| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,343,487 | A→T | 5.6% | intergenic (+114/+28) | PP_3812 → / ← PP_5632 | lipase/allo‑isoleucine metabolism protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,343,487 | 0 | A | T | 5.6% | 769.0 / 26.6 | 252 | intergenic (+114/+28) | PP_3812/PP_5632 | lipase/allo‑isoleucine metabolism protein |
| Reads supporting (aligned to +/- strand): ref base A (116/119); new base T (10/4); total (127/125) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.68e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.96e-02 | |||||||||||
Only 100 of 256 total aligned reads displayed.
AGGCGGGCAACGAACTTAAAGTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTACGAATCGAACT > NC_002947/4343339‑4343636 | aGGCGGGCAACGAACTTAAAGTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCATTAGCGGGTaaa > 2:3763010/1‑150 (MQ=255) gCGGGCAACGAACTTAAAGTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAAcc < 1:6450205/150‑1 (MQ=255) gggCAACGAACTTAAAGTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCcg < 2:2798714/150‑1 (MQ=255) gggCAACGAACTTAAAGTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCGTTCGCGGGTGAACCcg > 1:924497/1‑150 (MQ=255) ggCAACGAACTTACAGTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCGTCTATTTGCGGCAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCcgc < 2:5986863/150‑1 (MQ=255) ggCAACGAACTTAAAGTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCcgc < 1:776084/150‑1 (MQ=255) aaCGAACTTAAAGTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGACAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCCCGaa > 2:2284878/1‑150 (MQ=255) aCGAACTTAAAGTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTTTACCCGCGaaa < 2:4719821/150‑1 (MQ=255) cGAACTTAAAGTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAg < 2:6790154/150‑1 (MQ=255) ttAAATTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGTGTATTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGAGGTGCGGCAGGTCCGGCCATATAGCGGGTAAAACAGAGAAAGGGGCg > 2:3996820/1‑150 (MQ=255) ttAAAGTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCg > 2:5291193/1‑150 (MQ=255) ttAAAGTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCg > 1:6189790/1‑150 (MQ=255) ttGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGTGTATTTTGATTCTTTTTGCGGAAACAGCCCTCATGCTTAAATGAATCTGCAAGCGGTGCGGCAGTTCCGTCACTTTCGCGGTTAAACCCGCGAAAGGGCCGGCaaa < 2:1859488/149‑1 (MQ=255) gctgTGAGGCGATGAGCATTAGACCCGCCTGGGGGGGTCTTTTGCTTCTATTTGCGGAAACCGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTc < 1:733766/147‑1 (MQ=255) cAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATTAATCAGCCAGCGGTGCGGCTGGTCCGGCCCTTTCGCGGTTAAACCCGCGAACGGGCCGGCAAATCCTGCTCa < 2:752387/150‑1 (MQ=255) cAGGGAGGCGATGGGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGTAAACAGCCCGCTGGCTTCAATGAATCTGCCTGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCTAAAGGGCCGGCAAATCCTGCTCa < 2:8114537/150‑1 (MQ=255) agtctaTGAGAAATACACCCGCCTGGGCGGGTATTTTTATTATATTTGCGTAAACAGCCCGCAGGATTAAATGAATCTGCCAGCGTTGCGGCAGGTCCGGCCCTTTCGCTGTTAAACCCGCTAAAGGGCCGGCAAATCCTGCTCAGGGCt < 2:3441074/145‑1 (MQ=255) ggCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTc > 2:1981250/1‑150 (MQ=255) aaGCAAAAGACCCGCCCAGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCAGCTCAGGGCTCAAAccc > 1:5833288/2‑150 (MQ=255) gCAAAAGACCCGCCCAGGCGGGTCTATTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTAGCGGGTAAAACCGCCAAAGGGCCGGCAAAACCTGCTCAGGGCGCAAAcccat > 2:5893577/1‑148 (MQ=255) cAATCGCCCCGCCGGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCCGGCTTCAATGAATCTGCCAGCGGTGCGGCTGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTc < 1:1434572/150‑1 (MQ=255) aaaaGACCCGCCCAGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAAGGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTcc > 2:7146791/4‑150 (MQ=255) aaTAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCTGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTcc > 2:6568663/1‑150 (MQ=255) aaTAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCGTTGCCCGGTAAACCCCCCCCACGGCCGGCACAAACAGCGCAGGGCGCAAAaccctac > 1:8369543/1‑146 (MQ=255) aTAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGGCCGTTCGCGGGGACACCCCCGCAAGGGGCGGCCAAACAAGCGCACGGCGCAAAACCCTccc > 1:3176130/1‑149 (MQ=255) aTAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCGTTCGCGGGTAAACCCGCGCAAGGGCCGGCAAATACAGCTCAGGGCTCAAACCCTTccc > 2:2968276/1‑149 (MQ=255) tAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAgg > 2:7699454/1‑114 (MQ=255) gACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑Caa < 2:3570708/150‑1 (MQ=255) ccGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCGTTCGCGGGGAAACCCGCCAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAAACCATCCA‑CAAAGa > 1:4965488/1‑150 (MQ=255) cgcgTGGGCGGGTCTTTTGCTTATATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGTTAAACCCGCGAATGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGAt < 2:1461581/150‑1 (MQ=255) gCCTGGGCGGGTCTTTTGCTTCTATTTGCGTAAACAGCCCGCTGGATTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATc < 2:2170845/150‑1 (MQ=255) cggggCGGGTCTTTTGCTTCTTTTTGCGTAAACCGCCCGCAGCCTAAAATTAATCTGCCAGCGGTGCGGCCGGTCCGGCCCTTCCGCGGGTAACCCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCAc < 1:414847/148‑1 (MQ=255) gCGGGTCTTTTGCTTCTTTTTGCGGTAACAGCCCGCAGGCTTCATTGATTCTGCGAGGGGTGCGGCAGGTCCGGCCCTTTCGGGGGTAACCCCGGGAACTGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCa < 2:2369946/150‑1 (MQ=255) gggTCTTTTGCTTCTATTTGCGGAACCAGCCCGCCGGCTTCAATTAATCGGCCAGCGGTGGGGCTGGGCCGGCCGTTTGGCGGGTAAACCCGCTAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGc < 1:512036/150‑1 (MQ=255) gggTATTTTGCTTCTTTTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCTGGGGTGGGGCTGGTCCGGCCCTTTCGCGGTTAAACCCGCTAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGc < 1:6785363/150‑1 (MQ=255) ggTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTAGCGGGTAAACCCGCGAAAGTGCCCGCAAAAACTGCTCAGGGCTCAAAACCATACA‑CAAAGATAAACACAGcc > 2:313696/1‑150 (MQ=255) gTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTAGCGGGTCAACCCCCGAAAGGGCCCGCAAAAACAGCTCAGGGCGCAAAACCGTCCA‑CAAATATAACCACAGCCt > 1:1329781/1‑150 (MQ=255) cTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTc < 2:6907960/150‑1 (MQ=255) gCTTCTTTTTGCGTAACCAGCCCGCTGGCTTCATTTAATCTGCCTGGGGGGCGGCTGGCCCGGCCCTTTCGCGGTTAACCCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCAc < 1:336640/150‑1 (MQ=255) gCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCAc < 1:3597736/150‑1 (MQ=255) gCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCAc > 2:7196106/1‑150 (MQ=255) gCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCAc < 2:5300121/150‑1 (MQ=255) tATTTGCGGAAACAGCCCGCTGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCtt < 2:3903036/150‑1 (MQ=255) tATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCtt < 2:7239400/150‑1 (MQ=255) tATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCtt < 2:8348522/150‑1 (MQ=255) aTTTGCGGAAACAGCCCGCAGGCTTCAATGACTCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTTAACCCGCGCAAGGGCCGGCACATCCTGCTCAGGGCGCAAACCCTTCCA‑CAAGGGGCCCCTCAGCCTTCGCCAccccggg > 2:5685636/1‑147 (MQ=255) aTTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGCAAGGGCCGGCAAATCCTGCTCCGGGCTCAAACCCGTCCA‑CAATGATCACCGCAGCCTTCGCCACCCCGTg > 2:6177179/1‑150 (MQ=255) aTTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTg < 2:4448224/150‑1 (MQ=255) aTTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTg < 2:3228173/150‑1 (MQ=255) tttGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCATCCA‑CAATGATCACCGCAGCCTTAGCCACCCCTTgg > 2:121641/1‑150 (MQ=255) gCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGGCCATTGGCGGGGCAACCCCCGGAACGGGCGGCCAAAACAGGTCAGGGCGCAAAACCGTGCACCAATCAAC‑CCGCAGCCCTCGCCCCCCCCTGGCgg > 1:7518111/1‑149 (MQ=255) gAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATgg < 2:2852940/150‑1 (MQ=255) aaCAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCCGCCAAAACTGCTCAGGGCTCAAACCCATCCA‑CAAAGATAACCACAGCCATCGCCACCCCGTGGCGATGGCt > 2:1710223/1‑150 (MQ=255) gCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCATGGCGATGGCTGCAt > 2:1338527/1‑150 (MQ=255) gCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCCGGTAAACCCGCGAAAGGGCCGGCAAATACAGCTCAGGGCTCAAAACCGTACA‑CAAAGATAACCACAGCCGGAGCCACCCCATGGCGATGGCTGCATgacg > 2:1028004/1‑147 (MQ=255) gCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCTAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTg < 2:2659520/150‑1 (MQ=255) gCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTg < 1:4899902/150‑1 (MQ=255) gCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTg < 2:3464299/150‑1 (MQ=255) cTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTgg < 2:7254389/150‑1 (MQ=255) tCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCGTTCGCGGGGAAACCCGCGAAAGGGCCGGCAAATCCTGCGCCGGGCGCAAACCCATCCA‑CAAAGATCACCTCCGCCGTCGCCACCCCGTGGCGCTGGCGGCCTGCCGCTTGGTa > 2:5140387/1‑150 (MQ=255) aaTGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACa < 1:1981250/150‑1 (MQ=255) ccggaccTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAAACCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCGTGGCGATGGCTGCATGCCTCTTGGTACAg > 2:7896068/7‑150 (MQ=255) aTGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTAGCGGGTAAAACCGCGAAAGGGCCGGCAAATCCTGCGCAGGGCTCAAACCCGTCCA‑CAAAGATCACCGCAGCCTTCGCCAACCCGTGGCGATGGCTGCATGCCTCATGGTACAg > 2:5230012/1‑150 (MQ=255) aTCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGcgcg < 1:6375593/150‑1 (MQ=255) aTCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGcgcg < 1:7812685/150‑1 (MQ=255) tCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAAACCTGCTCAGGGCTCAAAACCTTCCA‑CAATGATCACCACAGCCATCGCCACCCCTTGGCGATTGCTGCATGCCTCGTGGTACAGCGCgg > 1:6599750/1‑150 (MQ=255) tCTGCCAGCGGTGCGGCAGGTCCGGCCCATTCGCGGGGAAACCCGCGAAAGGGCCGGCCAAACCAGCACAGGGCGCAAACCCGTCCA‑CACAGATCACCTCAGCCGTCGCCACCCCGTGGCGCTGGCGGCCTGCCGCGTGGTGCAgcgccg > 1:5841881/1‑148 (MQ=255) ccgcccccGGTGCGGCAGGTCCGGCCCTATCGCGGGTAACCCCGCGAAAGGGCCGGCAACTCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGa < 1:5330454/143‑1 (MQ=255) cTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGa < 2:6381492/150‑1 (MQ=255) tGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCAGCTCAGGGCTCAAACCCGTCCA‑CAAAGATCACCGCAGCCTTCGCCACCCCGTGGCGATGGCTGCCTGCCGCGTGGTACAGCGCGGAg > 2:485820/1‑150 (MQ=255) tGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCCCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCACCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCGTGGTACAGCGCGGAg > 2:8444707/1‑150 (MQ=255) ccAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCAGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCACCCATCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCg > 2:6953718/1‑150 (MQ=255) aGCGGTGCGGCAGGTCCGACCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGt < 2:1791434/150‑1 (MQ=255) gCGGCAGGTCCGGCCCTTTCGGGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAgg < 1:3040410/150‑1 (MQ=255) gCGGCAGGTCCGGCCCTTGCGCGGGTAACCCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CACTGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAgg < 2:8225293/150‑1 (MQ=255) gCAGGTCCGGCCCTTTAGCGGGTAAACCCGCGAAAGGGCCCGCAAAACCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCACAGCCATCGCCACCCCATGGCGAAGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGa > 2:4344841/1‑150 (MQ=255) gCAGGTCCGCCCCTTTCGCGTGTAAACCCGCTAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGa < 1:6907389/150‑1 (MQ=255) cAGGTCCGGCCCGTTCGCCGGTAAAACCGCGAAAGGGCCGGCCAAAACAGCTCAGGGCTCAAAACCATCCA‑CAAAGATAACCCCAGCCATCGCCCCCCCTTGGCGATGGCAGCCTGCCTCTTGGTACAGCGCGGAGCGGGAACACGCGAc > 2:5382155/1‑150 (MQ=255) aGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACg < 2:343110/150‑1 (MQ=255) gTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGc < 2:8716725/150‑1 (MQ=255) ggCCCTTTCGCGGGTTTACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTgc > 1:1804702/1‑150 (MQ=255) cccTTGCGCGGGTACACCCGCGAACGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTgcgc < 1:3199988/150‑1 (MQ=255) cTTTCGCGGGTTTACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGt > 1:275320/1‑150 (MQ=255) cTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGt > 2:2976006/1‑150 (MQ=255) tttCGCGTGTAAACCCGCTAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCTGAGCGGTAACATGCGACGGCCTGCGCGTa < 1:4516675/150‑1 (MQ=255) tttCGCGGGTTTACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTa > 1:5650881/1‑150 (MQ=255) tttCGCGGGTTTACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTa > 1:5186303/1‑150 (MQ=255) tttCGCGGGTTTACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTa > 1:8732584/1‑150 (MQ=255) tttCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTa > 1:6234050/1‑150 (MQ=255) tttCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTa > 1:5068395/1‑150 (MQ=255) tttCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTa > 1:7357709/1‑150 (MQ=255) tttCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTa > 1:8072944/1‑150 (MQ=255) ttCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTAc < 1:4285157/150‑1 (MQ=255) ttCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTAc > 1:1842293/1‑150 (MQ=255) gggTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTACGAATc > 1:402402/1‑150 (MQ=255) gctAAACCCGCTAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTACGAATCg < 1:2904114/148‑1 (MQ=255) tAACCCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTACGAATCGaa < 1:2284878/150‑1 (MQ=255) aaCCCGCTAAAGGGCCGGCAAATCCTGCTCAGGGCTCATACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTACGAATCGAACt < 2:1852216/150‑1 (MQ=255) aaCCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CCATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTACGAATCGAACt < 1:3809473/150‑1 (MQ=255) aaCCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTACGAATCGAACt < 1:7146791/150‑1 (MQ=255) | AGGCGGGCAACGAACTTAAAGTGCATCTGCAGTGAGGCGATGAGCAATAGACCCGCCTGGGCGGGTCTTTTGCTTCTATTTGCGGAAACAGCCCGCAGGCTTCAATGAATCTGCCAGCGGTGCGGCAGGTCCGGCCCTTTCGCGGGTAAACCCGCGAAAGGGCCGGCAAATCCTGCTCAGGGCTCAAACCCTTCCA‑CAATGATCACCTCAGCCTTCGCCACCCCTTGGCGATGGCTGCATGCCTCTTGGTACAGCGCGGAGCGGTAACAGGCGACGGCCTGCGCGTACGAATCGAACT > NC_002947/4343339‑4343636 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |