BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	3,441,191	T→C	5.9%	L45P (CTG→CCG) ‡	gpI →	tail formation protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	3,441,191	0	T	C	5.9%	1340.5 / 44.3	423	L45P (CTG→CCG) ‡	gpI	tail formation protein
Reads supporting (aligned to +/- strand): ref base T (197/200); new base C (10/15); total (207/216)
Fisher's exact test for biased strand distribution p-value = 4.12e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.14e-01

Only 100 of 459 total aligned reads displayed.

CGTCGAAGGTGGTGACATGAGCCTGTTACCGCACAACGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGATTCGGCGGGTGCTCAAGGCGGTTCGGGTCAACGCGG  >  NC_002947/3441042‑3441340

 gTCGAAGGTGGTGACATGAGCCTGTTACCGCACAACGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCctggctg                                                                                                                                                      <  1:479676/150‑1 (MQ=255)

 gTCGAAGGTGGTGACATGAGCCTGTTACCGCACAACGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCctggctg                                                                                                                                                      >  2:8020100/1‑150 (MQ=255)

  tCGAAGGTGGTGACATGAGCCTGTTACCGCACAACGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCGTGACCCGGACCTTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCctggctgg                                                                                                                                                     >  2:7856879/1‑150 (MQ=255)

          ggtgACATGAGCCTGTTACCGCACAACGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCAGGCCAGCCAGGGCa                                                                                                                                             <  2:7474924/150‑1 (MQ=255)

           gtgACATGAGCCTGTTACCGCACATCGCCACCCAGTTTGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTGGACCCGGACATTATCCGGGGCGTGGCCGACTCGTAACGCGGCCCGCCGAACTTCCTGCCCTGGctgggctggggtt                                                                                                                                            <  1:1875648/150‑4 (MQ=255)

            tgACATGAGCCTGTTACCGCACAACGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATg                                                                                                                                           >  2:3748360/1‑150 (MQ=255)

              aCATGAGCCTGTTACCGCACAACGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGa                                                                                                                                         >  1:4329185/1‑150 (MQ=255)

              aCATGAGCCTGTTACCGCACAACGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCAGGCCAGCCAGGGCaggaa                                                                                                                                         <  2:2725746/150‑5 (MQ=255)

               cATGAGCCTGTTACCGCACAACGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGaa                                                                                                                                        <  2:6670869/150‑1 (MQ=255)

               cATGAGCCTGTTACCGCACAACGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGaa                                                                                                                                        >  1:5021427/1‑150 (MQ=255)

                aTGAGCCTGTTACCGCACAACGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAg                                                                                                                                       <  2:1747035/150‑1 (MQ=255)

                         ttACCGCACAACGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGc                                                                                                                              >  2:1683656/1‑150 (MQ=255)

                             cGCACAACGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTggg                                                                                                                          >  1:2869826/1‑150 (MQ=255)

                              gCACAACGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGa                                                                                                                         >  1:7029728/1‑150 (MQ=255)

                               cacaACGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAg                                                                                                                        <  2:5107079/150‑1 (MQ=255)

                               cacaACGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAg                                                                                                                        >  2:2176635/1‑150 (MQ=255)

                                 caACGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTCTCCGGGGCGTGGCCGACTCGTCCCGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGACGGGCGAGGGCGGGGAggc                                                                                                                      >  2:3281783/1‑150 (MQ=255)

                                 caACGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAggc                                                                                                                      <  1:4166494/150‑1 (MQ=255)

                                   aCGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAggcgg                                                                                                                    <  1:109690/150‑1 (MQ=255)

                                    cGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCtggctggc                                                                                                                                                    >  1:1211953/1‑117 (MQ=255)

                                     gCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTGGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCt                                                                                                                  <  1:1113351/150‑1 (MQ=255)

                                         cccAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTaca                                                                                                              >  1:8034947/1‑150 (MQ=255)

                                         cccAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTaca                                                                                                              <  1:3227496/150‑1 (MQ=255)

                                          ccAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTacac                                                                                                             <  2:8632195/150‑1 (MQ=255)

                                            aGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACcg                                                                                                           <  1:7916840/150‑1 (MQ=255)

                                            aGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACcg                                                                                                           >  2:7053297/1‑150 (MQ=255)

                                             gTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACcga                                                                                                          >  2:6195005/1‑150 (MQ=255)

                                              ttGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACcgac                                                                                                         <  1:5094931/150‑1 (MQ=255)

                                              ttGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACcgac                                                                                                         <  1:1687039/150‑1 (MQ=255)

                                                ggAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACcgacga                                                                                                       >  1:5640107/1‑150 (MQ=255)

                                                 gAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCgacgac                                                                                                      <  2:2466415/150‑1 (MQ=255)

                                                   gcgcgcCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCa                                                                                                    >  1:502526/1‑150 (MQ=255)

                                                      cgcCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAgcg                                                                                                 >  2:6298399/1‑150 (MQ=255)

                                                           tGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCcgcg                                                                                            >  2:3855754/1‑150 (MQ=255)

                                                            ggAGGCGGCCGCCGACCCGGCCCGCGCCCCGGCCAGGCTCCGGGGCGTGGCCGACTCGGCACGCTGCCCGCCGACCGGCCGGCCCGGGCGGGCCGGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCCTCCCCCGACGACCAGCGCcgcgc                                                                                           <  2:1790375/150‑1 (MQ=255)

                                                             gAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCcgcgcg                                                                                          >  2:1114995/1‑150 (MQ=255)

                                                             gAGGCGGCCGCCGACCGTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCcgcgcg                                                                                          <  2:4660860/150‑1 (MQ=255)

                                                              cggcggcCGCCGACCTTGGCCTTGACCCGGACATGATCCGGGGCGTGGCCGACTCGTCACGCGGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCgcgcgc                                                                                         <  1:7097598/149‑1 (MQ=255)

                                                                gcggcCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTg                                                                                       >  2:8203674/1‑150 (MQ=255)

                                                                gcggcCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTg                                                                                       >  2:683102/1‑150 (MQ=255)

                                                                  ggcCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCGCGGCGCTggt                                                                                     <  2:7193742/150‑3 (MQ=255)

                                                                    ccgccgACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATcc                                                                                   >  1:3934977/1‑150 (MQ=255)

                                                                       ccgACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCGCGGCGCTGGTcgtcg                                                                                <  2:812171/150‑5 (MQ=255)

                                                                        cgACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGa                                                                               <  2:4896366/150‑1 (MQ=255)

                                                                        cgACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGa                                                                               <  2:529075/150‑1 (MQ=255)

                                                                        cgACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGa                                                                               >  1:8725873/1‑150 (MQ=255)

                                                                        cgACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGa                                                                               <  1:1504936/150‑1 (MQ=255)

                                                                        cgACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGa                                                                               <  2:6467818/150‑1 (MQ=255)

                                                                        cgACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGa                                                                               <  1:7520278/150‑1 (MQ=255)

                                                                        cgACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGa                                                                               <  2:756748/150‑1 (MQ=255)

                                                                           ccTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGc                                                                            <  2:5918872/150‑1 (MQ=255)

                                                                                gCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCTGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTc                                                                       <  1:1004631/150‑1 (MQ=255)

                                                                                 ccTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTcc                                                                      >  2:694645/1‑150 (MQ=255)

                                                                                   acgccccGGATAATGTCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCgg                                                                    >  1:8211232/5‑150 (MQ=255)

                                                                                     gACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGtt                                                                  <  1:5746460/150‑1 (MQ=255)

                                                                                      ccccGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCAGTCCGGTTc                                                                 >  2:6346539/2‑150 (MQ=255)

                                                                                      aCCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTc                                                                 <  2:83564/150‑1 (MQ=255)

                                                                                        ccGGACAGTCTCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTcac                                                               <  1:5969564/150‑1 (MQ=255)

                                                                                          ggACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTTCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACaa                                                             >  1:2423167/1‑150 (MQ=255)

                                                                                          ggACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACaa                                                             >  1:4543555/1‑150 (MQ=255)

                                                                                          ggACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACaa                                                             <  1:948934/150‑1 (MQ=255)

                                                                                          ggACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACaa                                                             <  1:3037143/150‑1 (MQ=255)

                                                                                          ggACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCGGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACaa                                                             >  1:1415379/1‑150 (MQ=255)

                                                                                              aatgtCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGAcc                                                         >  2:1967455/5‑150 (MQ=255)

                                                                                              aTTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGAcc                                                         >  1:6463514/1‑150 (MQ=255)

                                                                                                 aTCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAg                                                      >  2:8387441/1‑150 (MQ=255)

                                                                                                 aTCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAg                                                      <  1:5441961/150‑1 (MQ=255)

                                                                                                  tCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAgg                                                     <  1:2135366/150‑1 (MQ=255)

                                                                                                  tCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAgg                                                     >  1:8579391/1‑150 (MQ=255)

                                                                                                  tCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAgg                                                     >  2:5590745/1‑150 (MQ=255)

                                                                                                  tCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAgg                                                     <  2:4402949/150‑1 (MQ=255)

                                                                                                  tCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAgg                                                     >  1:2819118/1‑150 (MQ=255)

                                                                                                    cGGGGAGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGc                                                   >  1:1296551/1‑150 (MQ=255)

                                                                                                      gggCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCAc                                                 >  2:3098977/1‑150 (MQ=255)

                                                                                                           tGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCg                                            >  1:6764093/1‑150 (MQ=255)

                                                                                                             gCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGgc                                          >  1:1992149/1‑150 (MQ=255)

                                                                                                                 aCTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGa                                      <  1:2253148/150‑1 (MQ=255)

                                                                                                                   tCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGAtt                                    >  1:5310738/1‑150 (MQ=255)

                                                                                                                     gTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGATTcg                                  >  1:3122576/1‑150 (MQ=255)

                                                                                                                      tCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGATTcgg                                 <  2:7770309/150‑1 (MQ=255)

                                                                                                                         cGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGATTcggcgg                              <  2:4366724/150‑1 (MQ=255)

                                                                                                                         cGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGATTcggcgg                              <  2:2373678/150‑1 (MQ=255)

                                                                                                                            tGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGCTTCGGCGGGTg                           >  2:6062912/1‑150 (MQ=255)

                                                                                                                              cccGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGATTCGGCGGGTGCt                         >  1:7629603/1‑150 (MQ=255)

                                                                                                                                 gccgAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGATTCGGCGGGTGCTCaa                      >  1:8377010/1‑150 (MQ=255)

                                                                                                                                  ccgAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGATTCGGCGGGTGCTCAAg                     <  1:6195012/150‑1 (MQ=255)

                                                                                                                                  ccgAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGATTCGGCGGGTGCTCAAg                     >  2:2761187/1‑150 (MQ=255)

                                                                                                                                  ccgAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGATTCGGCGGGTGCTCAAg                     >  2:1411944/1‑150 (MQ=255)

                                                                                                                                    gAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGATTCGGCGGGTGCTCAAGGc                   >  2:7284817/1‑150 (MQ=255)

                                                                                                                                    gAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGATTCGGCGGGTGCTCAAGGc                   >  2:3483944/1‑150 (MQ=255)

                                                                                                                                      aCTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGATTCGGCGGGTGCTCAAGGCgg                 <  1:3689571/150‑1 (MQ=255)

                                                                                                                                        ttCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGACTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGATTCGGCGGGTGCTCAAGGCGGtt               >  1:1353708/1‑150 (MQ=255)

                                                                                                                                         tCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGATTCGGCGGGTGCTCAAGGCGGTTc              <  2:5382574/150‑1 (MQ=255)

                                                                                                                                         tCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGATTCGGCGGGTGCTCAAGGCGGTTc              <  2:212230/150‑1 (MQ=255)

                                                                                                                                           cTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGATTCGGCGGGTGCTCAAGGCGGTTCgg            <  1:6679274/150‑1 (MQ=255)

                                                                                                                                           cTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGATTCGGCGGGTGCTCAAGGCGGTTCgg            <  2:5706669/150‑1 (MQ=255)

                                                                                                                                           cTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGATTCGGCGGGTGCTCAAGGCGGTTCgg            >  1:4688679/1‑150 (MQ=255)

                                                                                                                                            tGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGATTCGGCGGGTGCTCAAGGCGGTTCggg           >  2:4195633/1‑150 (MQ=255)

                                                                                                                                             gCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGATTCGGCGGGTGCTCAAGGCGGTTCGGGt          <  2:4632457/150‑1 (MQ=255)

                                                                                                                                                   gctggcCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGATTCGGCGGGTGCTCAAGGCGGTTCGGGTCAAcgc    <  1:6123130/150‑1 (MQ=255)

CGTCGAAGGTGGTGACATGAGCCTGTTACCGCACAACGCCACCCAGTTGGAGCGCGCCCTGGAGGCGGCCGCCGACCTTGGCCTTGACCCGGACATTATCCGGGGCGTGGCCGACTCGTCACGCTGCCCGCCGAACTTCCTGCCCTGGCTGGCCTGGGCATGGAAGGTCGAGGGCTGGGAGGCGGCTTACACCGACGACCAGCGCCGCGCGCTGATCCGCGAGGCCATTCCGGTTCACAAGACCAAGGGCACGGTCGGCGCGATTCGGCGGGTGCTCAAGGCGGTTCGGGTCAACGCGG  >  NC_002947/3441042‑3441340

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`