| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,768,498 | C→T | 9.2% | intergenic (+26/+1649) | PP_3326 → / ← PP_3328 | hypothetical protein/ring‑cleaving dioxygenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,768,498 | 0 | C | T | 9.2% | 1080.7 / 69.6 | 370 | intergenic (+26/+1649) | PP_3326/PP_3328 | hypothetical protein/ring‑cleaving dioxygenase |
| Reads supporting (aligned to +/- strand): ref base C (170/166); new base T (18/16); total (188/182) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.58e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 | |||||||||||
Only 100 of 376 total aligned reads displayed.
ACGCAATGAAGGACTCAACATCATCGCGGCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTCGATTACCTGCATGATGGGCACTTGCATCACA > NC_002947/3768349‑3768647 | tGAAGGACTCTACATCCTCGCGGCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGa < 2:8801573/150‑1 (MQ=255) gACTCAACATCATCGCGGCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCGTCATGGCCGAGGTAt < 2:5578279/150‑1 (MQ=255) gACTCAACATCATCGCGGCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCGTCATGGCCGAGGTAt < 1:7253177/150‑1 (MQ=255) gACTCAACATCATCGCGGCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCGTCATGGCCGAGGTAt < 1:2485766/150‑1 (MQ=255) gACTCAACATCATCGCGGCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTAt < 2:7197040/150‑1 (MQ=255) aCTCAACATCATCGCGGCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATg < 1:3866049/150‑1 (MQ=255) aCTCAACATCATCGCGGCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATg > 2:4948444/1‑150 (MQ=255) tCAACATCATCGCGGCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGc > 1:2277775/1‑150 (MQ=255) tCAACATCATCGCGGCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGc > 1:7433472/1‑150 (MQ=255) cAACATCATCGCGGCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCa > 1:680303/1‑150 (MQ=255) aaCATCATCGCGGCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAg > 2:3012164/1‑150 (MQ=255) catcatCGCGGCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGtt < 2:3257067/150‑1 (MQ=255) catcatCGCGGCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGtt < 1:3586662/150‑1 (MQ=255) atcatcGCGGCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCGTCATGGCCGAGGTATgtcgctta < 1:1639799/150‑8 (MQ=39) tcatcGCGGCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTgg > 1:5599359/1‑150 (MQ=255) cgcgGCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGc > 2:69783/1‑150 (MQ=255) gcgGCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCg > 1:8771126/1‑150 (MQ=255) gCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTc < 2:7538200/150‑1 (MQ=255) gCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTc > 2:1815160/1‑150 (MQ=255) cccAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCg > 1:8398689/1‑150 (MQ=255) cccAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCg < 1:1040998/150‑1 (MQ=255) cccAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCg > 1:6552926/1‑150 (MQ=255) cTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGa < 1:7300241/150‑1 (MQ=255) cTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGa < 1:2163799/150‑1 (MQ=255) cccTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCTTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTg < 1:2408521/150‑1 (MQ=255) ccTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGc > 1:7620775/1‑150 (MQ=255) tGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCt < 2:7358435/150‑1 (MQ=255) ccACTGGCTGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTTAGCCGCACCACGAGTAAACTAAGCGACAGACCTCGGACATGACGGACGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGc < 1:855359/150‑1 (MQ=255) ccAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGc > 1:63506/1‑150 (MQ=255) aaTGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCaa > 2:2602053/1‑150 (MQ=255) aTGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAAc < 2:3867389/150‑1 (MQ=255) aTGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAAc < 1:4467322/150‑1 (MQ=255) ggCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCa < 2:7582911/150‑1 (MQ=255) gCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAg > 2:3330071/1‑150 (MQ=255) aCGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATc > 2:8447980/1‑150 (MQ=255) cGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATcc < 1:1555551/150‑1 (MQ=255) ggCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCg < 1:1366011/150‑1 (MQ=255) gCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGCGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCAcc < 1:2231687/150‑1 (MQ=255) ccccGTGGCCCAGCTGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCa > 2:1429400/1‑150 (MQ=255) cGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTACACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGa < 2:4141610/150‑1 (MQ=255) cccAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCAtt > 1:6003951/1‑150 (MQ=255) ccAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTg < 1:5471982/150‑1 (MQ=255) agcagAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGc > 1:7839701/1‑150 (MQ=255) agagCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGcaca > 2:5010430/1‑150 (MQ=255) gagTCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACaa < 2:2129962/150‑1 (MQ=255) gagCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACaa < 1:6994791/150‑1 (MQ=255) gCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGc < 1:8598374/150‑1 (MQ=255) tGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCCACCAGCATCCGCACCATGACCAGTGGCCCAAGCCCg > 1:3072647/1‑150 (MQ=255) tGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCg < 2:2283377/150‑1 (MQ=255) tGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCg < 2:5685727/150‑1 (MQ=255) ttcagttcaCTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGc > 2:8208686/1‑150 (MQ=255) gttcaCTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCACCCAGCATCCGCACCATGACCCTTGGCACAAGCCCGGCTGCg > 2:3086259/1‑150 (MQ=255) gttcaCTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCg < 2:420252/150‑1 (MQ=255) ttcaCTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCTATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCgg > 2:3765213/1‑150 (MQ=255) ttcaCTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCgg > 2:1694689/1‑150 (MQ=255) ttcaCTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCgg > 2:7040351/1‑150 (MQ=255) aCTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCca > 1:4129236/1‑150 (MQ=255) tGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCGTTGGCACAAGCCCGGCTGCGGCcaca < 2:3650261/150‑1 (MQ=255) gTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCacac < 2:1342991/150‑1 (MQ=255) tCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGTCCATTGGCACAAGCCCGGCTGCGGCCACACg > 1:6669962/1‑150 (MQ=255) cGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACgg < 2:2874100/150‑1 (MQ=255) ttCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCa > 2:5386525/1‑150 (MQ=255) ggTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGaa < 2:6281370/150‑1 (MQ=255) caccacGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATggg < 1:4948444/150‑1 (MQ=255) accacGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGc < 1:2591282/150‑1 (MQ=255) cacGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCAt > 2:6554358/1‑150 (MQ=255) acGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATg < 1:4767999/150‑1 (MQ=255) cGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGt < 2:2697105/150‑1 (MQ=255) gAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTc > 1:5750415/1‑150 (MQ=255) tAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTCGAt > 2:4047894/1‑150 (MQ=255) tAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTCGAt < 1:6714450/150‑1 (MQ=255) aaaCTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTCGAtt < 2:1031954/150‑1 (MQ=255) aaCTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTCGATTa > 2:2089628/1‑150 (MQ=255) tAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTCGATTACCt > 2:6010293/1‑150 (MQ=255) aactgccATACCTCGGCCGTCATGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTCGATTACCTg > 2:7799156/7‑150 (MQ=255) aGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTCGATTACCTGc < 2:7454564/150‑1 (MQ=255) gCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTCGATTACCTGCa < 1:299213/150‑1 (MQ=255) tgccATACCTCGGCCGTCATGGCCGAGGTATGTCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTCGATTACCTGCat > 2:6657148/4‑150 (MQ=255) aCATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTCGATTACCTGCatga > 1:3937250/1‑150 (MQ=255) cATACCTCGGCCGTCATGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGA‑GGGCCTGTCGATTACCTGCatgatg > 2:5148189/1‑150 (MQ=255) cATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTCGATTACCTGCatgat < 2:2437463/150‑1 (MQ=255) aTACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTCGATTACCTGCatgatg < 1:1696869/150‑1 (MQ=255) tACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTCGATTACCTGCATGATgg > 2:8351506/1‑150 (MQ=255) tACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTCGATTACCTGCATGATgg > 1:1077934/1‑150 (MQ=255) tACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTCGATTACCTGCATGATgg > 2:5204784/1‑150 (MQ=255) ccTCGGCCGTCATGGCCGAGGTATGTCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGc < 1:7963896/98‑1 (MQ=39) ccTCGGCCGTCATGGCCGAGGTATGTCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGc > 2:7963896/1‑98 (MQ=39) ccTCGGCCGTCATGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTCGATTACCTGCATGATGGGc > 2:6119160/1‑150 (MQ=255) ccTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTCGATTACCTGCATGATGGGc > 1:2073468/1‑150 (MQ=255) cTCGGCCGTCATGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTCGATTACCTGCATGATGGGCa > 2:8637604/1‑150 (MQ=255) cTCGGCCGTCATGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTCGATTACCTGCATGATGGGCa > 1:7046591/1‑150 (MQ=255) cTCGGCCGTCATGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACAATTGGCACAAGCCCGGCTGCGGCcaca > 2:4621213/1‑104 (MQ=255) cTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTCGATTACCTGCATGATGGGCa < 1:3291331/150‑1 (MQ=255) tCGGCCGTCATGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTCGATTACCTGCATGATGGGCAc > 1:4231535/1‑150 (MQ=255) tCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGTGGCCACACGGCAATCGAACACGATGGGCATGTCGATTACCTGCATGATGGGCAc > 1:5209964/1‑150 (MQ=255) ggCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTCGATTACCTGCATGATGGGCACtt < 1:3342082/150‑1 (MQ=255) ggCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTCGATTACCTGCATGATGGGCACtt < 1:5973093/150‑1 (MQ=255) ccATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTCGATTACCTGCATGATGGGCACTTGc < 2:1156996/150‑1 (MQ=255) ccATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTCGATTACCTGCATGATGGGCACTTGc > 2:5853573/1‑150 (MQ=255) aTGACTGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTCGATTACCTGCATGATGGGCACTTGCAt > 2:4813783/1‑150 (MQ=255) | ACGCAATGAAGGACTCAACATCATCGCGGCCCAGGCTACCCTGCCAATGGCAGACGGCAGCCCCGTGGCCCAGCAGAGCCTGTTCAGTTCACTGTCGTTCCTGGGTAAGCCGCACCACGAGTAAACTAAGCGACATACCTCGGCCATGACGGCCGAGGTATGGCAGTTGGAGGCGTTCGGAATGAGTGCCTGCAACCAGCATCCGCACCATGACCATTGGCACAAGCCCGGCTGCGGCCACACGGCAATCGAACACGATGGGCATGTCGATTACCTGCATGATGGGCACTTGCATCACA > NC_002947/3768349‑3768647 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |