| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,044,650 | C→T | 5.3% | P172S (CCT→TCT) ‡ | PP_3560 → | LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,044,650 | 0 | C | T | 5.3% | 1256.7 / 36.8 | 392 | P172S (CCT→TCT) ‡ | PP_3560 | LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (189/182); new base T (12/9); total (201/191) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.57e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.59e-01 | |||||||||||
Only 100 of 402 total aligned reads displayed.
GCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATGGAACTGGACAGCCAG > NC_002947/4044501‑4044799 | gTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCt < 2:5290329/150‑1 (MQ=255) tGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTg > 1:4782218/1‑150 (MQ=255) ggCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGa < 1:1975804/150‑1 (MQ=255) cTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCt > 2:3418778/1‑150 (MQ=255) cTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCt > 2:586874/1‑150 (MQ=255) tCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTg > 1:7416898/1‑150 (MQ=255) cGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCTCAGGGCTgg < 2:5976174/150‑1 (MQ=255) gCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCg < 1:7050473/150‑1 (MQ=255) cATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCTCAGGGCTGGcaat < 2:3309763/150‑4 (MQ=255) cATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCgg < 2:5234534/150‑1 (MQ=255) aTGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCggg > 1:7705102/1‑150 (MQ=255) gTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCTCAGGGCTGGcaatggc < 1:3516665/150‑7 (MQ=255) cggcggAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGtata < 1:4926215/150‑1 (MQ=255) ggcggAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAg > 2:1258297/1‑150 (MQ=255) gcggAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGc < 1:1935718/150‑1 (MQ=255) gcggAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGc < 2:5483561/150‑1 (MQ=255) ggAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGt < 2:8132352/150‑1 (MQ=255) ggcgcggcgcGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCa < 1:8279626/150‑1 (MQ=255) ggcgcggcgcGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCa < 1:1368689/150‑1 (MQ=255) gcggcgcgTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGtt > 1:7034500/1‑150 (MQ=255) cggcgcgTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTg < 2:3387721/150‑1 (MQ=255) cgcgTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGACCCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTg < 1:750959/150‑1 (MQ=255) cgcgTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTg < 2:429462/150‑1 (MQ=255) gcgTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTgg < 1:1130867/150‑1 (MQ=255) tGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGgcca < 1:2541555/150‑1 (MQ=255) tGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGgcca < 2:5396753/150‑1 (MQ=255) ggAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGgccag > 1:6754269/1‑150 (MQ=255) gAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGgccagc > 2:2430263/1‑150 (MQ=255) gAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTc < 2:7866969/150‑1 (MQ=255) cTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTg < 1:4629667/150‑1 (MQ=255) cTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTg < 1:6082570/150‑1 (MQ=255) cTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTg < 2:6346982/150‑1 (MQ=255) cTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGCGCCGCAGTTGCTGGCCAGCAAGCCATTCCTg > 2:3504549/1‑150 (MQ=255) tCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTGTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTgc > 1:6341820/1‑150 (MQ=255) gATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTgcgc > 1:6511899/1‑150 (MQ=255) aGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGa < 2:8296504/150‑1 (MQ=255) aGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGa > 1:5786852/1‑150 (MQ=255) gCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGAc < 1:5378306/150‑1 (MQ=255) gATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACaa < 1:3418778/150‑1 (MQ=255) aTCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAg > 1:3201662/1‑150 (MQ=255) accaccGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGt > 1:7283292/1‑150 (MQ=255) accaccGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGt > 2:7562235/1‑150 (MQ=255) ccaccGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTg > 2:4017397/1‑150 (MQ=255) ccaccGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTg > 2:1890385/1‑150 (MQ=255) caccGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGc > 1:5045289/1‑150 (MQ=255) caccGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGc > 1:3992541/1‑150 (MQ=255) caccGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGc > 1:368376/1‑150 (MQ=255) caccGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGc > 1:8800443/1‑150 (MQ=255) accGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGcc > 2:6704638/1‑150 (MQ=255) ccGAACCGGTCAGCCCTTTCCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGGCAGCCATTCCTGCGCTTCGACAAGCGTGCCt < 2:8051987/150‑1 (MQ=255) ccGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCt > 2:167964/1‑150 (MQ=255) gAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTgg > 2:8615921/1‑150 (MQ=255) aaCCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTggg > 1:1239853/1‑150 (MQ=255) tCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGggccggcc < 2:5163819/150‑1 (MQ=255) tCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGggccggcc < 2:2237101/150‑1 (MQ=255) aGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGccggccgg < 1:2767908/150‑1 (MQ=255) gCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCcggccggc > 2:367217/1‑150 (MQ=255) cccTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCa > 1:339113/1‑150 (MQ=255) cTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGggccgg < 2:1620659/142‑1 (MQ=255) cTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGggccgg > 1:1620541/1‑142 (MQ=255) cTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGa > 2:462720/1‑150 (MQ=255) ccGCGGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCATGCCTGGGCCGGCCGGCAGATCGAg > 1:8006375/1‑150 (MQ=255) ccGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAg > 1:7143251/1‑150 (MQ=255) cGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGc > 1:6592910/1‑150 (MQ=255) cGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGc > 1:8586174/1‑150 (MQ=255) gCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCa < 2:2709796/150‑1 (MQ=255) cAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAg < 2:5045289/150‑1 (MQ=255) gAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGa > 2:5611239/1‑150 (MQ=255) tGGACTTCACACTGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTAc > 2:2620137/1‑150 (MQ=255) tGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTAc < 1:3823176/150‑1 (MQ=255) gACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTAcgc > 1:4324711/1‑150 (MQ=255) ttCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTAcgccgc < 1:1548601/150‑1 (MQ=255) acacCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCcag > 1:2368475/1‑150 (MQ=255) gCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAgcaggt > 1:5707246/1‑150 (MQ=255) cTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAgcaggtg > 1:5569960/1‑150 (MQ=255) ttCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAgcaggtgcag < 1:175549/150‑1 (MQ=255) aGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGa > 2:6204106/1‑150 (MQ=255) ggACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAg > 2:6870338/1‑150 (MQ=255) gACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGc > 1:8138843/1‑150 (MQ=255) aCCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCg < 2:4946021/150‑1 (MQ=255) aCCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCg > 1:3593273/1‑150 (MQ=255) cGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGaa < 1:2179611/150‑1 (MQ=255) gTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAAc < 1:4453030/150‑1 (MQ=255) tttCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACt > 1:4022577/1‑150 (MQ=255) tCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGa < 1:7889332/150‑1 (MQ=255) tCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGa < 1:2919245/150‑1 (MQ=255) cTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGAt < 2:2399015/150‑1 (MQ=255) cTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGAt < 2:1987732/150‑1 (MQ=255) tGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATg < 2:4342028/150‑1 (MQ=255) gggCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATgg > 2:8773713/1‑150 (MQ=255) gCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATGGaa < 1:385221/150‑1 (MQ=255) tGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGTGAACTGATGGAACTGGa < 2:2936362/150‑1 (MQ=255) ggCCAGCTCAGGGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCCGGTGAGCGAACTGATGGAACTGGa > 2:5561815/2‑150 (MQ=255) gCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATGGAACTGGAc < 2:735506/150‑1 (MQ=255) ccAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATGGAACTGGACa > 2:7114346/1‑150 (MQ=255) aGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATGGACCTGGACAGc > 2:6617813/1‑150 (MQ=255) cccTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATGGAACTGGACAGCCa < 2:3904455/150‑1 (MQ=255) ccTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTATGCCGCCAGCAGGTGCAGGTGAGCGAACTGATGGAACTGGACAGCCAg < 2:7412140/150‑1 (MQ=255) ccTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATGGAACTGGACAGCCAg < 2:6095427/150‑1 (MQ=255) ccTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATGGAACTGGACAGCCAg < 2:1191383/150‑1 (MQ=255) | GCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATGGAACTGGACAGCCAG > NC_002947/4044501‑4044799 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |