Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,533,561 T→A 8.4% L129Q (CTG→CAG)  dnaEB → error‑prone DNA polymerase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,533,5610TA 8.4% 1163.5 / 69.9 369L129Q (CTG→CAG) dnaEBerror‑prone DNA polymerase
Reads supporting (aligned to +/- strand):  ref base T (210/125);  new base A (17/14);  total (227/142)
Fisher's exact test for biased strand distribution p-value = 4.41e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.15e-01

Only 100 of 380 total aligned reads displayed.

GTGCGACGGGCCCAAGCTGGTGCTGCTGGTCGAAAACCTGACGGGTTACCAGAACCTGTGCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGTGCGCCTGCAACGGTTGCGGGCACTGGCGGCTG  >  NC_002947/3533412‑3533710
                                                                                                                                                     |                                                                                                                                                     
        ggCCCAAGCTGGTGCTGCTGGTCGAAAACCTGACGGGTTACCAGAACCTGTGCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCGCCACCAAGGCCTGCTGGCCTtgt                                                                                                                                               <  1:4728331/150‑1 (MQ=255)
        ggCCCAAGCTGGTGCTGCTGGTCGAAAACCTGACGGGTTACCAGAACCTGTGCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCAGCAGGCCTtgg                                                                                                                                               <  2:2683949/150‑2 (MQ=255)
         gCCCAAGCTGGTGCTGCTGGTCGAAAACCTGACGGGTTACCAGAACCTGTGCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTtgtg                                                                                                                                              <  1:1885225/150‑1 (MQ=255)
          cccAAGCTGGTGCTGCTGGTCGAAAACCTGACGGGTTACCAGAACCTGTGCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCCACAAGGCCAGCAGGCCTtggtg                                                                                                                                             <  2:7601027/150‑4 (MQ=255)
          cccAAGCTGGTGCTGCTGGTCGAAAACCTGACGGGTTACCAGAACCTGTGCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTgtgg                                                                                                                                             <  2:7871594/150‑1 (MQ=255)
          cccAAGCTGGTGCTGCTGGTCGAAAACCTGACGGGTTACCAGAACCTGTGCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTgtgg                                                                                                                                             <  1:6279999/150‑1 (MQ=255)
           ccAAGCTGGTGCTGCTGGTCGAAAACCTGACGGGTTACCAGAACCTGTGCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACAAGGCCAGCAGGCCTtggtggt                                                                                                                                           <  1:2152035/150‑6 (MQ=255)
            cAAGCTGGTGCTGCTGGTCGAAAACCTGACGGGTTACCAGAACCTGTGCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTgtgggt                                                                                                                                           <  2:6888159/150‑1 (MQ=255)
             aaGCTGGTGCTGCTGGTCGAAAACCTGACGGGTTACCAGAACCTGTGCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCGTTgtgggtg                                                                                                                                          >  2:2044087/1‑150 (MQ=255)
                   gTGCTGCTGGTCGAAAACCTGACGGGTTACCAGAACCTGTGCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCt                                                                                                                                    <  1:1289118/150‑1 (MQ=255)
                   gTGCTGCTGGTCGAAAACCTGACGGGTTACCAGAACCTGTGCGCGCTGACCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCt                                                                                                                                    <  2:5213816/150‑1 (MQ=255)
                       tgctgGTCGAAAACCTGACGGGTTACCAGAACCTGTGCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACa                                                                                                                                <  1:8327006/150‑1 (MQ=255)
                         ctgGTCGAAAACCTGACGGGTTACCAGAACCTGTGCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGt                                                                                                                              >  2:3775870/1‑150 (MQ=255)
                          tgGTCGAAAACCTGACGGGTTACCAGAACCTGTGCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTg                                                                                                                             >  2:2447336/1‑150 (MQ=255)
                          tgGTCGAAAACCTGACGGGTTACCAGAACCTGTGCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTg                                                                                                                             >  2:1259170/1‑150 (MQ=255)
                          tgGTCGAAAACCTGACGGGTTACAAGAACCTGTGCGCGCTGATCACCCGTGCCAGGCGGCGGGCAGAGAAGGGGTCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAACGCCAGCTGGCCTGGTGGGTGGACGCAGACAGTg                                                                                                                             >  2:6390276/1‑150 (MQ=255)
                           ggTCGAAAACCTGACGGGTTACCAGAACCTGTGCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTgg                                                                                                                            <  2:5383926/150‑1 (MQ=255)
                           ggTCGAAAACCTGACGGGTTACCAGAACCTGTGCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTgg                                                                                                                            <  1:2751894/150‑1 (MQ=255)
                             tCGAAAACCTGACGGGTTACCAGAACCTGTGCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCg                                                                                                                          >  1:1932720/1‑150 (MQ=255)
                               gAAAACCTGACGGGTTACCAGAACCTGTGCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGAt                                                                                                                        >  1:6103764/1‑150 (MQ=255)
                               gAAAACCTGACGGGTTACCAGAACCTGTGCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGAt                                                                                                                        >  1:116489/1‑150 (MQ=255)
                               gAAAACCTGACGGGTTACCAGAACCTGTGCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGAt                                                                                                                        >  1:2822456/1‑150 (MQ=255)
                               gAAAACCTGACGGGTTACCAGAACCTGTGCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTGGTGGGTGGCCGCTGACAGTGGCGAt                                                                                                                        >  2:8585407/1‑150 (MQ=255)
                                 aaaCCTGACGGGTTACCAGAACCTGTGCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGACCGCTGACAGTGGCGATAc                                                                                                                      <  1:4532209/150‑1 (MQ=255)
                                  aaCCTGACGGGTTACCAGAACCTGTGCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACt                                                                                                                     <  2:3423078/150‑1 (MQ=255)
                                            gTTACCAGAACCTGTGCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGgcg                                                                                                           >  2:8376881/1‑150 (MQ=255)
                                             ttACCAGAACCTGTGCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGgcgc                                                                                                          >  2:8677829/1‑150 (MQ=255)
                                                ccAGAACCTGTGCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCgccaaggg                                                                                                       >  2:2571054/1‑143 (MQ=255)
                                                 cAGAACCTGTGCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTgg                                                                                                      >  2:7066048/1‑150 (MQ=255)
                                                 cAGAACCTGTGCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTgg                                                                                                      >  1:6244506/1‑150 (MQ=255)
                                                 cAGAACCTGTGCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGCCGCGTgg                                                                                                      >  2:8457915/1‑150 (MQ=255)
                                                  aGAACCTGTGCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGc                                                                                                     >  1:743624/1‑150 (MQ=255)
                                                        tgtgCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCa                                                                                               <  2:1152820/150‑1 (MQ=255)
                                                        tgtgCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCa                                                                                               <  1:8635358/150‑1 (MQ=255)
                                                          tgCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAgt                                                                                             <  2:7381922/150‑1 (MQ=255)
                                                          tgCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCGGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAgt                                                                                             <  2:905423/150‑1 (MQ=255)
                                                             gcgcTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAgtgtg                                                                                          >  1:508103/1‑150 (MQ=255)
                                                                 tGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCg                                                                                      <  2:1727172/150‑1 (MQ=255)
                                                                    tCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCCGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTg                                                                                   <  2:1570946/150‑1 (MQ=255)
                                                                     cACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGa                                                                                  <  2:623347/150‑1 (MQ=255)
                                                                     cACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGa                                                                                  <  2:8163993/150‑1 (MQ=255)
                                                                       tctctGCCCGCCGCCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAgc                                                                                >  2:4742444/5‑150 (MQ=255)
                                                                        ccGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAgcg                                                                               >  1:7877692/1‑150 (MQ=255)
                                                                        ccGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAgcg                                                                               >  2:3671016/1‑150 (MQ=255)
                                                                         tctGCCCGCCGCCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGGGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAgcgc                                                                              >  1:1585881/3‑150 (MQ=255)
                                                                             cccGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCtgt                                                                          >  1:3868039/1‑150 (MQ=255)
                                                                              ccGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCtgtg                                                                         >  1:6619898/1‑150 (MQ=255)
                                                                               cggcggcggGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGtgg                                                                        <  1:4273828/150‑1 (MQ=255)
                                                                                           gagaAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCAc                                                            >  2:3130679/1‑150 (MQ=255)
                                                                                             gaAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCt                                                          >  2:5879276/1‑150 (MQ=255)
                                                                                                gggggCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCa                                                       >  1:5931245/1‑150 (MQ=255)
                                                                                                    gCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCgg                                                   <  2:5469326/150‑1 (MQ=255)
                                                                                                    gCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCGTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCgg                                                   >  1:5843299/1‑150 (MQ=255)
                                                                                                     cGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCggg                                                  <  1:5656274/150‑1 (MQ=255)
                                                                                                     cGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCggg                                                  <  1:7237785/150‑1 (MQ=255)
                                                                                                        aCCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCa                                               >  1:4829643/1‑150 (MQ=255)
                                                                                                          cAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGt                                             >  1:7111410/1‑150 (MQ=255)
                                                                                                           aGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTg                                            >  1:3410273/1‑150 (MQ=255)
                                                                                                            gCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGa                                           <  2:718903/150‑1 (MQ=255)
                                                                                                            gCTGTTTCGTGATGACTCGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGa                                           >  1:4064647/1‑150 (MQ=255)
                                                                                                              tGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACg                                         >  1:7027784/1‑150 (MQ=255)
                                                                                                                     tgatgaCTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGt                                  >  1:5743903/1‑150 (MQ=255)
                                                                                                                     tgatgaCTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGt                                  >  2:3016979/1‑150 (MQ=255)
                                                                                                                     tgatgaCTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGt                                  >  1:1399126/1‑150 (MQ=255)
                                                                                                                     tgatgaCTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGt                                  >  2:6540241/1‑150 (MQ=255)
                                                                                                                     tgatgaCTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGt                                  >  1:2399422/1‑150 (MQ=255)
                                                                                                                     tgatgaCTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGt                                  >  1:7670385/1‑150 (MQ=255)
                                                                                                                       atgaCTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGTgc                                <  2:3954127/150‑1 (MQ=255)
                                                                                                                           cTTGCTGCTGCACCCCCCAGGCCTGCTGGCCGTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGGGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGTGCGCCt                            <  1:5990058/150‑1 (MQ=255)
                                                                                                                           cTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGTGCGCCt                            <  2:3037426/150‑1 (MQ=255)
                                                                                                                           cTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGTGCGCCt                            <  1:6173915/150‑1 (MQ=255)
                                                                                                                           cTTGCTGCTGCACCACCAAGGCCTGCTGGCCTGGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGTGCGCCt                            <  2:6957880/150‑1 (MQ=255)
                                                                                                                            ttGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGTGCGCCTg                           >  2:7267559/1‑150 (MQ=255)
                                                                                                                            ttGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGTGCGCCTg                           >  1:3484303/1‑150 (MQ=255)
                                                                                                                                tgctgcACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGTGCGCCTGCAAc                       >  1:8284174/1‑150 (MQ=255)
                                                                                                                                tgctgcACCACCAAGGCCTGCTGGCCTGGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGTGCGCCTGCacc                       >  2:3257231/1‑148 (MQ=255)
                                                                                                                                 gctgcACCACCAATGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGAGATACTGCTACCGGCGCGTGGCTTCGCAGTGTGTTCGCTGAGCGCCTGTGGCAGGCCGTACACCTGCATCGGGGCAGTGACGATGCCGTGCGCCTGCAACg                      >  1:1037389/1‑150 (MQ=255)
                                                                                                                                    gcACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCCGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCCTCGGGGCAGTGACGATGCCGTGCGCCTGCACCGGtt                   >  2:5706769/1‑150 (MQ=255)
                                                                                                                                    gcACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGTGCGCCTGCAACGGtt                   >  1:4910976/1‑150 (MQ=255)
                                                                                                                                     caccacCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGTGCGCCTGCAACGGTTg                  >  1:6455070/1‑150 (MQ=255)
                                                                                                                                      acccacaAGGCCAGCAGGCCTTGGTGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGTGCGCCTGCAACGGTTGc                 >  1:8062830/6‑150 (MQ=255)
                                                                                                                                      acccacaAGGCCAGCAGGCCTTGGTGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGTGCGCCTGCAACGGTTGc                 >  2:8513207/6‑150 (MQ=255)
                                                                                                                                        ccacaAGGCCAGCAGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGTGCGCCTGCAACGGTTGCgg               >  1:2506897/4‑150 (MQ=255)
                                                                                                                                        ccacaAGGCCAGCAGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGTGCGCCTGCAACGGTTGCgg               >  1:37632/4‑150 (MQ=255)
                                                                                                                                        ccacaAGGCCAGCAGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGTGCGCCTGCAACGGTTGCgg               >  2:606438/4‑150 (MQ=255)
                                                                                                                                        caccaAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGTGCGCCTGCAACGGTTGCgg               <  2:8278835/150‑1 (MQ=255)
                                                                                                                                         accaAGGCCTGCTGGTCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGTGCGCCTGCAACGGTTGCggg              >  2:6151152/1‑150 (MQ=255)
                                                                                                                                          ccaAGGCCTGCTGGCCTTGGTGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGTGCGCCTGCAACGGTTGCGGGc             >  1:403696/1‑150 (MQ=255)
                                                                                                                                           caAGGCCTTCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGTGCGCCTGCAACGGTTGCGGGCa            >  1:2956951/1‑150 (MQ=255)
                                                                                                                                           caAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTCCCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGTGCGCCTGCAACGGTTGCGGGCa            >  1:882374/1‑150 (MQ=255)
                                                                                                                                           caAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGTGCGCCTGCAACGGTTGCGGGCa            >  2:482667/1‑150 (MQ=255)
                                                                                                                                            aaGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGTGCGCCTGCAACGGTTGCGGGCAc           >  1:5476149/1‑150 (MQ=255)
                                                                                                                                            aaGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGTGCGCCTGCAACGGTTGCGGGCAc           >  1:2635269/1‑150 (MQ=255)
                                                                                                                                            aaGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGTGCGCCTGCAACGGTTGCGGGCAc           >  2:4447774/1‑150 (MQ=255)
                                                                                                                                               gCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGTGTGCCCGCAACCGTTGCAGGcgcacg        <  2:2731834/150‑6 (MQ=255)
                                                                                                                                               gCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGTGCGCCTGCAACGGTTGCGGGCACTgg        >  2:5108501/1‑150 (MQ=255)
                                                                                                                                                  tgctgGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGTGCGCCTGCAACGGTTGCGGGCACTggcgg     <  1:3162077/150‑1 (MQ=255)
                                                                                                                                                  tgctgGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGTGCGCCTGCAACGGTTGCGGGCACTggcgg     >  1:6979481/1‑150 (MQ=255)
                                                                                                                                                   gctgGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGTGCGCCTGCAACGGTTGCGGGCACTggcggc    >  1:6753633/1‑150 (MQ=255)
                                                                                                                                                   gctgGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGTGCGCCTGCAACGGTTGCGGGCACTggcggc    <  1:3655742/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GTGCGACGGGCCCAAGCTGGTGCTGCTGGTCGAAAACCTGACGGGTTACCAGAACCTGTGCGCGCTGATCACCCGTGCCCGGCGGCGGGCAGAGAAGGGGGCGTACCAGCTGTTTCGTGATGACTTGCTGCTGCACCACCAAGGCCTGCTGGCCTTGTGGGTGGCCGCTGACAGTGGCGATACTGCTACCGGCGCGTGGCTGCGCAGTGTGTTCGCTGAGCGCCTGTGGCTGGCCGTGCACCTGCATCGGGGCAGTGACGATGCCGTGCGCCTGCAACGGTTGCGGGCACTGGCGGCTG  >  NC_002947/3533412‑3533710

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: