| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 295,759 | T→G | 8.6% | intergenic (+106/+36) | PP_0241 → / ← PP_0242 | transporter/TetR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 295,759 | 0 | T | G | 8.6% | 990.3 / 61.8 | 318 | intergenic (+106/+36) | PP_0241/PP_0242 | transporter/TetR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (164/121); new base G (24/3); total (194/124) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.53e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.56e-01 | |||||||||||
Only 100 of 321 total aligned reads displayed.
TGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCATGCGCGGGGTGATCGCCTCGTGCAGCTGCACCGA > NC_002947/295611‑295908 | ccTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGc > 2:1654178/1‑150 (MQ=255) cTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGcc > 1:234509/1‑150 (MQ=255) tttGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGccc < 1:4410612/150‑1 (MQ=255) tttGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGccc > 2:683882/1‑150 (MQ=255) gtatctggggttgtatctgccgccgtttctggccaagcgttccagctgagaaatctggggctgctttgcagcccttcgccggcacGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGccc > 1:6304252‑M1/86‑150 (MQ=255) gtgAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCcgcg > 1:7138179/1‑150 (MQ=255) ctggggttgtatctgccgccgtttctggccaagcgttccagctgagaaatctggggccgcttggcggcccttcgccggcacGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGa > 2:5941082‑M1/82‑150 (MQ=255) gggggtgtatctgccgccgtttctggccaagcgttccagctgagaaatctggggccgctttgcagcccttcgccggcacGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAg > 2:2319874‑M1/80‑150 (MQ=255) gACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGgccg > 1:5347393/1‑150 (MQ=255) gtatctgccgccgtttctggccaagcgttccagctgagaaatctggggccgcttggcagcccttcgccggcacGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGgccgc > 2:2792139‑M1/74‑150 (MQ=255) aCCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGgccgc < 2:3835886/150‑1 (MQ=255) aCCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGgccgc > 2:895104/1‑150 (MQ=255) gAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCaa < 2:1779544/150‑1 (MQ=255) tgtCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCgg > 2:6129412/1‑150 (MQ=255) gtCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGc < 2:8176432/150‑1 (MQ=255) cTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGccc > 1:2681248/1‑150 (MQ=255) tATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGcccc > 1:4715129/1‑150 (MQ=255) aTCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCa > 1:5776459/1‑150 (MQ=255) aTCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCa < 1:5527488/150‑1 (MQ=255) tCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAg > 2:5332719/1‑150 (MQ=255) tCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAg > 2:7754816/1‑150 (MQ=255) ccAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCTTGGCGGcccttcgcg < 1:1022049/150‑7 (MQ=38) aaGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTtc > 1:2777924/1‑150 (MQ=255) gCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTtctc < 1:2243077/150‑1 (MQ=255) tgtgATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAg > 1:7475971/1‑150 (MQ=255) tgATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCt < 2:3577169/150‑1 (MQ=255) tgATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCt > 2:6265956/1‑150 (MQ=255) aTGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTgg > 1:2863411/1‑150 (MQ=255) gggTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCtt < 2:3307982/150‑1 (MQ=255) gggTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCtt < 1:8533277/150‑1 (MQ=255) ggTCGATTTTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTg < 1:2113302/150‑1 (MQ=255) ggTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTg < 2:5482195/150‑1 (MQ=255) ggTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTg < 1:2989695/150‑1 (MQ=255) ggTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTg < 1:1904180/150‑1 (MQ=255) ggTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTg < 1:7636010/150‑1 (MQ=255) gTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTgg < 1:3399053/150‑1 (MQ=255) cGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGcc > 1:5439898/1‑150 (MQ=255) tggggccgcttggcggcccttcgcgggcaagcccgctcccacagagcccgcgcgcaccctggagcttgcgagtacctgtgggagcgggcGTGCCGGCGAAGGGCTGCAAAGCAGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAAc > 1:1341707‑M2/90‑150 (MQ=255) gggCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAAcgg > 1:6202957/1‑150 (MQ=255) gccgcttggcggcccttcgcgggcaagcccgctcccacagagcccgcgcgcaccctggagcttgcgagtacctgtgggagcgggcGTGCCGGCGAAGGGCTGCAAAGCAGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAAcggcg > 1:8495609‑M2/86‑150 (MQ=255) tgctTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGACACggcggc > 2:1980092/1‑150 (MQ=255) tttGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGa < 2:7898693/150‑1 (MQ=255) gCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGTGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATAc < 1:3202951/150‑1 (MQ=255) gCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATAc > 2:797094/1‑150 (MQ=255) cccTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAAcc > 2:4894045/1‑150 (MQ=255) ccTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAAccc < 1:479313/150‑1 (MQ=255) ttCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCa < 2:2479769/150‑1 (MQ=255) cGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATAc > 2:7128939/1‑150 (MQ=255) cGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTc < 1:4609734/150‑1 (MQ=255) cGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTc < 1:6263661/150‑1 (MQ=255) GCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCg > 2:6753156‑M1/1‑150 (MQ=255) GCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCg < 2:8591043‑M1/150‑1 (MQ=255) CCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGa < 1:1095640‑M1/150‑1 (MQ=255) CCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGa < 2:5148278‑M1/150‑1 (MQ=255) CCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGaa < 2:4461724‑M1/150‑1 (MQ=255) CCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGaa < 2:4342626‑M1/150‑1 (MQ=255) CCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGaa > 2:3235052‑M1/1‑150 (MQ=255) ctcccacagagcccgcgcgcaccctggagcttgcgagtacctgtgggagcgggcTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAacac > 2:5052206‑M2/55‑150 (MQ=255) tcccacagagcccgcgcgcaccctggagcttgcgagtacctgtgggagcgggcGTGCCGGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACAcc > 1:6054363‑M2/54‑150 (MQ=255) TCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACAcc < 2:6371033‑M1/150‑1 (MQ=255) CCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACACTTCGAACACCCg < 2:6618844‑M1/150‑1 (MQ=255) cacagagcccgcgcgcaccctggagcttgcgagtacctgtgggagcgggcTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGc > 1:4913509‑M2/51‑150 (MQ=255) cacagagcccgcgcgcaccctggagcttgcgagtacctgtgggagcgggcGTGCCGGCGAAGGGCTGCAAAGCAGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGc > 2:6487673‑M2/51‑150 (MQ=255) cacagagcccgcgcgcaccctggagcttgcgagtacctgtgggagcgggcGTGCCGGCGAAGGGCTGCAAAGCAGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGc > 1:2487842‑M2/51‑150 (MQ=255) cagagcccgcgcgcaccctggagcttgcgagtacctgtgggagcgggcTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCtt < 1:6376744‑M2/102‑1 (MQ=255) CAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCtt < 1:945217‑M1/150‑1 (MQ=255) agagcccgcgcgcaccctggagcttgcgagtacctgtgggagcgggcTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTg > 1:4495024‑M2/48‑150 (MQ=255) AGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTg > 1:1193126‑M1/1‑150 (MQ=255) GGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGc > 2:8501511‑M1/1‑150 (MQ=255) agcccgcgcgcaccctggagcttgcgagtacctgtgggagcgggcGTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGcc > 2:4654946‑M2/46‑150 (MQ=255) cccgcgcgcaccctggagcttgcgggctctgtgggagcgggcTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTc > 1:7877455‑M2/43‑150 (MQ=255) tCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCa > 2:8008441/1‑97 (MQ=255) tCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTcc > 1:1991513/1‑150 (MQ=255) cGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCt > 1:5867884/1‑150 (MQ=255) gCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTc > 2:7552556/1‑150 (MQ=255) gCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTc < 1:1558537/150‑1 (MQ=255) gCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTc < 2:602184/150‑1 (MQ=255) cAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCg > 2:2138224/1‑150 (MQ=255) aaGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCgg > 2:4042728/1‑150 (MQ=255) gCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGcc > 2:4588231/1‑150 (MQ=255) caccctggagcttgcgagtacctgtgggagcgggcGTGCCGGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCTAACACCCGCTTGCCTTCCTCGGcc < 1:5941082‑M2/115‑1 (MQ=255) tCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCAt > 1:8093558/1‑150 (MQ=255) tCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGAGACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCAt > 2:8323680/1‑150 (MQ=255) ccAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCATg > 2:814615/1‑150 (MQ=255) cAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCATgc > 2:2566019/1‑150 (MQ=255) cAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCATgc > 1:3730408/1‑150 (MQ=255) ggTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCATGcgcg > 1:6504435/1‑150 (MQ=255) cgcgcgGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCCGCTGGAACGCTTGGCCAGAAACGGCGGCATATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCATGCACgaggc < 2:4354634/150‑2 (MQ=255) tctGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGCAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCATGCGCGGGGTGATCGCCTc > 2:5841644/1‑150 (MQ=255) tgtgggagcgggcTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCATGCGCGGGGTGATCGCCTCGt > 1:8369819‑M2/14‑150 (MQ=255) tgggagcgggcTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCATGCGCGGGGTGATCGCCTCGTGc < 1:3269769‑M2/139‑1 (MQ=255) tgggagcgggcTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCATGCGCGGGGTGATCGCCTCGTGc > 2:306468‑M2/12‑150 (MQ=255) gggagcgggcTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCATGCGCGGGGTGATCGCCTCGTGCa > 1:6809245‑M2/11‑150 (MQ=255) gggagcgggcTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCATGCGCGGGGTGATCGCCTCGTGCa > 1:4099487‑M2/11‑150 (MQ=255) ttcgcgggcAAGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCATGCGCGGGGTGATCGCCTCGTGCAg > 2:1250682‑M2/10‑150 (MQ=255) ttcgcgggcAAGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCATGCGCGGGGTGATCGCCTCGTGCAg > 1:5213549‑M2/10‑150 (MQ=255) tacgcgggcAAGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCATGCGCGGGGTGATCGCCTCGTGCAg > 2:5972527‑M2/10‑150 (MQ=255) gagcgggcTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCATGCGCGGGGTGATc < 1:2437651‑M2/130‑1 (MQ=255) ggcTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCATGCGCGGGGTGATCGCCTCGTGCAGCTGCAc > 1:5819639‑M2/4‑150 (MQ=255) ttGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCATGCGCGGGGTGATCGCCTCGTGCAGCTGCaccga < 1:7406588/150‑1 (MQ=255) | TGCCTTTGTGAAGTCGACCGAAGTGTCTATCGCCAAGCTGTGATGCGGCGGGTCGATATTGGGGCTGCTTTGCAGCCCTTCGCCGGCACGCCCGCTCCCACAGGTACTCGCAAGCTCCAGGGTGCGCGCGGGCTCTGTGGGAGCGGGCTTGCCCGCGAAGGGCCGCCAAGCGGCCCCAGATTTCTCAGCTGGAACGCTTGGCCAGAAACGGCGGCAGATACAACCCCAGATACGCTTCGAACACCCGCTTGCCTTCCTCGGCCATGCGCGGGGTGATCGCCTCGTGCAGCTGCACCGA > NC_002947/295611‑295908 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |