| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,781,365 | T→G | 16.2% | intergenic (+55/‑88) | PP_3338 → / → PP_3339 | cytochrome bd‑type quinol oxidase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,781,365 | 0 | T | G | 16.2% | 395.8 / 13.8 | 187 | intergenic (+55/‑88) | PP_3338/PP_3339 | cytochrome bd‑type quinol oxidase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (54/97); new base G (21/15); total (75/112) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.22e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 207 total aligned reads displayed.
CGTCGATCAGCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCT > NC_002947/3781216‑3781514 | cgTCGATCAGCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCgtggt < 1:3673932/150‑1 (MQ=255) tCGATCAGCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTgc < 1:8421420/150‑1 (MQ=255) tCGATCAGCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTgc < 1:3988450/150‑1 (MQ=255) tCAGCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGccg > 2:3575885/1‑149 (MQ=255) ttggctCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCACTCGCCGTGGTGccccag > 1:5488331/6‑148 (MQ=255) cAGCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCtt < 2:5684584/150‑2 (MQ=255) aGCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGc < 2:4799905/150‑1 (MQ=255) cATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGa < 1:124974/150‑1 (MQ=255) cATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGa > 1:4971630/1‑150 (MQ=255) aTCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCGGCgcc > 1:2925838/1‑148 (MQ=255) tCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACa > 2:2312397/1‑150 (MQ=255) tCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGCCGGCGAcc > 2:1181764/1‑149 (MQ=255) tCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGCCGGCGAcc > 1:5914470/1‑149 (MQ=255) tGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGGGGCTGCGAaaaa > 1:5694180/1‑150 (MQ=255) gAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAg < 1:6442104/150‑1 (MQ=255) aaGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAgg < 1:6927842/150‑1 (MQ=255) aaGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAgg < 1:2799885/150‑1 (MQ=255) aGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGgc < 2:3124499/150‑1 (MQ=255) aGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGgc < 1:1675109/150‑1 (MQ=255) ccGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTCGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGgcgc < 2:6816463/150‑1 (MQ=255) cGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGca < 2:8341214/150‑1 (MQ=255) gCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGcac < 2:2093202/150‑1 (MQ=255) aGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCAGCGCCAAAAAGGCGcacc‑a > 1:2023354/1‑150 (MQ=255) gcgcCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGcacc‑ac < 2:3395209/150‑1 (MQ=255) cgccgcCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACC‑ACg > 2:8818870/1‑150 (MQ=255) ccgccCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACCAAAAGGCGCCCC‑ACGGa > 1:8816601/1‑150 (MQ=255) cgccCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCGGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGTGCCTGCGACAAAAAGGCGCACC‑ACGGaa < 2:1397975/150‑1 (MQ=255) gccCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACC‑ACCGacc > 2:6281509/1‑148 (MQ=255) agagCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGACAAAAAAGGGCACC‑CCCGAAcagtga > 1:6390679/1‑145 (MQ=255) ccAAGGCTTCATGCTGTTTGGAACACTTTTCATCCTGCCCTGTTGGGTTGGCTGATCCGACTTTTCATGTTGGCCGCCGGAATGCGCAGCAATTGAGCCCTCGCCTTGGTGCGCCTGCTACAAAAAGGCGCACC‑ACGGAACTTGTACAGc < 2:2728425/150‑1 (MQ=255) ccAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACC‑ACGGAACTTGTACAGc < 2:586291/150‑1 (MQ=255) aaGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACC‑ACCGAACATGTAAAGccc > 2:5602920/1‑150 (MQ=255) aGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGATTGTTCATGATGGCCGCCGGCATGCGCAGCCTTTGAGCCCCCGCGTTGGTGCGCCTGCGAAAAAAAGGCGAACC‑ACGGAACTTGTACAGCCCg < 2:5424211/150‑1 (MQ=255) aGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCGGCCACAAAAAAGCGCCCC‑AACCAACAGGTACAGcccc > 1:1361388/1‑149 (MQ=255) cATGCTGGTAGGCACACTGTTCATCCGGCCCAGTTGGCTTGGCTGATCCGAGTGTTCATGTGGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACC‑ACGGAACTTGTACAGCCCGCAACgg < 2:6316406/150‑1 (MQ=255) aTGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGACAAAAAAGCGCACC‑ACCGAACATGTACAGCCCCCCACGGa > 1:6555160/1‑150 (MQ=255) tgggggTCGGCACCCTGTTCTCCCGGCCCTGTGCGGTTGGCTGACCCGAGTTTTCATGTTGGCCGCCGGCATGCGCCGCATTTGCGCCCGGGCGGTGGTGCGCCTGCGACAAAATGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGAt < 2:2949979/146‑1 (MQ=255) gtgttcggCACACTGTTCCGCCTGCCCTTTTCGGTTGGCTTATCCGACTTTTCTTGAGGGCCGCGGGCTGGCGCAGCCTTTGCGCCCGGGCGGTGGTGCGCTTGCTAAAAAAAGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGc < 2:1635910/144‑1 (MQ=255) cTGGTTGGCACACTGTTCTGCCTGCCCTGTTGGCTGGGCTGATCCGACTGTTCTTGATGGCCGCCGGCCGGCGCAGCCTTTGAGCCCTCGCCGTGGTGCGCCGGCGACAAAAAGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGc < 2:4700073/150‑1 (MQ=255) ggTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGGGCCGGCGACAAAAAAGCGCACC‑ACCGAACATGTAAAGCCCCCCAACGATGCgg > 2:5968179/1‑150 (MQ=255) aGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGCGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCtt < 2:7216589/150‑1 (MQ=255) aGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCCCC‑ACGGAACATGTACAGCCCCCCACGGGTGCGGCtt > 2:4291762/1‑150 (MQ=255) aGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGCCCAAAAGGCGCCCCAACGGAA‑ATGTAAACCCCCCCACCGATGAGGCtt > 2:4049110/1‑150 (MQ=255) gCACACTGTACATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCGGCGACCAAAAGGCGCACC‑ACCGCAATTGTACACCCCGCCACGGATGCGGCTTaa > 2:4005363/1‑150 (MQ=255) acacTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGgc > 2:8349968/1‑107 (MQ=255) cacTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCGGCGGCAAAAAGGCGCCCC‑CCGGCCCGTGTTCAGCCCCCCACGGGGGCGGGGTAAttc > 2:3885041/1‑148 (MQ=255) cgggccctCCGGCCCAGTTCGGTTGGCTGAACCGCCTGTTCAGGTGGGCCGCGGGCATGCGCAGCCATTGCGCCCTCGCCGTGGGGCGCCGGCGACAAAAAGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATgcgc < 2:2552724/143‑1 (MQ=255) cTGTTCAGCCTGCCCTGTTCGCTTGGCTGATCCGAGTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGCGCCCTCGCCGTGGTGCGCCTGCGACAAAACGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATgcgc < 1:7204466/150‑1 (MQ=255) gTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCAGCGTCAAAAAGGCGCACC‑CCCGGAAGTGGAAAGCCCGCAAACGGTGCGGCGTAATgcgcgc > 2:2252242/1‑150 (MQ=255) aTCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGGCAAAAAGGCGCACC‑ACCGGACGTGTACCGCCCGCAACGGCTGCGGCGTAATGCGCGCCcta > 2:8423389/1‑150 (MQ=255) tCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGGGCCTGCGACAAAAAGGCGCACC‑CCCGCACATTTAAAGCCCCCAACCGCTGCGGCGTAATGCGCGCCaaaa > 2:3933145/1‑147 (MQ=255) tCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTTCGACAAAAAGGCGCACC‑ACGGAACTTGTAAAGCCCGCAAAGGATGCGGCGTAATTCGCGCCatat > 2:7803027/1‑150 (MQ=255) tGCCCTGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCTTTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCg < 2:4900234/150‑1 (MQ=255) tGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACC‑CCGGGACTTGTACAGCCCGCAACCGATGCGGCTTAATGCGCGCCATATTCg > 2:2821352/1‑150 (MQ=255) tGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCGGCGACAAAAAGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATAttag > 2:3504731/1‑148 (MQ=255) cccAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGCCGGCGGCAAAAAAGCGCCCC‑ACCGAACGTGTTAAGCCCCCAACCGGTGGGGCGGAATGCGCGCCAAATACGcg > 1:2805998/1‑149 (MQ=255) cgTTCGCTTGGCTGATCCTACTGTGCATGATGGCCGCCGGCTTGCGCAGCCATTGCGCCCTCGCCGGGGTGCGCCTGCGACAAAACGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCgg < 2:4423822/149‑1 (MQ=255) gTTCGCTTGGCTGATCCGACTGTTCTTGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCggg < 2:8620690/150‑1 (MQ=255) ggCTTGGATGATCCGACTGTTCTTGATGGCCGCCGGCATGCGCAGCCATTGAGCCCCCGCGGTGGTGCGCCTGCGAAAAAATGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGa < 2:2378405/149‑1 (MQ=255) ggttGGGTTATCGGACTGTTCTTGTTGGCGGGGGGCTTGCGCTGCCTTTGAGCCCTGGGCGTGGTGCGCCTGCGAGTAAAAGGCGCAGC‑ACGGTACTTGTACAGCCCGCAACGGATGCGGCTTTATGCGCGCCATATTGGCTCGGGTgtc < 2:664372/148‑3 (MQ=255) gCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGACAAAAAGGCGCCCC‑ACCCAACATGTACAGCCCCCAACCCATGACGCTTAATTCGCGCCAAATTAGCACggggtac > 2:5222622/1‑146 (MQ=255) ttGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGCCTGCGCCCAAAAGGCGCACC‑CCCGAACTTGTACAGCCCCCAACCGAGGCGGCTTAATTCGCGCCAAATTCGCTCGGGTGAcac > 2:6298855/1‑148 (MQ=255) ggCTGAGCCGACTGTTCATGTTGGCCGCCGGCATGCGCAGCCTTTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCAt < 2:6721002/150‑1 (MQ=255) cTGTTCCGAGTGTTCTTGCTGCCCGCCGGCTTGCGCAGCAATTGAGCCCTGGCGGTGGTGCGCCTGCCAAAAAAAGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGc < 1:8520239/150‑1 (MQ=255) tCCGACTGTTGGTGTTGGCGGCCGGCATGCGCAGCATTTGCGCCGTCGCCGTGGTGCGCCTGCCAAAAAACGGGCCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTc < 2:2995027/150‑1 (MQ=255) cccGACTGTTCCTGATGGCCGCCGGCATGCGCAGCCATTGCGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTc < 1:7937902/149‑1 (MQ=255) ccGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCAGCGCCAAAAAAGCGCACC‑AACGAACATGTAAAGCCCCCAACCGATGCGGCTTAATTCGCGCCAAAATAGCGCCGGTGAATAATGCTCTca > 2:3264572/1‑150 (MQ=255) ccGACTGTTCATGAGGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTca < 1:8779519/150‑1 (MQ=255) aCTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGGCAAAAAAGCGCACC‑ACCGAACGTTTACAGCCCCCCACCGATTCGGCTTAATTCGCGCCCAAATAGCTCGGGTGTCTCATGCGTTcacgt > 1:7346958/1‑150 (MQ=255) atgatgGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGGCAAAAAGGCGCAAC‑ACCGCACATGTAAAGCCCCCAAACGATGCGGCTTAATGAGCGCCAAATTCGCTCGGGTGGCGAAAGCTTTcacgtgcacggg > 2:2635763/1‑148 (MQ=255) tgtgggCCGCGGGCTGGCGCCGCCCTGGAGCCCTCGCGGGGGGGCGCCGGCCAAAAAATGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCacgtgcacgtgc < 1:8255281/146‑1 (MQ=255) tgatgGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGGGCCTGCGACAAAAAGGCGCACC‑ACGGCACTTTTACAGCCCGCCACGGCTGCGGCGTAATGCGCGCCCAATTCGCTCGGGGGGCGCATGGTTTGacgggcccgggc > 2:5498245/1‑150 (MQ=255) tgatgGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGCGGTGCGCCTGCGTCAAAAAGGCGCACC‑ACGGAACTTTTACATCCCGCAACGGATTCGGCTTAATGCGCGCCATATTAGCTAGGGTGAATAATGCTTTAacgtgcacgtgc > 2:3260750/1‑150 (MQ=255) atgGCCGCCGGCATGCGCCGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACgtgcacgtgcac < 2:2801877/150‑1 (MQ=255) gcgggattGCGCAGCATTTGCGCCCTGGCGGGGGGGGGCCTGCTAAAAAATGGCGCCCC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCttt < 1:3270603/143‑1 (MQ=255) gcgggCTTGCGCAGCCATTGCGCCCTCGCCTTGTTGCGCGTGCGACAAAATGGGGCACC‑TCGGAACTTGTACAGCCCGCAACGGATGGGGCTTAATGCGCTCCATTTTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCttt < 1:4276918/147‑1 (MQ=255) gcgggCATGCGCAGCCTTTGAGCCCTCGCGGTGGTGCGCCTGCGACAAAAAGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCttt < 1:2894267/147‑1 (MQ=255) gccgGCATGCGCAGCCATTGCGCCCTCGCCGTGGTGCGCCGGCGACAAAAAGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCttt < 2:8400561/150‑1 (MQ=255) gccgGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCttt < 2:7147625/150‑1 (MQ=255) gccgGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCttt < 2:7068118/150‑1 (MQ=255) gccgGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGAAAAAAAGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCttt < 2:4250374/150‑1 (MQ=255) gccgGCAGGCGCCGCCTTTGAGCCCGCGCCGGGGTGCGCCTGCGACACAACGGCCCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCttt < 1:8480961/150‑1 (MQ=255) ccgGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCCCCGGCGACCAAAAGGCGCACC‑ACCGCACGTGTACAGCCCGCAACGGATGCGGCTTTAAGCGCGCCATATTCGCGCGGGTGACTCATGCTTTCACCTGCACGGGCACATCTTTg > 2:363927/1‑150 (MQ=255) cgtcATGCGCAGCAATTGAGCCCTCGCCTTGGTGCGCCTGCTAAAAAAAGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGt < 1:5066442/147‑1 (MQ=255) cgGCATGCGCAGCCTTTGAGCCCTCGCGGTGGTGCGCCTGCGACAAAAAGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGt < 2:1236402/150‑1 (MQ=255) ggCAGGCGCAGCCATTGCGCCCGCGCGGTGGGGCGCCTGCGACAAAACGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTc < 2:1039621/150‑1 (MQ=255) gctgCCATTGCGCCCTCGCGGTGGTGCGCCTGCGACAAAAAGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCgc < 2:1276899/147‑1 (MQ=255) cAGCCATTGCGCCCTCGCCGGGGTGCGCCTGCGACAAAAAGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCgcc < 2:2468970/150‑1 (MQ=255) aGCCTTTGAGCCCTCGCGGTGGTGCGCCTGCTACAAAAAGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCgcct < 1:3575885/150‑1 (MQ=255) ccATTGAGCCCTCGCCGTGGGGGGCCTGCGCCAAAAAGGCGCACC‑ACCGAACCTGTAAAGCCCCCCACCGCTGCGGCTTAATGGGCGCCAACTTAGCGCGGGGGGCTCAATCGTTAGACTGCACCTGCACAGCGTTTTGTGTTAgcctgc > 2:3785510/1‑150 (MQ=255) ccgcGCCGTGGTGCGCCGGCCAAAAAAAGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTg < 1:7003556/147‑1 (MQ=255) gCCGTGGTGCGCCTGCGACAAAAAGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGt < 1:1372469/150‑1 (MQ=255) gtggtgCGCCTGCGACAAAATGGCGCCCC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCa < 1:3437492/150‑1 (MQ=255) gtggtgCGCCTGCGACAAAACGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCa < 2:2905789/150‑1 (MQ=255) gtggtgCGCCTGCGACAAAAAGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGTTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCa > 1:2529262/1‑150 (MQ=255) gtggtgCGCCTGCGACAAAAAGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCa > 1:3085771/1‑150 (MQ=255) tggtgCGCCTGCGACAAAAAGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCaa < 2:8220907/150‑1 (MQ=255) ggtgCGCGTGCCACAAAACGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAAc < 1:4788164/150‑1 (MQ=255) ggtgCGCCTGCGACAAAAAGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAAc < 2:2046238/150‑1 (MQ=255) gtgCGCCTGCGACAAAAAGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAAcc > 2:6179531/1‑150 (MQ=255) | CGTCGATCAGCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACC‑ACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCT > NC_002947/3781216‑3781514 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |