| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,471,833 | T→G | 23.2% | intergenic (‑16/+108) | PP_3081 ← / ← PP_5560 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,471,833 | 0 | T | G | 23.2% | 547.8 / 62.3 | 316 | intergenic (‑16/+108) | PP_3081/PP_5560 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (51/169); new base G (60/15); total (132/184) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.83e-18 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 319 total aligned reads displayed.
CGCGTACCTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTGGCTC > NC_002947/3471684‑3471981 | cgcgTACCTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCt < 2:1822631/150‑1 (MQ=255) gTACCTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTgcg < 1:8350336/150‑1 (MQ=255) gTACCTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTgcg < 1:92235/150‑1 (MQ=255) aCCTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCCCCggcggc > 1:4094403/1‑150 (MQ=255) tGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCggcggc < 2:3730545/150‑1 (MQ=255) tGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCggcggc > 1:6374046/1‑150 (MQ=255) gggCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCaa < 2:7401715/150‑1 (MQ=255) gggCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGCAGGCGGCCaa < 1:2175621/150‑1 (MQ=255) gggCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGCAGGCGGCCaa < 1:131530/150‑1 (MQ=255) gggCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGACCCCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGCAGGCGGCCaa < 2:5509749/150‑1 (MQ=255) gggCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGACACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCaa < 2:115411/150‑1 (MQ=255) gCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACg < 2:2447307/150‑1 (MQ=255) aGGTTGTCCCAGCTCAGTTGGGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTTAAAGACGAGGAACTGACCGACTTCGCGCCTTGGCCGCCTGCGGCGGCCAACGCt < 1:995481/150‑1 (MQ=255) aGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCAAcccg > 1:5731572/1‑147 (MQ=255) gTTGTCCCCGCTAAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCGGGGTCGTGGCCGACCTGTTGCAGGGAATTGACGCCGCCATCATTGAAAGACGAGGAACTGACCGACATCGGGCATTGGCCGCCTGCGGCGGCCAACGCtgt < 2:4786784/150‑1 (MQ=255) gTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCtgt > 2:6240107/1‑150 (MQ=255) ccAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAggg > 2:8715684/1‑150 (MQ=255) cAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCCACGCAGTGCAGGgc > 2:3017197/1‑150 (MQ=255) cAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGgc > 2:8214899/1‑150 (MQ=255) aGCTCTGTTGGGGGGTCCGCTCTTCACCGGCACCGCTTGCCGGGTCCTGGCCGACCTGTTGCTGGGCAATGACGCCGCCATCAGTGAAAGACGAGTAACTGACCGACATCGCGCCTTGGCGGCCTGCGGCGGCCAACGCTGTGCAGGgca < 1:4763753/150‑1 (MQ=255) cTCAGTTGGGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGACAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGgcagc < 2:1953228/150‑1 (MQ=255) cTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGGCGCCGGCCGGGGCCCACCCGGGGGAGGgcagc > 1:6207600/1‑150 (MQ=255) ttttGGGGGGTCCGCTCTCCACCGGCACCGCTTGCGGGGTCCTGGCCGACCTGTTGCTGGGAAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCaaa < 1:624178/148‑1 (MQ=255) aGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCaaa < 2:2056728/150‑1 (MQ=255) gTTGGGGGGCCCGCTCTTCACCGGCACCGCTTGCGGGGTCCTGGCCGACCTGTTGCTGGGCATTGACGCCGCCATCAGTGAATGACGTGGAACTGACCGACATCGCGCCTTGGCCGCCTGGGGCGGCCAACGCTGTGCAGGGCAGCAAag < 1:2645090/150‑1 (MQ=255) gTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGTAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCCCCAGCGGCCGCCCACCCGCTGCCGGgcccccaac > 1:3816230/1‑143 (MQ=255) gggggTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCCGGGCAATGACGCCGCAATCAGTGAAAGACGAGTAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAagcagc < 1:8551317/149‑1 (MQ=255) gggggTCCGCTATTCACCGGCACCGCATGCGGGGTCCTGGCCTACCTGTTGCTGGGAAATGACGCCGCCATCAGTTAAAGACTTGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAagcagc < 1:8388892/149‑1 (MQ=255) cGGGGTCCGCTCTTCACCGGCACCGCATGCGGGGTCCTGGCCGACCTGTTGCAGGGCAATGCCGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAagcagc < 1:2844245/150‑1 (MQ=255) ggggTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCg < 2:6491815/150‑1 (MQ=255) ggTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGaa < 2:2158010/150‑1 (MQ=255) tCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACa < 2:8801363/150‑1 (MQ=255) ccGGTCTCCACCGGGACCGCTTGCCGGGTGCTGGCGGAGCTTTTGCGGGGCAATGACGCCGCCTTCTGTGATAGACGAGGAAGTGACCGAAATCGCGCCTTGGCGGCCTGGGGCGGCCAACGCTGTGCAGGTCAGCAAAGCAGCGAACAg < 2:6145110/150‑1 (MQ=255) cGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGGCGCCAGCGGCGGCCAAACCGGGGCCGGGCAGCAAAGCAGCGCACAGc > 1:6095822/1‑150 (MQ=255) gCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGGCGCCGGCCGCGGCCCACCCAGTGCCGGGCCCCAAAACAGCGAACAccc > 1:7526740/1‑150 (MQ=255) gCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGGCCCCAGCGGCGGCCAACGCGGTGCGGGGCAGCAAAACAGCGAACAGcc > 1:7032398/1‑150 (MQ=255) ctctTCACCGGCACCGCTTGCGGGGTCCTGGCCGACGTGTTGCTGGGCAATGACGCCGCCATCTGTTAAAGAGGAGTAACTGACCGACAGGGCGCGTTGGCCGCCGGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCa < 1:4749462/150‑1 (MQ=255) ctctTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCAGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGccc > 2:8517337/1‑149 (MQ=255) ttCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCCCCGCGGTGCCGGGCCGCAAAGCAGCGCACACCCAggg > 1:8007227/1‑148 (MQ=255) ttCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCCGCGGCCCAACCAGTGCACGGGAGCAAAGCATCCAACAACCacgg > 1:4473216/1‑147 (MQ=255) tCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCCACGCTGTGCAGGGCACCAAACCAGCGAACAGCCCgtgt > 2:1629521/1‑150 (MQ=255) aCCGGCACCGCATGCGGGGTCGGGGCCGACCTGTGGCAGGGCAATGACGCCGCCATCTGTGAATGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCt < 1:4005517/150‑1 (MQ=255) cGGCACCGCTTGCGGGGTCGTGGCCGACCTGTGGCCGGCCAATGACGCCGCCATCATTGAACGACGCGTACCTGACCGACAGCGCGCTTTGGCCGCCTGGGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGa < 1:1799420/150‑1 (MQ=255) cGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCCACGCGGTGCCGGGCAGCAAAGCAGCGAACAGCCAGGGTcggg > 2:6189148/1‑147 (MQ=255) cGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCAGCGGCGGGCAACGCGGTTGAGGGCACCAAAGCAGCGAACACCCAGGGTGTGAGGTGCa > 1:1963178/1‑150 (MQ=255) aTGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATgg < 2:4989167/150‑1 (MQ=255) gCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCCGCGGCCCACCCGGGGCAGGGCACCCAACCAGCGAACACCCCCAGTCGGAGGTggggggtg > 1:1061942/1‑143 (MQ=255) ccGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCCGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCa > 2:8523457/1‑150 (MQ=255) gggTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTGGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAAt < 2:6385383/150‑1 (MQ=255) tCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCt < 1:3601731/150‑1 (MQ=255) ccgggCCGACCTGTTGCCGGGCAATGACGCCGCCACCATTGAAAGCCGAGGAACTGACCCACAGGGCGCCTGGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCtt < 1:3165276/147‑1 (MQ=255) ccTGGCCGACGTGTTGCAGGGCAATGACGCCGCCTTCTTTGAATGAGGTGTAACTGACCGCCATCGGCCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCtt < 1:5380705/150‑1 (MQ=255) ccTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCtt < 2:4608019/150‑1 (MQ=255) ccTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCtt < 2:1409928/150‑1 (MQ=255) ccTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCtt < 2:506587/150‑1 (MQ=255) cTGGCCGACCTGTTGCTGGGAACTGCCGCCGCAATCTGTTAAAGACGTGTAAGTGACCGACATCGCGCGTTGGCCGCCTGGGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTg < 1:1505341/150‑1 (MQ=255) tGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCCACCCGGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCGGAGGTGCCAGGTCAAACCTTgg > 2:7684203/1‑150 (MQ=255) cGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAgg < 2:2667857/150‑1 (MQ=255) aCCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCACTGTCTGAGGTGCATGGTCAAACCTTGGCAGGGc > 2:4381079/1‑150 (MQ=255) ttGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCCGCGGCCGCCCACGCGGGGCAGGGCCCCAAACCACCGAACACCCCGGGGCGGTGGTGCCTGGTCAATCCGTGGCCGGGCGGCAc > 2:2316416/1‑150 (MQ=255) gccgggCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACgg < 1:5924454/147‑1 (MQ=255) gCAGGGCAATGACGCCGCCATCAGTGAAAGACGCGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACgg < 2:5754349/150‑1 (MQ=255) gCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCAACCCGGGGCAGGGCAGCAAAGCAGCGAAAAGCCCGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACgg > 2:6896917/1‑150 (MQ=255) cAGGTCAATTCCCCCGCAATCAGTTAAAGAGGCGCAAGTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGc < 1:2937096/150‑1 (MQ=255) cAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGc < 1:8214899/150‑1 (MQ=255) aGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACCTCGCGCCTTGGCCCCCGGCGGCGGCCCACCCTGTGCAGGGCAGCAAAGCAGCGCACAGCCCGGGTCGGGGGTGCATGGTCCATCCATGGCAGGGCGTCACGGcg > 2:7876042/1‑149 (MQ=255) aGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCCGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTTGCAGGGCGTCACGGcg > 2:3435886/1‑149 (MQ=255) aGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCCTGGTCAATCCTTGGCAGGGCGTCACGGCt > 2:7134545/1‑150 (MQ=255) gggCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCAACGCAGTGCAGGGCCGCAAACCAGCCAACAGCCAGTGTCTGAGGTGCCTGGTCAATCCTTGGCAGGGCGGCACGGcgc > 1:7948110/1‑148 (MQ=255) ggCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCa < 2:4956460/150‑1 (MQ=255) cAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCAACCCGGTGCCGGGCAGCAAATCAGCGCACAGCCCGTGTGTGAGGTGGATGGTCAAACCGTGGGCGGGCGTCACCGCGCact > 2:3311927/1‑148 (MQ=255) cgccATCAGTGAAAGACGCGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAg < 1:481219/150‑1 (MQ=255) ctgTGAACGACGAGGAACTGCCCGACATCGCGCCTGGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGc < 1:4570865/148‑1 (MQ=255) cAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGc < 2:8381084/150‑1 (MQ=255) gTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCtt < 2:7333508/150‑1 (MQ=255) gTGAAAGACGAGGAACTGACCGACATCGCGCCTGGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCtt < 1:565067/150‑1 (MQ=255) aataCGAGGAAGTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGc < 1:7137354/147‑1 (MQ=255) aaGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGc < 2:5584683/150‑1 (MQ=255) gACGAGGAACTGACCGACATCGCGCCTTGGCCGCCGGCGGCGGCCAACGCTGTGCCGGGCAGCAAAGCAGCGGACACCCACGGTCTGTGGTGGATGGTCAATACATGGGAGGGCGTCAACGCGCAGTGAAGCCCCCGTCTGCTTCAGCgg > 2:5197839/1‑150 (MQ=255) ggAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTc < 2:1299662/150‑1 (MQ=255) ggAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTc < 2:5420659/150‑1 (MQ=255) cGACATCGCGCCTTGGCCGCCGGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGCACAGCCAGGGTCTGTGGTGCATGGTCCATCCTTGGCAGGGCGTCACGGCGCAGTCTAGCCCACGTCTGCGTCAGCGGCTGTCCTGGTccgc > 2:7123676/1‑148 (MQ=255) gACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCg < 2:591473/150‑1 (MQ=255) aCATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCgg < 1:6825891/150‑1 (MQ=255) aTCGCGCGTGGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCa < 2:2746831/150‑1 (MQ=255) aTCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCa < 1:3493337/150‑1 (MQ=255) aTCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCa < 2:752837/150‑1 (MQ=255) gcCTTGGCCGCCAGCGGCGGCCAACCCAGTGCAGGGCAGCAAAGCAGCCAAAAGCCCCTGTCTGAGGTGCAAGGTCAAACCTTGGCACGGCGTCACCGCTCAGTCAAGCCCCCGGCGGCTTCAGCGGCTGTCCAGGTCCTCGGCAGTGcc > 2:5994314/1‑150 (MQ=255) cTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTc < 2:3334054/150‑1 (MQ=255) cTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTc > 2:6877127/1‑150 (MQ=255) ttGGCCGCCGCAGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTcc > 1:2380308/1‑150 (MQ=255) ggCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGc > 2:6789341/1‑150 (MQ=255) ggCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGc > 2:3534676/1‑150 (MQ=255) gccgccTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCt > 2:726102/1‑150 (MQ=255) ccgccTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTg > 1:5527599/1‑150 (MQ=255) cgccTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTgg > 1:375051/1‑150 (MQ=255) gccTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTGGc > 1:5255745/1‑150 (MQ=255) gccTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTGGc < 2:8026867/150‑1 (MQ=255) cTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTGGCTc < 1:548106/150‑1 (MQ=255) cTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTGGCTc < 2:4094403/150‑1 (MQ=255) | CGCGTACCTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTGGCTC > NC_002947/3471684‑3471981 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |