| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,874,852 | C→A | 5.4% | E354* (GAG→TAG) ‡ | PP_3419 ← | sigma‑54 dependent transcriptional regulator/response regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,874,852 | 0 | C | A | 5.4% | 1391.8 / 43.8 | 410 | E354* (GAG→TAG) ‡ | PP_3419 | sigma‑54 dependent transcriptional regulator/response regulator |
| Reads supporting (aligned to +/- strand): ref base C (205/183); new base A (12/10); total (217/193) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01 | |||||||||||
Only 100 of 437 total aligned reads displayed.
CAACGGCTCGTCAACCAAGGTCATGCACAGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAGGCGGAAGAACAGGTCACGCCTG > NC_002947/3874703‑3875000 | cAACGGCTCGTCAACCAAGGTCATGCACAGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTtcggcctc > 1:7495735/1‑150 (MQ=255) aaCGGCTCGTCAACCAAGGTCATGCACAGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTtcggcctcg > 2:8023111/1‑150 (MQ=255) gCTCGTCAACCAAGGTCATGCACAGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCg < 2:8467884/150‑1 (MQ=255) cTCGTCAACCAAGGTCATGCACAGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGa < 2:1073581/150‑1 (MQ=255) tCGTCAACCAAGGTCATGCACAGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGaa > 2:6987257/1‑150 (MQ=255) cGTCAACCAAGGTCATGCACAGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGaaa < 2:7695778/150‑1 (MQ=255) gTCAACCAAGGTCATGCACAGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTTCGGCCGAGGCCGaaa < 1:2412136/150‑1 (MQ=255) aaCCAAGGTCATGCACAGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAgcg < 1:7230999/150‑1 (MQ=255) aaCCAAGGTCATGCACAGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAgcg > 2:7595226/1‑150 (MQ=255) aCCAAGGTCATGCACAGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTAACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCACGGCCGAAAAgcgc > 1:443438/1‑150 (MQ=255) aCCAAGGTCATGCACAGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGGTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAgcgc < 1:3621390/150‑1 (MQ=255) ccAAGGTCATGCACAGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATACCCGAGCAGCAGGCTTTTCGGCCGAGGCCGaaagcctg < 2:890672/150‑6 (MQ=255) ccAAGGTCATGCACAGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCa < 1:1490698/150‑1 (MQ=255) aaGGTCATGCACAGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGACAAGCGCAgg > 1:2532017/1‑150 (MQ=255) aGGTCATGCACAGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGt > 1:1799224/1‑150 (MQ=255) gTCATGCACAGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTc < 2:5129111/150‑1 (MQ=255) tCATGCACAGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCg < 1:6997810/150‑1 (MQ=255) tCATGCACAGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCg > 2:1289537/1‑150 (MQ=255) cATGCACAGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCgg > 1:8432250/1‑150 (MQ=255) tGCACAGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCt > 2:1206763/1‑150 (MQ=255) acaGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGc > 2:2791395/1‑150 (MQ=255) acaGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGc < 1:7670141/150‑1 (MQ=255) acaGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAAGTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGc < 1:3271968/150‑1 (MQ=255) gTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATa < 1:5719192/150‑1 (MQ=255) ttCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCGCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAg > 1:5166922/1‑150 (MQ=255) tCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAgc > 2:4894908/1‑150 (MQ=255) aaCTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAgcgc < 2:8298084/150‑1 (MQ=255) aCTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGcc > 1:3967434/1‑150 (MQ=255) aCTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGcc > 1:7309882/1‑150 (MQ=255) aCTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGcc > 2:5476213/1‑150 (MQ=255) tGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCgg > 1:1400480/1‑150 (MQ=255) cgcgTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGACGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTAtg < 1:7862064/150‑1 (MQ=255) cgcTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTAtg < 2:3899217/150‑1 (MQ=255) cTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTAtggt < 2:366519/150‑1 (MQ=255) ttGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTAtggtg < 2:2735527/150‑1 (MQ=255) caccacCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGACAAGCGCAGGTTCGGCGTGCCATAGCGCCGGCTATGGTGGGc > 1:2898212/1‑150 (MQ=255) accaccTCGTTAGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAAATCACGCACAATGCCAGGCCAGCTATAAACGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAACCGCAGGGTCGGCTTGCCATAGCGCCCGCTATGGTGGGCa > 2:3956549/1‑150 (MQ=255) ccaccTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCaa < 1:2097466/150‑1 (MQ=255) ccaccTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCaa < 1:2767289/150‑1 (MQ=255) caccTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAg > 2:7420401/1‑150 (MQ=255) cGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAAt < 1:4291856/150‑1 (MQ=255) gTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATg < 2:1418083/150‑1 (MQ=255) gcgcCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCcgcg > 1:6288242/1‑150 (MQ=255) cAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAg > 1:6107540/1‑150 (MQ=255) cAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAg > 2:1991282/1‑150 (MQ=255) acCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAgg > 2:3428115/1‑150 (MQ=255) cGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGTC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGAt < 1:2305541/150‑1 (MQ=255) tGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTcc < 1:5715829/150‑1 (MQ=255) tCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGc < 1:400247/150‑1 (MQ=255) tCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGc < 1:6231029/150‑1 (MQ=255) ccAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTGCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGcc > 2:6720607/1‑150 (MQ=255) cAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGccc > 2:5185550/1‑150 (MQ=255) aGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAATAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGACATCCTGctac < 2:3011971/150‑4 (MQ=255) gTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGa < 1:648408/150‑1 (MQ=255) ttGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGaa < 1:8112852/150‑1 (MQ=255) ttGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGaa < 1:3490487/150‑1 (MQ=255) tGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAAt > 2:2064169/1‑150 (MQ=255) gcgcAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATa < 2:4292572/150‑1 (MQ=255) cgcACTTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATAc < 1:4674885/150‑1 (MQ=255) cAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAg < 1:3163858/150‑1 (MQ=255) cAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAg < 2:3548520/150‑1 (MQ=255) aaTTCACGCACAGTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAgg < 2:1576171/150‑1 (MQ=255) aCGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCgg > 2:7364588/1‑150 (MQ=255) aCGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCgg > 1:338905/1‑150 (MQ=255) cGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGAC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGc > 2:407793/1‑150 (MQ=255) acaTTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCAcc > 2:2314517/1‑150 (MQ=255) aTTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTAGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACGGGCGCGGCACCtt > 1:6773539/1‑150 (MQ=255) ttGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTc < 1:1081775/150‑1 (MQ=255) tGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCa < 1:1956458/150‑1 (MQ=255) gccaggccagCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAg < 1:8751539/150‑1 (MQ=255) caggccagCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCCTAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAggg > 1:5025588/1‑150 (MQ=255) caggccagCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAggg < 2:55851/150‑1 (MQ=255) aggccagCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGc < 2:8643449/150‑1 (MQ=255) aggccagCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGc < 2:4346254/150‑1 (MQ=255) agCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATaa < 2:4537348/150‑1 (MQ=255) gCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAAt < 1:3656522/150‑1 (MQ=255) ataACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCg > 2:5886879/1‑150 (MQ=255) acccGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCGGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGaa < 2:4691909/148‑1 (MQ=255) aaCCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGaa < 2:3180118/150‑1 (MQ=255) aCCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAg > 2:5291431/1‑150 (MQ=255) ccGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGACTACAGGCGCGGCACCTTCAGGGCGATAATGCGAAgg > 2:4579800/1‑150 (MQ=255) ccGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAgg < 1:4805266/150‑1 (MQ=255) ccGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAgg < 1:7519428/150‑1 (MQ=255) cGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATCCAGGCGCGGCACCTTCAGGGCGATAATGCGAAGGc > 2:6302525/1‑150 (MQ=255) gcagcaGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAGGCGga < 1:8305338/150‑1 (MQ=255) cagcagGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAGGCGgaa < 1:163453/150‑1 (MQ=255) agcagGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAGGCGgaag > 1:3843143/1‑150 (MQ=255) tgcgcttttCGGCCGAGGCCG‑AAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAGGCGgaagaa > 1:3041095/7‑150 (MQ=255) agGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAGGCGGAAGAAc > 2:2434035/1‑150 (MQ=255) ggC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAGGCGGAAGAACa < 1:5476213/150‑1 (MQ=255) ggC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAGGCGGAAGAACa > 2:6463322/1‑150 (MQ=255) gC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAGGCGGAAGAACAg < 2:4138312/150‑1 (MQ=255) cttttCGGCCGAGGCCGAAAGGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAGGCGGAAGAACAg > 2:7303273/3‑150 (MQ=255) cttttCGGCCGAGGCCGAAAGGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAGGCGGAAGAACAg > 2:5810263/3‑150 (MQ=255) cttttCGGCCGAGGCCG‑AAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAGGCGGAAGAACAgg > 1:5844813/3‑150 (MQ=255) ttttCGGCCGAGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAGGCGGAAGAACAgg > 2:617182/2‑150 (MQ=255) tttCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAGGCGGAAGAACAGGt > 2:2151677/1‑150 (MQ=255) tttCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAGGCGGAAGAACAGGt > 1:5319364/1‑150 (MQ=255) gcctcggccGAATAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAGGCGGAAGAACAGGTCACGc < 2:937685/150‑1 (MQ=255) ctcggccGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAGGCGGAAGAACAGGTCACGCCt > 2:1721365/1‑150 (MQ=255) | CAACGGCTCGTCAACCAAGGTCATGCACAGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGC‑TTTCGGCCTCGGCCGAAAAGCGCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAGGCGGAAGAACAGGTCACGCCTG > NC_002947/3874703‑3875000 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |