| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,541,800 | A→T | 5.6% | D149V (GAC→GTC) | PP_3125 → | Cro/CI family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,541,800 | 0 | A | T | 5.6% | 1158.3 / 37.0 | 339 | D149V (GAC→GTC) | PP_3125 | Cro/CI family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (169/151); new base T (8/11); total (177/162) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.79e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
Only 100 of 343 total aligned reads displayed.
GCGCAGCCTGCTGCCGTTTCTGATTCAGCCGCCGTCCGAGTTCAGCGACCCTACGTTCAAGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAGCGCAAGGGGGCAACTATGCCCCCCACACGTTCTCAGGCGTGAAACGCCA > NC_002947/3541651‑3541949 | gcgcAGCCTGCTGCCGTTTCTGATTCAGCCGCCGTCCGAGTTCAGCGACCCTACGTTCAAGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGa < 2:8744784/150‑1 (MQ=255) aGCCTGCTGCCGTTTCTGATTCAGCCGCCGTCCGAGTTCAGCGACCCTACGTTCAAGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGTCGcc < 1:29166/150‑1 (MQ=255) ccTGCTGCCGTTTCTGATTCAGCCGCCGTCCGAGTTCAGCGACCCTACGTTCAAGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCt > 2:6713137/1‑150 (MQ=255) ccTGCTGCCGTTTCTGATTCAGCCGCCGTCCGAGTTCAGCGACCCTACGTTCAAGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCt > 2:3608618/1‑150 (MQ=255) ctgctgCCGTTTCTGATTCAGCCGCCGTCCGAGTTCAGCGACCCTACGTTCAAGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGTCGCCCTg < 1:2987185/150‑1 (MQ=255) ctgctgCCGTTTCTGATTCAGCCGCCGTCCGAGTTCAGCGACCCTACGTTCAAGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGTCGCCCTg < 1:243515/150‑1 (MQ=255) tgcCGTTTCTGATTCAGCCGCCGTCCGAGTTCAGCGACCCTACGTTCAAGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGTCGCCCTGctcc < 2:726627/150‑4 (MQ=255) tgcCGTTTCTGATTCAGCCGCCGTCCGAGTTCAGCGACCCTACGTTCAAGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCAtt < 1:1073811/150‑1 (MQ=255) gcCGTTTCTGATTCAGCCGCCGTCCGAGTACAGCGACCCTACGTTCAAGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGTCGCCCTGctcca < 2:2502551/150‑5 (MQ=255) ccGTTTCTGATTCAGCCGCCGTCCGAGTTCAGCGACCCTACGTTCAAGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTc < 1:6534208/150‑1 (MQ=255) ccGTTTCTGATTCAGCCGCCGTCCGAGTTCAGCGACCCTACGTTCAAGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTc < 1:5827028/150‑1 (MQ=255) cGTTTCTGATTCAGCCGCCGTCCGAGTTCAGCGACCCTACGTTCAAGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCa < 1:3429571/150‑1 (MQ=255) gTTTCTGATTCAGCCGCCGTCCGAGTTCAGCGACCCTACGTTCAAGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCaa < 1:4236025/150‑1 (MQ=255) tttCTGATTCAGCCGCCGTCCGAGTTCAGCGACCCTACGTTCAAGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAAc < 2:6518084/150‑1 (MQ=255) tttCTGATTCAGCCGCCGTCCGAGTTCAGCGACCCTACGTTCAAGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAAc > 2:8522331/1‑150 (MQ=255) tCTGATTCAGCCGCCGTCCGAGTTCAGCGACCCTACGTTCAAGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGc > 1:856293/1‑150 (MQ=255) tCTGATTCAGCCGCCGTCCGAGTTCAGCGACCCTACGTTCAAGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGc > 2:3540224/1‑150 (MQ=255) cTGATTCAGCCGCCGTCCGAGTTCAGCGACCCTACGTTCAAGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGcc > 1:2621999/1‑150 (MQ=255) tGATTCAGCCGCCGTCCGAGTTCAGCGACCCTACGTTCAAGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGccc > 1:3777703/1‑150 (MQ=255) tGATTCAGCCGCCGTCCGAGTTCAGCGACCCTACGTTCAAGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGccc > 1:3179288/1‑150 (MQ=255) gccgccGTCCGAGTTCAGCGACCCTACGTTCAAGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGAcacc < 1:7329012/150‑1 (MQ=255) gccgccGTCCGAGTTCAGCGACCCTACGTTCAAGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGAcacc > 1:6683820/1‑150 (MQ=255) gccgccGTCCGAGTTCAGCGACCCTACGTTCAAGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGAcacc > 2:4239565/1‑150 (MQ=255) ttCAGCGACCCTACGTTCAAGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTgcgc > 1:1754608/1‑150 (MQ=255) tCAGCGACCCTACGTTCAAGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCt > 2:7773196/1‑150 (MQ=255) cAGCGACCCTACGTTCAAGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTc < 2:5615390/150‑1 (MQ=255) aGCGACCCTACGTTCAAGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCg > 1:6800084/1‑150 (MQ=255) cGACCCTACGTTCAAGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGt < 2:6772978/150‑1 (MQ=255) ccTACGTTCAAGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGgt > 1:3255349/1‑150 (MQ=255) ccTACGTTCAAGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGgt < 2:4592274/150‑1 (MQ=255) ccTACGTTCAAGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGgt < 2:6063786/150‑1 (MQ=255) tACGTTCAAGGAACACCAGGGCGAAGAGGTCCTGTTTGTTCACACAGGCCAGGTGGACGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGgtgt < 2:3027735/150‑1 (MQ=255) tCAAGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGc > 1:5999265/1‑150 (MQ=255) aaGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCg > 2:8002853/1‑150 (MQ=255) aaGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGAAGCCg > 1:2801096/1‑150 (MQ=255) aGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCgg < 1:3033538/150‑1 (MQ=255) aGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCgg > 2:2031963/1‑150 (MQ=255) ggAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGgc > 1:7365605/1‑150 (MQ=255) ggAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTAGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGgc > 2:1496211/1‑150 (MQ=255) cacCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAg < 2:7795453/150‑1 (MQ=255) acCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGt > 2:2198692/1‑150 (MQ=255) ggCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTg < 2:2805665/150‑1 (MQ=255) ggCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTg < 1:1533943/150‑1 (MQ=255) aaGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGgttg < 2:1977462/150‑1 (MQ=255) gagTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGgttgtt < 2:7095350/150‑1 (MQ=255) gagTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGgttgtt > 1:5028515/1‑150 (MQ=255) agTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGgttgttg < 1:1931490/150‑1 (MQ=255) agTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGgttgttg < 1:3481596/150‑1 (MQ=255) ttCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGgttgttgtt < 1:5644556/150‑1 (MQ=255) ttCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGgttgttgtt < 1:8356119/150‑1 (MQ=255) tCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTc < 2:5700105/150‑1 (MQ=255) cTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTcac > 2:694665/1‑150 (MQ=255) cTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTcac > 2:6343733/1‑150 (MQ=255) cTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTcac > 1:2949526/1‑150 (MQ=255) cTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTcac < 1:6474938/150‑1 (MQ=255) tgtttgttCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTcacc > 2:7572300/1‑150 (MQ=255) gtttgttCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTcacca < 1:1674815/150‑1 (MQ=255) tgttCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGc < 1:5115061/150‑1 (MQ=255) tCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGa < 2:8441876/150‑1 (MQ=255) cacacaGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGAc < 1:3884528/150‑1 (MQ=255) cacacaGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGAc > 1:4479264/1‑150 (MQ=255) caGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAAt < 1:4966062/150‑1 (MQ=255) caGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAAt < 2:7474063/150‑1 (MQ=255) ggCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGa > 2:3210715/1‑150 (MQ=255) ggTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCAACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAgcg > 1:6889297/1‑150 (MQ=255) gTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAgcgc > 2:582185/1‑150 (MQ=255) tGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAGCGCa < 1:7773196/150‑1 (MQ=255) ggAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAGCGCaa > 1:8141203/1‑150 (MQ=255) ggAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAGCGCaa > 1:4931243/1‑150 (MQ=255) ggAAGAGCATATCATGAGTGAGCGTGTGTATCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGCTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAGCGCaa > 2:2335632/1‑150 (MQ=255) gAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAGCGCAAg > 1:6267861/1‑150 (MQ=255) aaGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAGCGCAAgg < 1:2407539/150‑1 (MQ=255) aGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAGCGCAAggg < 1:7007399/150‑1 (MQ=255) gTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAGCGCAAgggg > 1:8269929/1‑150 (MQ=255) tttCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAGCGCAAGGGGGCAAc > 2:3797046/1‑150 (MQ=255) tCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAGCGCAAGGGGGCAACTa > 1:1003430/1‑150 (MQ=255) cATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAGCGCAAGGGGGCAACTAt > 1:5465530/1‑150 (MQ=255) cATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAGCGCAAGGGGGCAACTAt < 2:8383630/150‑1 (MQ=255) cATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCACACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAGCGCAAGGGGGCAACTAt > 1:8432871/1‑150 (MQ=255) aTGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAGCGCAAGGGGGCAACTATg > 2:5117418/1‑150 (MQ=255) aTGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAGCGCAAGGGGGCAACTATg > 1:536054/1‑150 (MQ=255) aTGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAGCGCAAGGGGGCAACTATg > 1:7927611/1‑150 (MQ=255) tgagCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAGCGCAAGGGGGCAACTATGccccc > 2:106792/1‑150 (MQ=255) tgagCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAGCGCAAGGGGGCAACTATGccccc < 1:272263/150‑1 (MQ=255) gCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAGCGCAAGGGGGCAACTATGCCCCCcac > 1:2306777/1‑150 (MQ=255) cGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAGCGCAAGGGGGCAACTATGCCCCCcaca > 2:8176660/1‑150 (MQ=255) cGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAGCGCAAGGGGGCAACTATGCCCCCcaca > 2:4499946/1‑150 (MQ=255) gggTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAGCGCAAGGGGGCAACTATGCCCCCCacac < 1:7571335/150‑1 (MQ=255) ggTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAGCGCAAGGGGGCAACTATGCCCCCCACACg > 2:1316892/1‑150 (MQ=255) gtTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAGCGCAAGGGGGCAACTATGCCCCCCACACGTtc > 2:5361459/1‑150 (MQ=255) gCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTgg < 2:3895553/86‑1 (MQ=255) gCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCGCCACGCAGACGAATGAAAGCGCAAGGGGGCAACTATGCCCCCCACACGTTCTCa > 1:6131036/1‑150 (MQ=255) gaaatgCAGGGCGTCGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAGCGCAAGGGGGCAACTATGCCCCCCACACGTTCTCAg > 1:1257688/6‑150 (MQ=255) tGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAGCGCAAGGGGGCAACTATGCCCCCCACACGTTCTCAgg > 2:4959318/1‑150 (MQ=255) tGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAGCGCAAGGGGGCAACTATGCCCCCCACACGTTCTCAgg > 2:6627977/1‑150 (MQ=255) atgCAGGGCGTCGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAGCGCAAGGGGGCAACTATGCCCCCCACACGTTCTCAGGCg > 2:6173965/3‑150 (MQ=255) tgCAGGGCGTCGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAGCGCAAGGGGGCAACTATGCCCCCCACACGTTCTCAGGCGt > 1:5741215/2‑150 (MQ=255) cAGGGCGACGCCCTGCATTTCAACGCCCATACACCGCACCGTCTGCGCTCGGTATGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAGCGCAAGGGGGCAACTATGCCCCCCACACGTTCTCAGGCGTGa < 1:394158/150‑1 (MQ=255) ggCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAGCGCAAGGGGGCAACTATGCCCCCCACACGTTCTCAGGCGTGAAAc < 2:1136070/150‑1 (MQ=255) ggCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAGCGCAAGGGGGCAACTATGCCCCCCACACGTTCTCAGGCGTGAAAc > 2:409513/1‑150 (MQ=255) | GCGCAGCCTGCTGCCGTTTCTGATTCAGCCGCCGTCCGAGTTCAGCGACCCTACGTTCAAGGAACACCAGGGCGAAGAGTTCCTGTTTGTTCACACAGGCCAGGTGGAAGTGGATTTCATGAGTGAGCGGGTGTTGCTGGAGCAGGGCGACGCCCTGCATTTCAACGCCCAGACACCGCACCGGCTGCGCTCGGTAGGTGTGACGCCGGCGCAGTTACTGGTTGTTGTTCACCACGCAGACGAATGAAAGCGCAAGGGGGCAACTATGCCCCCCACACGTTCTCAGGCGTGAAACGCCA > NC_002947/3541651‑3541949 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |