCGATGTGCGt < 1:6989095/150‑1 (MQ=255) cTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGAAACGCTCTTCGATGTGCGagag > 1:8478852/1‑150 (MQ=255) cTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGAAACGCTCTTCGATGTGCGTGAg > 2:501811/1‑150 (MQ=255) gCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAgg < 1:3524048/88‑1 (MQ=255) ccGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGAAACGCTCTTCGATGTGCGTGAGCATCTTg > 2:4134305/1‑150 (MQ=255) cGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGAAACGCTCTTCGATGTGCGTGAGCATCTTGt > 1:4455464/1‑150 (MQ=255) tttttttcCCGAGACCGCCTTCTGGGGCGCG‑CAGACGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGAAACGCTCTTCGATGTGCGTGAGCATCTTGTc < 1:117661/147‑1 (MQ=255) ttATTTTTCCGAGAACTCCTTCAGGCGCGCG‑CATAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTTAATGCCGCCACCAAGGCTGACCCACTCGACATTGTGCAGAAGGTGGCCGAAACGCTCTTCGATTTGCGTGATCATCTTGTc < 2:8516375/149‑1 (MQ=255) gTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGACGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGAAACGCTCTTCGATGTGCGTGAGCATCTTGTc < 2:3150911/150‑1 (MQ=255) gTATTTGTCCGCGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGAAACGCTCTTCGATGTGCGTGAGCATCTTGTc < 2:1560663/150‑1 (MQ=255) tATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGAAACGCTCTTCGATGTGCGTGAGCATCTTGTCg > 2:4448546/1‑150 (MQ=255) ttttCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGAAACGCTCTTCGATGTGCGTGAGCATCTTGTCGAAc > 2:6783920/1‑150 (MQ=255) tttCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGAAACGCTCTTCGATGTGCGTGAGCATCTTGTCGAACa < 2:6984249/150‑1 (MQ=255) tttCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGAAACGCTCTTCGATGTGCGTGAGCATCTTGTCGAACa < 2:2509851/150‑1 (MQ=255) ttCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGAAACGCTCTTCGATGTGCGTGAGCATCTTGTCGAACAg > 1:8687469/1‑150 (MQ=255) ccGAGAACGCCTTCTGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGAAACGCTCTTCGATGTGCGTGAGCATCTTGTCGAACAGGc < 1:7501103/150‑1 (MQ=255) cGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGAAACGCTCTTCGATGTGCGTGAGCATCTTGTCGAACAGGcc > 1:2074948/1‑150 (MQ=255) cGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGAAACGCTCTTCGATGTGCGTGAGCATCTTGTCGAACAGGcc > 2:5518789/1‑150 (MQ=255) cGAGAACGCCTTCACGCGCGCG‑CAGAAGGCGTCTACAGCATAGACTTCACCGGTGAAGTCAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGCCCGAAACCCACTTCCATGTGCGAGACCAACTTGTCGAACAGGcc > 1:6538432/1‑150 (MQ=255) gagaACGCCGTCAGGCGCGCG‑CAGAAGGCGTCTACTGCAGAGTCGTCACCGGGGACGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGAAACGCTCTTCGCGGTGCGGGAGCCGCTGGGCGACCCGGCCg > 2:7450604/1‑150 (MQ=255) aCGCCTTCCGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGAAACGCTCTTCGATGTGCGTGAGCATCTTGTCGAACAGGCCGAAGt < 1:5855517/150‑1 (MQ=255) gCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGAAACGCTCTTCGATGTGCGTGAGCATCTTGTCGAACAGGCCGAAGTCa > 1:2147596/1‑150 (MQ=255) ttCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGAAACGCTCTTCGATGTGCGTGAGCATCTTGTCGAACAGGCCGAAGTCACCg > 1:3212495/1‑150 (MQ=255) cttctgcgcgcgcCTGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGaaa < 1:1247246/98‑1 (MQ=255) cgcg‑cAGACGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGAAACGCTCTTCGATGTGCGTGAGCATCTTGTCGAACAGGCCGAAGTCACCGTTCTCgaa < 2:5399200/150‑3 (MQ=255) | CGAGCTGTCGACCACGGCCAGGTGCTTGCCGTTGTACAGGGTATCGAGCACGGTCACTTCCAGCGAAGCGCTGTTGGTGATGGCGGCTTCGCCCGGCTCCAGGTAAACCTGCACGCCGTATTTTTCCGAGAACGCCTTCAGGCGCGCG‑CAGAAGGCGTCTACTGCATAGTCTTCACCGGTGAAGTGAATGCCGCCACCAAGGCTGACCCACTCGACCTTGTGCAGCAGGTGGCCGAAACGCTCTTCGATGTGCGTGAGCATCTTGTCGAACAGGCCGAAGTCACCGTTCTCGCAGTTGT > NC_002947/3336208‑3336506 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |