BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	3,642,733	G→T	5.2%	E107D (GAG→GAT)	PP_3204 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	3,642,733	0	G	T	5.2%	1443.0 / 46.8	423	E107D (GAG→GAT)	PP_3204	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (178/223); new base T (8/14); total (186/237)
Fisher's exact test for biased strand distribution p-value = 5.15e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.28e-01

Only 100 of 432 total aligned reads displayed.

CGACCCTGGACAACGGCGATGATCCGACAGCGCAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATGGCGAAGTCCACCTCAAACGAGGCGACAT  >  NC_002947/3642585‑3642882

cGACCCTGGACAACGGCGATGATCCGACAGCGCAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCgaga                                                                                                                                                      <  2:5752547/150‑1 (MQ=255)

    ccTGGACAACGGCGATGATCCGACAGCGCAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCgg                                                                                                                                                  >  1:7007862/1‑150 (MQ=255)

     cTGGACAACGGCGATGATCCGACAGCGCAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCggc                                                                                                                                                 <  2:4447951/150‑1 (MQ=255)

       ggACAACGGCGATGATCCGACAGCGCAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCggcga                                                                                                                                               <  2:8088687/150‑1 (MQ=255)

       ggACAACGGCGATGATCCGACAGCGCAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCggcga                                                                                                                                               <  2:1696457/150‑1 (MQ=255)

       ggACAACGGCGATGATCCGACAGCGCAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCggcga                                                                                                                                               <  2:2027395/150‑1 (MQ=255)

       ggACAACGGCGATGATCCGACAGCGCAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCggcga                                                                                                                                               <  1:6116733/150‑1 (MQ=255)

        gACAACGGCGATGATCCGACAGCGCAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGATCTCggcgaa                                                                                                                                              <  2:2518265/150‑2 (MQ=255)

            aCGGCGATGATCCGACAGCGCAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGATCTCggcgaagaca                                                                                                                                          <  2:5439537/150‑6 (MQ=255)

            aCGGAGATGATCCGACAGCGCAGCCGCTGCTTTTGAGCCCTGGCCCGCTGGGCAGCGTGATGCGCGTGGTGGACATACAGCCCGACAGCGTGCAGATCCAGGTCAGTGCCGCAGATGGAGCCGGTTTCTTCGCCGAGATCggcgaggcga                                                                                                                                          <  2:3469789/150‑1 (MQ=255)

              ggCGATGATCCGACAGCGCAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGt                                                                                                                                        >  2:1410482/1‑150 (MQ=255)

              ggCGATGATCCGACAGCGCAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGt                                                                                                                                        >  2:7436460/1‑150 (MQ=255)

              ggCGATGATCCGACAGCGCAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGt                                                                                                                                        <  1:5713007/150‑1 (MQ=255)

               gCGATGATCCGACAGCGCAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTg                                                                                                                                       >  2:5002869/1‑150 (MQ=255)

                  atgatCCGACAGCGCAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCg                                                                                                                                    <  1:864983/150‑1 (MQ=255)

                  atgatCCAACAGCGCAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCg                                                                                                                                    <  2:6371094/150‑1 (MQ=255)

                      tCCGACAGCGCAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCAc                                                                                                                                >  1:3479381/1‑150 (MQ=255)

                       ccGACAGCGCAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACg                                                                                                                               <  2:1991822/150‑1 (MQ=255)

                        cGACAGCGCAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACgg                                                                                                                              <  2:3798844/150‑1 (MQ=255)

                        cGACAGCGCAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACgg                                                                                                                              <  2:5334461/150‑1 (MQ=255)

                             gcgcAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCaaa                                                                                                                         <  2:8680808/150‑1 (MQ=255)

                             gcgcAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCaaa                                                                                                                         <  1:477725/150‑1 (MQ=255)

                               gcAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGc                                                                                                                       >  1:1059803/1‑150 (MQ=255)

                                cAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGcc                                                                                                                      >  2:702673/1‑150 (MQ=255)

                                    cGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGAtt                                                                                                                  <  2:6448015/150‑1 (MQ=255)

                                     gCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTc                                                                                                                 >  2:1265889/1‑150 (MQ=255)

                                        gCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGaa                                                                                                              <  1:5189041/150‑1 (MQ=255)

                                        gCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGaa                                                                                                              <  2:352552/150‑1 (MQ=255)

                                         cAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAg                                                                                                             >  1:3778820/1‑150 (MQ=255)

                                          aaTTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGc                                                                                                            >  1:5832440/1‑150 (MQ=255)

                                              gAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACaa                                                                                                        <  2:5832440/150‑1 (MQ=255)

                                                 cccTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCt                                                                                                     >  1:7703869/1‑150 (MQ=255)

                                                    tGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATACGAAGCACACGCTGAt                                                                                                  >  1:4837922/1‑150 (MQ=255)

                                                       cccGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATgca                                                                                               <  2:8151079/150‑1 (MQ=255)

                                                                cAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGa                                                                                      >  2:5231255/1‑150 (MQ=255)

                                                                   cGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAAc                                                                                   >  1:854199/1‑150 (MQ=255)

                                                                   cGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAAc                                                                                   >  1:4124066/1‑150 (MQ=255)

                                                                   cGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAAc                                                                                   >  1:802845/1‑150 (MQ=255)

                                                                     tGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAAccc                                                                                 <  1:4460400/150‑1 (MQ=255)

                                                                       aTTCGCGTGGTGGACATACCGCCCGACTGCGTGCAGAACCTGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGGACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTg                                                                               <  1:8398588/150‑1 (MQ=255)

                                                                        ttCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTgg                                                                              <  2:6041044/150‑1 (MQ=255)

                                                                        ttCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTgg                                                                              >  2:6722571/1‑150 (MQ=255)

                                                                         tCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGa                                                                             <  1:973617/150‑1 (MQ=255)

                                                                         tCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGa                                                                             <  2:5495407/150‑1 (MQ=255)

                                                                           gcgTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACt                                                                           >  1:6449410/1‑150 (MQ=255)

                                                                                  ggACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCAt                                                                    <  1:7466276/150‑1 (MQ=255)

                                                                                   gACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATc                                                                   <  2:6275802/150‑1 (MQ=255)

                                                                                   gACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATc                                                                   <  2:2923654/150‑1 (MQ=255)

                                                                                      aTACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGtt                                                                >  1:1137293/1‑150 (MQ=255)

                                                                                        aCCGCCCGACAGCGTGCAGAACCAAGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTAc                                                              <  1:5955607/150‑1 (MQ=255)

                                                                                         ccGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTAcc                                                             >  2:8447973/1‑150 (MQ=255)

                                                                                          cGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCg                                                            >  1:7830023/1‑150 (MQ=255)

                                                                                          cGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCg                                                            >  2:224232/1‑150 (MQ=255)

                                                                                            cccGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCGTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAg                                                          <  2:4111346/150‑1 (MQ=255)

                                                                                             ccGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAgg                                                         <  2:4596415/150‑1 (MQ=255)

                                                                                                aCAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCg                                                      >  1:5533479/1‑150 (MQ=255)

                                                                                                 cAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGa                                                     <  1:7178142/150‑1 (MQ=255)

                                                                                                  aGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAg                                                    <  1:419925/150‑1 (MQ=255)

                                                                                                  aGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAg                                                    <  2:8550119/150‑1 (MQ=255)

                                                                                                       gCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTctg                                               >  2:6107288/1‑150 (MQ=255)

                                                                                                        cAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAgg                                                         >  1:4045266/1‑139 (MQ=255)

                                                                                                        cAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTctgg                                              <  1:5002869/150‑1 (MQ=255)

                                                                                                        cAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTctgg                                              <  1:2551634/150‑1 (MQ=255)

                                                                                                        cAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCAAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTctgg                                              <  1:6286526/150‑1 (MQ=255)

                                                                                                         aGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTctggc                                             <  1:1535119/150‑1 (MQ=255)

                                                                                                         aGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTctggc                                             <  2:7046641/150‑1 (MQ=255)

                                                                                                          gAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTctggct                                            <  1:2018032/150‑1 (MQ=255)

                                                                                                           aaCCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTctggctg                                           >  1:5390535/1‑150 (MQ=255)

                                                                                                           aaCCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTctggctg                                           <  2:8107511/150‑1 (MQ=255)

                                                                                                           aaCCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTctggctg                                           >  1:8747528/1‑150 (MQ=255)

                                                                                                              cAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTg                                        <  1:6855789/150‑1 (MQ=255)

                                                                                                              cAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTg                                        <  1:3410889/150‑1 (MQ=255)

                                                                                                               aGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGc                                       <  2:2741167/150‑1 (MQ=255)

                                                                                                                ggTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCt                                      <  2:5124150/150‑1 (MQ=255)

                                                                                                                 gTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTg                                     >  1:7304562/1‑150 (MQ=255)

                                                                                                                 gTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTg                                     <  1:1325965/150‑1 (MQ=255)

                                                                                                                 gTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTg                                     <  2:4277120/150‑1 (MQ=255)

                                                                                                                  tCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTgg                                    >  1:2871567/1‑150 (MQ=255)

                                                                                                                    aGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGAc                                  <  1:4550593/150‑1 (MQ=255)

                                                                                                                     gTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACg                                 >  1:1855442/1‑150 (MQ=255)

                                                                                                                        ccGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATg                              >  1:3010051/1‑150 (MQ=255)

                                                                                                                        ccGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATg                              <  2:8323157/150‑1 (MQ=255)

                                                                                                                        ccGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATg                              <  1:3190865/150‑1 (MQ=255)

                                                                                                                          gAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATGGc                            >  2:4712452/1‑150 (MQ=255)

                                                                                                                          gAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATGGc                            >  2:6621591/1‑150 (MQ=255)

                                                                                                                              aTGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATGGCGAAg                        <  2:3159344/150‑1 (MQ=255)

                                                                                                                                gCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATGGCGAAGTc                      >  2:6836612/1‑150 (MQ=255)

                                                                                                                                  aGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATGGCGAAGTCCa                    >  2:8657534/1‑150 (MQ=255)

                                                                                                                                     cGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATGGCGAAGTCCACCt                 >  1:4925598/1‑150 (MQ=255)

                                                                                                                                       cTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATGGCGAAGTCCACCTCa               >  1:4294596/1‑150 (MQ=255)

                                                                                                                                        tcgcctCGCCGATCTCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATGGCGAAGTCCACCTCaa              >  2:8801008/6‑150 (MQ=255)

                                                                                                                                        tcgcctCGCCGATCTCGGCGAAGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATGGCGAAGTCCACCTCaa              >  1:8166201/6‑150 (MQ=255)

                                                                                                                                         gTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATGGCGAAGTCCACCTCaaa             <  1:2490485/150‑1 (MQ=255)

                                                                                                                                          tCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATGGCGAAGTCCACCTCAAAc            <  1:3112262/150‑1 (MQ=255)

                                                                                                                                          gcctCGCCGATCTCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATGGCGaa                         >  2:7952792/4‑137 (MQ=255)

                                                                                                                                          gcTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATGGCGAAGTCCACCTCAAAc            >  2:7691209/2‑150 (MQ=255)

                                                                                                                                            ctCGCCGATCTCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATGGCGAAGTCCACCTCAAACGa          >  2:3219837/2‑150 (MQ=255)

                                                                                                                                                ccGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATGGCGAAGTCCACCTCAAACGAGGCg      >  2:7224134/1‑150 (MQ=255)

                                                                                                                                                  gagaTCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATGGCGAAGTCCACCTCAAACGAGGCGAc    >  2:4088551/1‑150 (MQ=255)

                                                                                                                                                   agaTCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATGGCGAAGTCCACCTCAAACGAGGCGACa   <  1:2255901/150‑1 (MQ=255)

CGACCCTGGACAACGGCGATGATCCGACAGCGCAGCCGCTGCAATTGAGCCCTGGCCCGCTGGGCAGCGTGATTCGCGTGGTGGACATACCGCCCGACAGCGTGCAGAACCAGGTCAGTGCCGAAGATGCAGCCGCTGTCTTCGCCGAGATCGGCGAGGCGAGTGCCGGCACGGGCAAAGCCGATTCGAAGCACAAGCTGATGCACCGCACCGAAACCCTGGACTACGGCATCGTTACCGAGGGCGAGGTCTGGCTGGTGCTGGACGATGGCGAAGTCCACCTCAAACGAGGCGACAT  >  NC_002947/3642585‑3642882

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`