| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,161,134 | A→T | 5.0% | L217* (TTA→TAA) | PP_3659 ← | transcriptional regulator, AraC family |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,161,134 | 0 | A | T | 5.0% | 1335.6 / 36.0 | 388 | L217* (TTA→TAA) | PP_3659 | transcriptional regulator, AraC family |
| Reads supporting (aligned to +/- strand): ref base A (174/193); new base T (11/9); total (186/202) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.47e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 414 total aligned reads displayed.
GGTGGAACTGGACATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTGAGGAGGACG > NC_002947/4160986‑4161282 | gTGGAACTGGACATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTaaa > 1:4562156/1‑150 (MQ=255) tGGAACTGGACATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTaaaa < 2:5883310/150‑1 (MQ=255) ggAACTGGACATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTaaaaa < 2:4706/150‑1 (MQ=255) gAACTGGACATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAg > 2:6543074/1‑150 (MQ=255) aaCTGGACATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAgg > 2:518424/1‑150 (MQ=255) cTGGACATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCa < 2:3872419/150‑1 (MQ=255) cTGGACATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCa < 1:5790188/150‑1 (MQ=255) cTGGACATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCa < 1:2186680/150‑1 (MQ=255) tGGACATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAg < 1:4753601/150‑1 (MQ=255) aCATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGaa < 2:8570656/150‑1 (MQ=255) aCATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGaa > 2:7249018/1‑150 (MQ=255) cATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAag < 1:7039902/150‑1 (MQ=255) aTGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAaga > 2:2341633/1‑150 (MQ=255) tCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGaaa > 1:2846987/1‑150 (MQ=255) aGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTCTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACgg < 2:6030742/150‑1 (MQ=255) tCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGc < 1:2043001/150‑1 (MQ=255) tCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGc < 2:5985561/150‑1 (MQ=255) cgGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGtt < 2:1518049/150‑1 (MQ=255) gggCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGttt > 1:6384660/1‑150 (MQ=255) gggCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGttt < 1:5558743/150‑1 (MQ=255) ggCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTg < 2:2085302/150‑1 (MQ=255) ggCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTg < 2:3591127/150‑1 (MQ=255) gCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTgg < 1:4394023/150‑1 (MQ=255) gCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTgg < 2:2534033/150‑1 (MQ=255) gCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTgg < 2:5620008/150‑1 (MQ=255) gCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCaaa > 2:8304912/1‑150 (MQ=255) aTCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCATGAAGAGAAACGGGCGTTTGGCAAACCtt > 1:2984585/1‑150 (MQ=255) aTCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCtt > 2:2194522/1‑150 (MQ=255) aTCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCtt < 1:6705111/150‑1 (MQ=255) aTCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCtt < 1:6575163/150‑1 (MQ=255) tCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTg > 1:8566749/1‑150 (MQ=255) gAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTa < 2:6729685/150‑1 (MQ=255) ttCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGc > 1:8261140/1‑150 (MQ=255) tCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGcc < 1:8802043/150‑1 (MQ=255) cAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCa < 1:4448173/150‑1 (MQ=255) aGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAg > 1:1179396/1‑150 (MQ=255) aGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAg > 2:7013921/1‑150 (MQ=255) gCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGaa > 1:6060372/1‑150 (MQ=255) ccACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGACGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCATTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGaaa < 2:436834/150‑1 (MQ=255) aCGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGc > 1:7804114/1‑150 (MQ=255) gagagaGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGa < 2:5421941/150‑1 (MQ=255) agagagCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGaa < 1:6404182/150‑1 (MQ=255) agagagCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGaa < 1:8328415/150‑1 (MQ=255) agagCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAaca < 1:516570/150‑1 (MQ=255) gCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAg > 2:1327473/1‑150 (MQ=255) cAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGc > 2:8431219/1‑150 (MQ=255) gTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCgg > 1:4904701/1‑150 (MQ=255) ttttAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGa > 2:2691666/1‑150 (MQ=255) ttttAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGa < 1:337327/150‑1 (MQ=255) tttAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAg < 1:1389292/150‑1 (MQ=255) aaTCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGtt > 1:7378171/1‑150 (MQ=255) aaTCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGtt > 1:5996441/1‑150 (MQ=255) tCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCt > 1:3887884/1‑150 (MQ=255) gccgccGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTAt < 2:1643341/150‑1 (MQ=255) gccgccGGATCATAATGCTCGTACTGTCGTCGTTACGGTATATCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTAt > 2:4517690/1‑150 (MQ=255) ggATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGccc > 1:8679390/1‑150 (MQ=255) ggATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGccc > 1:7525215/1‑150 (MQ=255) aTCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTc < 2:8797368/150‑1 (MQ=255) tCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTcc > 2:2969922/1‑150 (MQ=255) tCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTT‑AAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCa > 2:4637802/1‑150 (MQ=255) cATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCa < 1:7885262/150‑1 (MQ=255) cATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCa > 2:3370466/1‑150 (MQ=255) aTAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCAc > 1:4195560/1‑150 (MQ=255) tCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGAttt > 2:7781924/1‑150 (MQ=255) gTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTcc < 1:6839213/150‑1 (MQ=255) tcgtcgTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACaa > 2:3282483/1‑150 (MQ=255) tcgtTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAg < 2:4148219/150‑1 (MQ=255) cgtTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAgc < 1:1012055/150‑1 (MQ=255) cgtTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAgc < 2:7473895/150‑1 (MQ=255) tACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCa < 1:5670450/150‑1 (MQ=255) tACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCa > 1:8525375/1‑150 (MQ=255) ggTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTc > 2:4955917/1‑150 (MQ=255) gTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCaaa < 2:1926267/68‑1 (MQ=255) gTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCaaa > 1:1926267/1‑68 (MQ=255) tATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGa < 2:4894651/150‑1 (MQ=255) tATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGa > 1:5375151/1‑150 (MQ=255) tttCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATa < 1:8110633/150‑1 (MQ=255) cacaAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTc > 1:2692139/1‑150 (MQ=255) acaAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCg > 2:810963/1‑150 (MQ=255) caAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGc < 1:1219629/150‑1 (MQ=255) aaGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCt > 1:3590139/1‑150 (MQ=255) aaGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCt < 2:5797998/150‑1 (MQ=255) gAAGTTACTTGTCTTGCATATTAAAAAGTCAGGAAGAGAAACGGGCGTTTGTCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTgtc < 2:7869239/150‑1 (MQ=255) gAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTgtc < 1:2497439/150‑1 (MQ=255) ttGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCg > 2:6366842/1‑150 (MQ=255) tcttcctGCCTTTTTAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCg > 1:3179460/7‑150 (MQ=255) ggCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGc > 1:6252129/1‑150 (MQ=255) gTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTga < 2:6686858/150‑1 (MQ=255) gTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTga < 1:2628904/150‑1 (MQ=255) ctGCCTTTTTAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTga > 1:734328/2‑150 (MQ=255) ctGCCTTTTTAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTga > 2:1224358/2‑150 (MQ=255) tGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTgag > 2:4194167/1‑150 (MQ=255) tGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTgag < 1:5911365/150‑1 (MQ=255) cTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTgaggag < 2:5346383/150‑1 (MQ=255) cTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTgaggag < 2:1836817/150‑1 (MQ=255) ttttAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTGaggagg > 2:3064131/1‑150 (MQ=255) ttttAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTGaggagg > 1:3951458/1‑150 (MQ=255) ttttAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTGaggagg > 1:1686381/1‑150 (MQ=255) ttttAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTGaggagg > 2:4284430/1‑150 (MQ=255) ttAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTGAGGAGGAc < 1:462429/150‑1 (MQ=255) | GGTGGAACTGGACATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTGAGGAGGACG > NC_002947/4160986‑4161282 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |