| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,044,652 | T→A | 5.5% | P172P (CCT→CCA) ‡ | PP_3560 → | LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,044,652 | 0 | T | A | 5.5% | 1368.0 / 43.6 | 400 | P172P (CCT→CCA) ‡ | PP_3560 | LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (190/188); new base A (13/9); total (203/197) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.13e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.90e-01 | |||||||||||
Only 100 of 405 total aligned reads displayed.
GTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATGGAACTGGACAGCCAGGA > NC_002947/4044503‑4044801 | gTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCt > 1:671913/1‑150 (MQ=255) ggCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGa < 1:1975804/150‑1 (MQ=255) gCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAg < 2:515216/150‑1 (MQ=255) cTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCt > 2:586874/1‑150 (MQ=255) cTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCt > 2:50007/1‑150 (MQ=255) tCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTg > 1:7416898/1‑150 (MQ=255) cGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCTCAGGGCTgg < 2:5976174/150‑1 (MQ=255) gggCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGc > 2:5464177/1‑150 (MQ=255) gggCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGc > 1:6587595/1‑150 (MQ=255) aTGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCggg < 2:520336/150‑1 (MQ=255) aTGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCggg > 1:7705102/1‑150 (MQ=255) gcggAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGc < 1:1935718/150‑1 (MQ=255) ggAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGt < 2:8132352/150‑1 (MQ=255) ggcgcggcgcGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCa < 1:1368689/150‑1 (MQ=255) ggcgcggcgcGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCa < 1:8279626/150‑1 (MQ=255) gcgcggcgcgTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAg > 2:380392/1‑150 (MQ=255) gcgcggcgcgTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAg > 2:2919245/1‑150 (MQ=255) gcgcgTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCt < 2:3119232/150‑1 (MQ=255) cgcgTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGACCCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTg < 1:750959/150‑1 (MQ=255) gcgTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTgg > 2:4253041/1‑150 (MQ=255) gcgTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTgg < 1:1130867/150‑1 (MQ=255) tGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGgcca < 1:4601183/150‑1 (MQ=255) gTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGgctggccagcaac < 1:876399/150‑4 (MQ=255) gAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTc < 2:7866969/150‑1 (MQ=255) cTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTg < 1:6082570/150‑1 (MQ=255) cTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTg < 2:6346982/150‑1 (MQ=255) tCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTGTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTgc > 1:6341820/1‑150 (MQ=255) aGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGa < 1:3298696/150‑1 (MQ=255) aGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGa < 2:8296504/150‑1 (MQ=255) aGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGa > 1:5786852/1‑150 (MQ=255) gATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCTTTCCTGCGCTTCGACaa < 2:2336302/150‑1 (MQ=255) accaccGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGt > 1:7283292/1‑150 (MQ=255) accaccGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGt > 2:7562235/1‑150 (MQ=255) caccGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACACGCGTGc > 2:4457711/1‑150 (MQ=255) caccGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGc > 1:3992541/1‑150 (MQ=255) caccGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGc < 1:2120321/150‑1 (MQ=255) accGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGcc > 1:5069907/1‑150 (MQ=255) accGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGcc > 2:6704638/1‑150 (MQ=255) ccGAACCGGTCAGCCCTTTCCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGGCAGCCATTCCTGCGCTTCGACAAGCGTGCCt < 2:8051987/150‑1 (MQ=255) gAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTgg < 1:357615/150‑1 (MQ=255) gAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTgg > 2:8615921/1‑150 (MQ=255) aaCCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTggg > 1:1239853/1‑150 (MQ=255) gTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGggccggc > 2:5381997/1‑150 (MQ=255) gTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGggccggc < 1:4902341/150‑1 (MQ=255) gTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGggccggc < 2:1864659/150‑1 (MQ=255) tCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGggccggcc > 1:3489831/1‑150 (MQ=255) aGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGccggccgg < 2:526904/150‑1 (MQ=255) cTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGggccgg > 1:1620541/1‑142 (MQ=255) cTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGggccgg < 2:1620541/142‑1 (MQ=255) cTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGa < 1:4706571/150‑1 (MQ=255) ttACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGAt > 2:1239746/1‑150 (MQ=255) aCCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCg < 2:2415821/150‑1 (MQ=255) ccGCGGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCATGCCTGGGCCGGCCGGCAGATCGAg > 1:8006375/1‑150 (MQ=255) ccGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAg > 1:7143251/1‑150 (MQ=255) cGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGc > 1:8586174/1‑150 (MQ=255) gCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCa < 1:7048051/150‑1 (MQ=255) gCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCa < 2:2709262/150‑1 (MQ=255) gAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGa > 2:5611239/1‑150 (MQ=255) aaCCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGaa < 1:4311416/150‑1 (MQ=255) cTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGgccagccagc > 1:3414819/1‑94 (MQ=255) cTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGgccagccagc < 2:3414819/94‑1 (MQ=255) tGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTAc > 1:7005138/1‑150 (MQ=255) gACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTAcgc < 1:2524657/150‑1 (MQ=255) gACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTAcgc > 2:1025966/1‑150 (MQ=255) cTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTAcgccg > 2:3643210/1‑150 (MQ=255) ttCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTAcgccgc > 1:3638448/1‑150 (MQ=255) ttCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTAcgccgc < 1:1548601/150‑1 (MQ=255) acacCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCcag > 1:2313758/1‑150 (MQ=255) acCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCcagca > 2:4009945/1‑150 (MQ=255) cGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAgcagg > 1:2887830/1‑150 (MQ=255) gCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAgcaggt > 1:5707246/1‑150 (MQ=255) tGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAgcaggtgc < 1:2620137/150‑1 (MQ=255) ttCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAgcaggtgcag < 1:175549/150‑1 (MQ=255) ttCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAgcaggtgcag < 2:433604/150‑1 (MQ=255) ttCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTACCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAgcaggtgcag > 2:3353050/1‑150 (MQ=255) aGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGa < 2:1926546/150‑1 (MQ=255) aGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGa < 2:2179213/150‑1 (MQ=255) aGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGa > 2:6204106/1‑150 (MQ=255) ggACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAg > 2:6870338/1‑150 (MQ=255) gACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGc > 1:8138843/1‑150 (MQ=255) tttCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACt > 1:4022577/1‑150 (MQ=255) tttCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACt < 1:5528408/150‑1 (MQ=255) ttCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTg > 2:3472120/1‑150 (MQ=255) tCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGa < 1:7889332/150‑1 (MQ=255) cTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGAt < 1:3799075/150‑1 (MQ=255) gggCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATgg > 2:8773713/1‑150 (MQ=255) ggCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGTAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATGGa < 1:50007/150‑1 (MQ=255) gCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATGGaa < 1:385221/150‑1 (MQ=255) cATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATGGAACt < 2:1666301/150‑1 (MQ=255) ccggCCAGCTCAGGGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATGGAACTg > 1:4427673/4‑150 (MQ=255) ccggCCAGCTCAGGGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTACGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGAGCAGGTGAGCGAACTGATGGAACTg > 1:3192735/4‑150 (MQ=255) ggCCAGCTCAGGGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCCGGTGAGCGAACTGATGGAACTGGa > 2:5561815/2‑150 (MQ=255) ggCCAGCTCAGGGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATGGAACTGGa > 1:6478062/2‑150 (MQ=255) gCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATGGAACTGGAc < 2:735506/150‑1 (MQ=255) ccAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATGGAACTGGACa > 2:7114346/1‑150 (MQ=255) ccAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATGGAACTGGACa > 2:2582884/1‑150 (MQ=255) aGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATGGACCTGGACAGc > 2:6617813/1‑150 (MQ=255) cccTGAGCGGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGACCTGATGGAACTGGACAGCCa < 2:4879579/150‑1 (MQ=255) ccTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTATGCCGCCAGCAGGTGCAGGTGAGCGAACTGATGGAACTGGACAGCCAg < 2:7412140/150‑1 (MQ=255) ccTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATGGAACTGGACAGCCAg < 2:6095427/150‑1 (MQ=255) | GTGGCCTCGGGCATGTCGGCGGAGCTGGCGCGGCGCGTGGAAGACGGTGAGCTCGATGCAGCGATCACCACCGAACCGGTCAGCCCTTACCCGCAGAACCTGGACTTCACACCGCTGTTCGAGGACCGTTTCTGGGCCATTGCCAGCCCTGAGCTGGCCGGGTATAGCGTGCCGCAGTTGCTGGCCAGCCAGCCATTCCTGCGCTTCGACAAGCGTGCCTGGGCCGGCCGGCAGATCGAGCAGGAACTACGCCGCCAGCAGGTGCAGGTGAGCGAACTGATGGAACTGGACAGCCAGGA > NC_002947/4044503‑4044801 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |