| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,620,448 | A→G | 6.8% | intergenic (+19/‑210) | PP_3186 → / → codB | transcriptional regulator/cytosine transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,620,448 | 0 | A | G | 6.8% | 641.2 / 8.8 | 230 | intergenic (+19/‑210) | PP_3186/codB | transcriptional regulator/cytosine transporter |
| Reads supporting (aligned to +/- strand): ref base A (77/129); new base G (12/3); total (98/132) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.79e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 235 total aligned reads displayed.
GCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATTTCTTCCGGGTGGCGGCGCAG > NC_002947/3620299‑3620597 | gcAAGCACCTGGCTGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGa < 1:2418083/150‑1 (MQ=255)gcAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGa > 1:4504093/1‑150 (MQ=255) aGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATta < 1:6019367/150‑1 (MQ=255) aCCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATtacta < 1:8155363/150‑1 (MQ=255) aCCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATtacta < 1:5647055/150‑1 (MQ=255) cTGGATGAACTGGTCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTAcc < 2:5847054/150‑1 (MQ=255) cTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTAcc > 2:4515213/1‑150 (MQ=255) gATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTAcccag > 2:3408362/1‑150 (MQ=255) tGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTAGTAATCAcccagcc < 2:1970083/150‑1 (MQ=255) aaCTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTAcccagccca < 2:4976013/150‑1 (MQ=255) aCTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGCACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTAcccagcccag < 2:6772007/150‑1 (MQ=255) tGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGa < 1:7299917/150‑1 (MQ=255) tGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGa < 2:5121421/150‑1 (MQ=255) ggCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGAc < 1:4876091/150‑1 (MQ=255) gCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGGTTAATACCCAGCCCAGGAcc > 2:1123981/1‑150 (MQ=255) gCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGACAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGGGATTAATACCCCGCCCAGGAcc > 2:3118328/1‑150 (MQ=255) cgcgcgCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTAACCAGCCCACGACCGc > 2:5618848/1‑150 (MQ=255) gcgcAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCttt < 2:1400306/150‑1 (MQ=255) cgcAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGTTTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTg < 1:3521222/150‑1 (MQ=255) gcagcaTGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCGGGGGGGTTACTACCCACCCCACGACCCCCTTgg > 1:7480309/1‑150 (MQ=255) cagcaTGACCGAGCAGCGGTTCGCCGCCCGGGCCGGGATTTTGGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGt < 2:2260469/150‑1 (MQ=255) cagcaTGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGt < 2:5164997/150‑1 (MQ=255) caTGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACAAACCACCCCACGACCGCTTTGGTGCa > 2:3043712/1‑150 (MQ=255) ccGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGGTTACTAACCAGCCCCCGACCCCGTTGGTGCATgggg > 1:5209127/1‑149 (MQ=255) gAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGgcgc < 2:2356255/150‑1 (MQ=255) agcagcGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGcc < 2:2383043/150‑1 (MQ=255) agcagcGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGcc < 1:4797061/150‑1 (MQ=255) cagcGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTc < 2:5936203/150‑1 (MQ=255) cagcGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTc < 2:1511041/150‑1 (MQ=255) cagcGGGTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTc < 2:4417130/150‑1 (MQ=255) cGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCGGGGTGATTACTACCCCCCCCAGGACCGCTTTGGTGCATGGGCGCCGCaaa > 2:4075754/1‑150 (MQ=255) ggTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCaaaa < 2:5240239/150‑1 (MQ=255) tCGCCTAACTGGCTGGTATTTTTGGCCTGGCCTCCAGCCTGGAGGCGTTTTTCTGGAAAATGGGGTTGGACGGGACGGTGTAAACCGCGGTGGGCTGGGTTATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATaa < 1:3676185/150‑1 (MQ=255) tCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATaa < 2:7468612/150‑1 (MQ=255) tCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATaa < 2:7756452/150‑1 (MQ=255) tCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATaa < 2:3574173/150‑1 (MQ=255) tCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATaa < 2:4882736/150‑1 (MQ=255) tCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATaa < 1:4578556/150‑1 (MQ=255) cGCCGAACTGGCTGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAg < 1:7628467/150‑1 (MQ=255) gCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGAGGGCTGGGGGATTACAAACCCCCCCAAGACCCCCGTGGTGCCTGGGCGCCTCCaaaaaaat > 1:5216344/1‑148 (MQ=255) gAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCAGGGTGATTACTAACCAGCCCAGGACCCCTTTGGTGCATGGGCGCCACAAAAAAActcgt > 2:4605080/1‑150 (MQ=255) aCTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTcc < 2:8163817/150‑1 (MQ=255) cTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTccc < 2:2716702/150‑1 (MQ=255) ggCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGc < 2:609396/150‑1 (MQ=255) ggCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCAGGGTGATTACTAACCCGCCCAGGACCCCGTTGGTGCGTGGGCGCCGCCCAATAAGTCGTACCGc > 2:7589828/1‑150 (MQ=255) gCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTAATACCCACCCCAGGACCCCGTTGGTGCAATGGCGCCTCAAAATAAGTCGGCCCGca > 2:1869605/1‑150 (MQ=255) aGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGGTTACAAACCACCCCCCGACCCCGTTGGTGCATGGGCGCCGCAAAAAAAATCGACCCCcaca > 2:3191904/1‑150 (MQ=255) aGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACGACCCACCCCCCGACCGCGTTGGTGCATGGGCGCCGCAAAATAAGTCGTccccccca > 1:8727866/1‑145 (MQ=255) aGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAAAGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCGGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCACAAAAAGAGAAGTCCCCcaca > 2:1269460/1‑150 (MQ=255) ttttGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCATTGGCGCATGGGCGCCGCAAAATAAGTCGTCCCGCACACTCCAg > 2:4939578/1‑150 (MQ=255) ttGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGAt < 1:6262049/150‑1 (MQ=255) gCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGt < 1:5845954/150‑1 (MQ=255) gCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGt < 1:8222986/150‑1 (MQ=255) gCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCGGGGTGTTTACTAACCACCCCACGACCCCTTTTGTGCATTGGCGCCCCAAAAAAATTAGTCCCGCACACACCAGAtagg > 2:2367168/1‑147 (MQ=255) ccAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGGGGGGGGTTTAAAACCCACCCCAGGACCGCATTTGTTCAATGGCGCCGCAAAAAAATTAGTCCCCCACACACCacaaagta > 1:1372218/1‑143 (MQ=255) ccAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTc < 1:5044790/150‑1 (MQ=255) ccAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCAAGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTc > 2:7958333/1‑150 (MQ=255) cAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTAATACCCAGCCCAGGACCGCGTTGGTGCATGGGCGCCGCAAAATAAGTAGTCCCGCACCCACCCGATCGTCa > 2:2319741/1‑150 (MQ=255) aGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCATGGTGATTACTAACCAGCCCAGGACCGCGTTGGTGCATGGGCGCCGCAAAATAAATAGTCCCGCACACACCAGATCGTCAg > 1:6584068/1‑150 (MQ=255) gCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGACAGAt < 2:3685973/150‑1 (MQ=255) gCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCGGGGGGGTTAGTACCCACCCCCCGACCGCGGTGGTGCATTGGCGCCGCCAAAAAAGTCGTCCCCCCCACACCCGGTCggcccat > 1:5541496/1‑144 (MQ=255) tCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGc > 2:7292391/1‑150 (MQ=255) cAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTTATTAATAAACAGCCCAGGACCGCATTTGTGCATGGGCGCCGCAAAATAAGTAGTCCCCCACACACCACAAAGTCAGATCGCAg > 2:1799462/1‑150 (MQ=255) aggCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACAACCCAGCCCACGACCCCGTTGGTGCATGGGCCCCTCAAAATAAATCGTACCCCACACAACAGATCGTCACATAGCAg > 2:5524922/3‑150 (MQ=255) aGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGc > 2:8693721/1‑150 (MQ=255) ccTGGCGGCGGATTTCTGGCAAATGGGGTTGGACGGGCCCGGGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCtt < 1:1205395/150‑1 (MQ=255) gAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAAt < 1:7961852/150‑1 (MQ=255) gAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACAAACCACCCCACGCCCCCATTGGGGCAATGGCGCCCCAAAAAAACTAGTCCCGCACACACCACAAAGTCAGATAGCAGCATTAAt > 2:2574565/1‑150 (MQ=255) aGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAAtg > 2:8714944/1‑150 (MQ=255) ggCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAAtgt < 2:7369869/150‑1 (MQ=255) ggATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGTTTTCTACCCAGCCCAGGACCCCATTTGTGCATGGGCGCCTCAAAATAAGTCGTCCCCCACCAACCAGATCCTCAGATAGGAGCGTTAAtgttga > 1:7193231/1‑147 (MQ=255) ggATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGGGATTACTAACCAGCCCAGGACCGCTTTGGTGCATGGGCGCCGCAAAATAAGTCGTCCCGCACACTCCAGAACGTCAGATCGCAGCTTTAATGTGca > 2:3550985/1‑150 (MQ=255) gATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGTTTAATACCCAGCCCACGAACCCGTTTGTGCATGGGGGCCACAAAAAAAATCGTACCCCACACACCACATAGTCAGATCGCAGCGTTAATGTGaac > 2:2553149/1‑150 (MQ=255) cTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGc < 2:7480309/150‑1 (MQ=255) gTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCt < 1:3408362/150‑1 (MQ=255) ttGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTg < 1:3159067/150‑1 (MQ=255) tGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTgg < 2:7699359/150‑1 (MQ=255) ggACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTggg < 1:5677195/150‑1 (MQ=255) ggACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACAACCCAGCCCAGGACCGCTTTGGTTCCTGGGCGCCTCAAAATAAGTCGTCCCGCACACACCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTggg > 2:5794908/1‑150 (MQ=255) aCGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAATTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCATTAATGTGCACAGTGCATATGGCTTTCTGGGCg > 2:8049951/1‑150 (MQ=255) aCGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACAAACCACCCCCGGACCGCGTTGGTGCATGGGCGCCGCCAAATAACGCGTCCCCCACACGCCACAAAGTCACGTAGCAGCGTTAATGTGCACCGTGCAAATGGATTTAAGGGCg > 2:6626111/1‑150 (MQ=255) ggACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGTCCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAAc < 1:3194506/150‑1 (MQ=255) gACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACa < 2:6055450/150‑1 (MQ=255) gACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCATTGGTGCATGGGCGCCTCAAAAAAAGTCGTCCCCCACACAACAGATCCTCCGATCGCAGCTTTAATTTGCACAGTGCATATGGATTTCTGGGCGAACa > 2:6501524/1‑150 (MQ=255) ccGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGc < 2:5541496/150‑1 (MQ=255) tAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCACGACCGCGTTGGTGCAGGGGCGCCGCAAAATAACTCGTCCCGCACCCACCCGATCGTCAGATCGCAGCTGTAAGGTGCACACTGCAGATGGCGGTCTGGGCGACCAGCCCGag > 2:7109006/1‑149 (MQ=255) aaaCCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGAtt < 2:3303344/150‑1 (MQ=255) aaCCGCCGTGGGCTGGGTGATTACTACCTAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGAttt > 1:1520101/1‑150 (MQ=255) aaCCGCCGTGGGCTGGGGGATTTCTACCCACCCCACCCCCGCGTTTGTGCATTGGGGCCGCAAAATAAGTAGTCCCCCACACACCACATCGGCAGATCGCAGCTTTAATGTGGACAGGGCATATTGATTTGTGGGCGAAAAGCCCgcggt > 2:2225186/1‑146 (MQ=255) cgTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATTTCTTCCg < 2:376485/150‑1 (MQ=255) cgTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATTTCTTCCg < 1:1126110/150‑1 (MQ=255) gTGGGCTGGTTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATTTCTTCCgg < 1:2823796/150‑1 (MQ=255) gTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATTTCTTCCgg < 1:1846750/150‑1 (MQ=255) ggCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATTTCTTCCGGGTg > 2:3501333/1‑150 (MQ=255) tGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATTTCTTCCGGGTggcg > 1:1076982/1‑150 (MQ=255) tGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATTTCTTCCGGGTggcg > 1:2741110/1‑150 (MQ=255) tGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATTTCTTCCGGGTggcg > 1:7451630/1‑150 (MQ=255) ggTGATTGCTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATGTCTGGGCGAACAGCCCGATTTCTTCCGGGTggcggc > 2:8187161/1‑150 (MQ=255) tGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATTTCTTCCGGGTGGCGgcgc > 1:3020509/1‑150 (MQ=255) aTTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATTTCTTCCGGGTGGCGGCGCAg > 1:418793/1‑150 (MQ=255) | GCAAGCACCTGGATGAACTGGCCGCGCGCAGCATGACCGAGCAGCGGTTCGCCGAACTGGCAGGGATTTTTGGCCAGGCCTCCAGCCTGGAGGCGGATTTCTGGCAAATGGGGTTGGACGGGACCGTGTAAACCGCCGTGGGCTGGGTGATTACTACCCAGCCCAGGACCGCTTTGGTGCATGGGCGCCTCAAAATAAGTCGTCCCGCACACTCCAGATCGTCAGATCGCAGCTTTAATGTGCACAGTGCATATGGATTTCTGGGCGAACAGCCCGATTTCTTCCGGGTGGCGGCGCAG > NC_002947/3620299‑3620597 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |