| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,377,810 | C→G | 12.3% | intergenic (+268/+24) | PP_2970 → / ← PP_2971 | hypothetical protein/transposase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,377,810 | 0 | C | G | 12.3% | 813.5 / 45.3 | 299 | intergenic (+268/+24) | PP_2970/PP_2971 | hypothetical protein/transposase |
| Reads supporting (aligned to +/- strand): ref base C (146/112); new base G (5/36); total (151/148) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.37e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 317 total aligned reads displayed.
GTTGTTTATGGGCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGATCAACTTGCCGCCCA > NC_002947/3377661‑3377958 | gttgttTATGGGCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAg‑c < 1:8726857/150‑1 (MQ=255) tgttTATGGGCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAg‑cgg < 2:1386967/150‑1 (MQ=255) gttTATGGGCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAg‑cggc > 2:6576359/1‑150 (MQ=255) gttTATGGGCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAg‑cggc < 2:7922640/150‑1 (MQ=255) tttATGGGCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAg‑cggcg > 1:5517679/1‑150 (MQ=255) ttATGGGCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGa < 2:3028249/150‑1 (MQ=255) ttATGGGCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGa > 1:6425462/1‑150 (MQ=255) tGGGCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTc < 1:571724/150‑1 (MQ=255) tGGGCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTc < 1:8444448/150‑1 (MQ=255) tGGGCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTc < 2:2049601/150‑1 (MQ=255) tGGGCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCG‑CCGCTGCAGAGGGCGATTc < 1:4524902/150‑1 (MQ=255) gggCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCG‑CCGCTGCAGAGGGCGATTCg < 1:5837564/150‑1 (MQ=255) ggCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCgg < 2:345781/150‑1 (MQ=255) gCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGc < 1:1936487/150‑1 (MQ=255) gCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGc < 2:7262300/150‑1 (MQ=255) gCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCG‑CCGCTGCAGAGGGCGATTCgga < 2:8392630/150‑2 (MQ=255) cACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGcc < 1:4931153/150‑1 (MQ=255) cTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATTATCGAATTCGGTTCGTTTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCAc < 1:7490978/150‑1 (MQ=255) cTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCAc > 2:2209813/1‑150 (MQ=255) cTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCAc > 2:100570/1‑150 (MQ=255) tCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACt > 1:6563756/1‑150 (MQ=255) tCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACt > 1:7289652/1‑150 (MQ=255) tCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACt > 2:5273801/1‑150 (MQ=255) tCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACt > 1:8559281/1‑150 (MQ=255) tCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACt > 1:3624917/1‑150 (MQ=255) taaTAACGCGATTTTTTATTTTAATCCGACCGAAAATTTATGGCAATGATCGAATTCGGTTCTATTTCTGCGGCTAATCACCGCTTTCTGGGCGTTGTCGCCCCTTTTTTCTACCTAATCGCCATCTGCAG‑CGGCTATTCGGCCCACTcc < 2:2793404/149‑1 (MQ=255) gAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTcc > 1:714233/1‑150 (MQ=255) aaTAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCg > 2:3154610/1‑150 (MQ=255) aTAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCgg > 1:3981093/1‑150 (MQ=255) tAACGCGAGGTTTTCAGGGAATCCGACCGCCAAATGATGGCCATGATCTAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCGGGGGGTTGTCGCCCCGTTTTTCTTCCTAATCGCCCTCTGCAG‑GGGCGATTCGGCCCACTCCggg < 2:641966/150‑1 (MQ=255) gcgAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTc > 1:7905193/1‑150 (MQ=255) gAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAg > 2:2952159/1‑150 (MQ=255) tttttttCAGTTAATCCGACCGCCAAATGATGGCCATGATCGATTTCGGTTCGATTTCTGCGGCTAATCACCGATTTCTGGGGGGTGTCGCCCCTTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATGCGGCCCACTCCGGGCGTCAGa < 2:625687/147‑1 (MQ=255) aGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGa > 2:7722672/1‑150 (MQ=255) ttttCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAgg > 2:3612867/1‑150 (MQ=255) ttCAGTGAATCCGACCGCCAACTGATGGCCATGATCGATTTCGGTTCGATTTCTGCGGCTAATCACCGCTTTCTGGGCGGTGTCGCCCCTTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGcc < 2:2773786/150‑1 (MQ=255) gtccgTGAAGCCGCCCGCCATCTGGGGGCCTTGATCGATGGGGGTGCGATGGCTGGGGCGACCCCCCGGTTGGGGGGGGGTGGCGCCCGGTTTTTCTTCCGAAGCGCCCCCGGCCG‑GGGGGCTGCGGCCCACTCCGGGCGTCAGAAGGcc < 2:4404167/146‑1 (MQ=255) tCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCAACGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCAGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCt > 2:8055122/1‑150 (MQ=255) cAGTGAATCCGACCGCCAATTGATGGCAATTATCGAATTCGGTTCTTTTTCTGCGGCTAATCACCGCTTTCTGGGCGGTGTCGCCCCTTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCtt < 2:1291224/150‑1 (MQ=255) gttaaTCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGa < 2:7855937/147‑1 (MQ=255) gTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGa > 2:4580429/1‑150 (MQ=255) tGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGAt > 1:2576115/1‑150 (MQ=255) tGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTGCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTGTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGAt > 2:6526781/1‑150 (MQ=255) tCCGACCGCCAATTGAGGGCCATGATCGAATGCGGTTGTTTTTCGGCGGCCAACCCCCGCTTTCGGGGCGGTGGCGCCCCGTTTTTCTTCCCAATCGCCCTCCGCCG‑CGGCCAGTCGCCCCACTCCGGGCGTCAGAAGGCCTTGATTccc < 2:2343478/150‑1 (MQ=255) cGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGc > 1:4986540/1‑150 (MQ=255) aCCGACAAATTATGTCAATCATCTATTTGTGTTCTATTTCTGCGTGTAATCACCGTTTTCTGGGCGGTGTCGCCCGTTTTTTGTTCCGAACCGCCCGCGGGAG‑CGGCTATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCt < 2:5884220/150‑1 (MQ=255) ccAATTGTTGGCATTGATCTATTTCGGTTCTTTTTCTGGGGCTAAACACCGCTTGGTGGGGGGTGTCGCCCGTTTTTTCTCCCGAATCGCCCTCTGCAG‑CGGCGTTTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTg < 2:3969036/150‑1 (MQ=255) attgatgGCCATTATCGAATTCGGTTCGTTTTCTGCGGCGAATCCCCGGTTTGTGGGGGGTGTCGCCCCGTTTTTCTCCCGAAGCGCCCTCTGCCG‑CGGCGATGCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGaa < 2:6846667/148‑1 (MQ=255) attgatgGCCATGTTCGATTTCGGTTCGTTTTCGGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGaa < 2:5438688/148‑1 (MQ=255) aaTGATGGCCATGATCGATTTGGGTTCGTTTTCTGCGGCGAACCCCCGCTTTCGGGGGGGGGTCGCCCGGTTTTCCTGCCGAATCGCCCCCCGCCG‑CGGCGTTTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGaa < 2:1494381/150‑1 (MQ=255) tgctgGCCATGATCGATTGGGGTGCGATTTCTGCGGCGAATCACCGCTTTCTGGGGGGTGTCGCCCGGTTTTTCTTCCGAATCGCCCTCTGCCG‑GGGCGTTTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGt < 2:1797132/147‑1 (MQ=255) ggCCATGATCGAATTCGGTTAGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTacac > 1:6618323/1‑150 (MQ=255) cATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAg > 2:5518250/1‑150 (MQ=255) cATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAg > 1:5952874/1‑150 (MQ=255) aTGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGc > 2:1682946/1‑150 (MQ=255) tttCGGTTCGATTGCTGCGGCTAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑GGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCaa < 2:5397658/149‑1 (MQ=255) ttCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAg > 2:7564786/1‑150 (MQ=255) gttctttttCTGGGGCTTATCACGGGTTGGTGGGGGGTGTCGCCCTGTTTTTCTTCCCACTCGCCCTCGGCTG‑GGGCGTTTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGt < 1:8275977/144‑1 (MQ=255) ttCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTa > 2:4278808/1‑150 (MQ=255) ttCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTa > 2:8184215/1‑150 (MQ=255) tCGATTTCTGCGGCTAATCACCGCTTTCTGGGGGGTGTCGCCCCTTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAg < 2:7414519/150‑1 (MQ=255) tCGATTTCGGCGGCGAATCCCCGCGTGCGGGGCGGGGGCGCCCCGTTTTCCTACCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAg < 2:6865906/150‑1 (MQ=255) ttCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGgc > 2:3539157/1‑150 (MQ=255) ggcgAATCCCGGCTTTGGGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCCG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCcat < 2:3858407/150‑1 (MQ=255) gctaaTCACCGGTTTCTGGGGGGTGCCGCCCCTTTTTTCTTCCGAAGCGCCCTCGGCAG‑GGGCGATCCGCCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCcatc < 1:4057496/147‑1 (MQ=255) aaTCACCGCTTTGTGGGGGGTGTCGCCCGGTTTTTCTTCCGAATCGCCCTCTGCCG‑GGGCTATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCatcatc < 1:3359541/150‑1 (MQ=255) aTCACCGCTTTGGGGGGGGTGTCGCCCCTTTTTCCTTCCCAATCGCCCTCCGCCG‑CGGCGTTGCGCCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCAtcatcg < 1:100570/150‑1 (MQ=255) aCCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCAtcatcgtca > 1:783769/1‑150 (MQ=255) ccGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCGAGGTGTAGCAGGCCGCCAtcatcgtcct > 2:6712308/1‑148 (MQ=255) ccGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCAtcatcgtcat > 2:7808002/1‑150 (MQ=255) ccGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCAtcatcgtcat > 1:3609830/1‑150 (MQ=255) cGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCAtcatcgtcatc > 2:476546/1‑150 (MQ=255) cGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCAtcatcgtcatc > 2:5952645/1‑150 (MQ=255) tgtGGGGGGTGTCGCCCCTTTTTTCTTCCCACTCGCCCTCTGCCG‑GGGCGTTGCGCCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCaaa < 1:3115149/148‑1 (MQ=255) tCTGGGGGGTGTCGCCCCTTTTTTCTCCCCAATCGCCCTCTGCCG‑CGGCTATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCaaa < 2:1126852/150‑1 (MQ=255) tGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTCCACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGt > 1:1308717/1‑150 (MQ=255) gggCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCACCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGtt > 2:2562667/1‑150 (MQ=255) ggCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCGTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTc > 1:2939982/1‑150 (MQ=255) gggTGGCGCCCGTTTTTGATCCCTAATCGCCCTCGGCCG‑CGGCTATTGGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTcgc < 1:1618812/149‑1 (MQ=255) ccccTTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCt < 2:6180294/150‑1 (MQ=255) cccGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTg > 2:7083214/1‑150 (MQ=255) ccGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGt > 2:195824/1‑150 (MQ=255) cGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTc < 2:8506845/150‑1 (MQ=255) gTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTcc > 2:5729345/1‑150 (MQ=255) tttCTTCCGAATCGCCCTCTGCCG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGAt < 2:7879736/150‑1 (MQ=255) tttCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGAt > 2:3678592/1‑150 (MQ=255) ttcCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTa > 1:620542/1‑150 (MQ=255) ttcCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTa > 1:5283494/1‑150 (MQ=255) gAAGCGCCCTCGGCTG‑CGGCTTTACGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGa < 1:6868216/150‑1 (MQ=255) aaTCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGAt > 1:2247691/1‑150 (MQ=255) aaTCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGAt > 1:1465985/1‑150 (MQ=255) cGCCCTCTGCTG‑GGGCTTTTGGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGATCaa < 1:7689619/150‑1 (MQ=255) gCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATAGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGATCAAc > 1:7321980/1‑150 (MQ=255) cccTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGATCAACt > 2:1926185/1‑150 (MQ=255) ccTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGATCAACtt > 1:439207/1‑150 (MQ=255) ctctGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGATCAACTTg > 1:1886652/1‑150 (MQ=255) ctctGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGATCAACTTg < 2:5116292/150‑1 (MQ=255) tctGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGATCAACTTgc > 1:8060110/1‑150 (MQ=255) aG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGATCAACTTGCCGccc > 1:3445239/1‑150 (MQ=255) g‑cggcgATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGATCAACTTGCCGCCCa < 2:4184591/150‑1 (MQ=255) | GTTGTTTATGGGCACCTCGAATAACGCGAGGTTTTCAGTGAATCCGACCGCCAAATGATGGCCATGATCGAATTCGGTTCGATTTCTGCGGCGAATCACCGCTTTCTGGGCGGTGTCGCCCCGTTTTTCTTCCGAATCGCCCTCTGCAG‑CGGCGATTCGGCCCACTCCGGGCGTCAGAAGGCCTTGATTCCCGCCTTCTGGAAGTACACCAGCCGCTTCAAGTTGTAGCAGGCCGCCATCATCGTCATCGCAAAGTTCGCGCGCCCCTGTCCGATGGTACGGATCAACTTGCCGCCCA > NC_002947/3377661‑3377958 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |