BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	4,362,490	T→A	6.0%	V289E (GTG→GAG) ‡	PP_3831 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	4,362,490	0	T	A	6.0%	1278.2 / 44.6	384	V289E (GTG→GAG) ‡	PP_3831	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (157/204); new base A (10/13); total (167/217)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.67e-01

Only 100 of 409 total aligned reads displayed.

TACTGCCAAGGACTATCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCTGTTGTTTCTTCAGGCACTTGAGGAACAGGAGG  >  NC_002947/4362341‑4362639

  cTGCCAAGGACTATCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAgtgt                                                                                                                                                     <  2:307994/150‑1 (MQ=255)

  cTGCCAAGGACTATCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAgtgt                                                                                                                                                     <  2:6111307/150‑1 (MQ=255)

   tGCCAAGGACTATCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGtgtg                                                                                                                                                    >  1:1556824/1‑150 (MQ=255)

   tGCCAAGGACTATCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGtgtg                                                                                                                                                    >  2:2831689/1‑150 (MQ=255)

   tGCCAAGGACTATCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGtgtg                                                                                                                                                    >  1:993738/1‑150 (MQ=255)

   tGCCAAGGACTATCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGtgtg                                                                                                                                                    >  1:7729597/1‑150 (MQ=255)

   tGCCAAGGACTATCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGtgtg                                                                                                                                                    >  2:6824318/1‑150 (MQ=255)

    gCCAAGGACTATCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGc                                                                                                                                                   >  2:4993419/1‑150 (MQ=255)

     ccAAGGACTATCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGcc                                                                                                                                                  >  2:3684514/1‑150 (MQ=255)

     ccAAGGACTATCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGcc                                                                                                                                                  >  1:7181517/1‑150 (MQ=255)

       aaGGACTATCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCgg                                                                                                                                                <  2:3271201/150‑1 (MQ=255)

       aaGGACTATCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCgg                                                                                                                                                >  1:8334153/1‑150 (MQ=255)

       aaGGACTATCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCgg                                                                                                                                                >  1:7394912/1‑150 (MQ=255)

        aGGACTATCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCATGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCACACTGCCGgc                                                                                                                                               <  2:6073106/150‑1 (MQ=255)

        aGGACTATCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCACACTGCCGgc                                                                                                                                               <  2:5176110/150‑1 (MQ=255)

             tATCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATGCGCCGGCACACTGCCGgcgtatt                                                                                                                                          <  1:1005286/150‑5 (MQ=255)

             tATCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCgctgc                                                                                                                                          >  2:2430289/1‑150 (MQ=255)

              aTCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCgctgct                                                                                                                                         <  1:4787342/150‑1 (MQ=255)

              aTCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCgctgct                                                                                                                                         <  1:3186692/150‑1 (MQ=255)

               tCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTa                                                                                                                                        >  1:8791061/1‑150 (MQ=255)

                cGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTAc                                                                                                                                       <  2:7031276/150‑1 (MQ=255)

                 gCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACa                                                                                                                                      >  2:5444370/1‑150 (MQ=255)

                  cACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACAt                                                                                                                                     >  2:1425490/1‑150 (MQ=255)

                   aCCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATc                                                                                                                                    <  2:838018/150‑1 (MQ=255)

                       gggCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCAcc                                                                                                                                >  2:4643338/1‑150 (MQ=255)

                       gggCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCAcc                                                                                                                                >  1:6108706/1‑150 (MQ=255)

                           cGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGc                                                                                                                            >  2:4878042/1‑150 (MQ=255)

                                gcagcCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTc                                                                                                                       <  1:3622211/150‑1 (MQ=255)

                                 cagcCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCt                                                                                                                      <  2:4523673/150‑1 (MQ=255)

                                  agcCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTg                                                                                                                     <  2:4715682/150‑1 (MQ=255)

                                    ccTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGa                                                                                                                   <  1:4591564/150‑1 (MQ=255)

                                    ccTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGa                                                                                                                   <  1:5733354/150‑1 (MQ=255)

                                    ccTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGa                                                                                                                   <  2:5624002/150‑1 (MQ=255)

                                             gAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGc                                                                                                          >  1:5355248/1‑150 (MQ=255)

                                              aaCCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGcc                                                                                                         <  1:1900215/150‑1 (MQ=255)

                                               aCCTGCTAAAGCCCTTGGCATGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCt                                                                                                        >  1:2109852/1‑150 (MQ=255)

                                                ccTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCtt                                                                                                       >  2:1495247/1‑150 (MQ=255)

                                                 cTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTg                                                                                                      <  2:6707174/150‑1 (MQ=255)

                                                   gCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTggg                                                                                                    <  1:4511331/150‑1 (MQ=255)

                                                   gCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTggg                                                                                                    <  2:8180086/150‑1 (MQ=255)

                                                   gCTAAAGCCATTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTggg                                                                                                    <  1:273540/150‑1 (MQ=255)

                                                    cTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTgggg                                                                                                   >  2:1187261/1‑150 (MQ=255)

                                                        aGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGcc                                                                                               <  1:5906638/150‑1 (MQ=255)

                                                          cccTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTg                                                                                             <  2:1840636/150‑1 (MQ=255)

                                                           ccTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTgg                                                                                            >  1:3351906/1‑150 (MQ=255)

                                                           ccTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTgg                                                                                            <  1:7943587/150‑1 (MQ=255)

                                                                gCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAAt                                                                                       >  2:5805036/1‑150 (MQ=255)

                                                                  cTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAAttt                                                                                     >  1:1371763/1‑150 (MQ=255)

                                                                    gggAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGc                                                                                   <  1:6837912/150‑1 (MQ=255)

                                                                    gggAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGACAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGc                                                                                   <  2:2614464/150‑1 (MQ=255)

                                                                     ggAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGcc                                                                                  >  2:6185120/1‑150 (MQ=255)

                                                                     ggAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGcc                                                                                  >  2:1576133/1‑150 (MQ=255)

                                                                           ggAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGaaaaa                                                                            <  2:5694533/150‑1 (MQ=255)

                                                                             agagTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAAcc                                                                          <  1:5211871/150‑1 (MQ=255)

                                                                                 tGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCgtgt                                                                      >  2:7278231/1‑150 (MQ=255)

                                                                                 tGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAAGTTGCCGAAAAACCgtgt                                                                      >  2:6472099/1‑150 (MQ=255)

                                                                                  gAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGtgtg                                                                     >  1:2449042/1‑150 (MQ=255)

                                                                                    aGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTgcg                                                                   <  1:8140533/150‑1 (MQ=255)

                                                                                      ccAAACGCCTGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCa                                                                 >  1:2563565/1‑150 (MQ=255)

                                                                                      ccAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCa                                                                 >  1:5579924/1‑150 (MQ=255)

                                                                                       aattggCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAAtt                                                                                      <  1:5101307/123‑1 (MQ=255)

                                                                                         aaCGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAg                                                              >  2:7958776/1‑150 (MQ=255)

                                                                                             ccAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCt                                                          <  2:5717023/150‑1 (MQ=255)

                                                                                             ccAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCt                                                          <  1:5121406/150‑1 (MQ=255)

                                                                                                    gccgcAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCg                                                   <  1:4132584/150‑1 (MQ=255)

                                                                                                      cgcAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCgga                                                 <  2:7729597/150‑1 (MQ=255)

                                                                                                      cgcAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCgga                                                 >  2:3945743/1‑150 (MQ=255)

                                                                                                      cgcAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCgga                                                 >  1:5674016/1‑150 (MQ=255)

                                                                                                      cgcAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCgga                                                 >  1:7545232/1‑150 (MQ=255)

                                                                                                          aTAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGaa                                             <  2:2006936/150‑1 (MQ=255)

                                                                                                           tAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAg                                            <  1:2327547/150‑1 (MQ=255)

                                                                                                            aGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGc                                                            >  2:5556335/1‑133 (MQ=255)

                                                                                                            aGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGt                                           >  1:4637970/1‑150 (MQ=255)

                                                                                                              tCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTTCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTgg                                         <  2:4336123/150‑1 (MQ=255)

                                                                                                               ccGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGc                                        <  1:3821947/150‑1 (MQ=255)

                                                                                                                cGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGcc                                       >  2:8242086/1‑150 (MQ=255)

                                                                                                                cGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGcc                                       >  1:1217329/1‑150 (MQ=255)

                                                                                                                cGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGcc                                       >  1:5467858/1‑150 (MQ=255)

                                                                                                                 gCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCt                                      >  2:4223877/1‑150 (MQ=255)

                                                                                                                 gCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCt                                      >  1:3048191/1‑150 (MQ=255)

                                                                                                                   cAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTg                                    <  2:2319294/150‑1 (MQ=255)

                                                                                                                   cAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTg                                    <  1:6943704/150‑1 (MQ=255)

                                                                                                                        aGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCtgtt                               <  1:289519/150‑1 (MQ=255)

                                                                                                                        aGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCtgtt                               <  1:4878042/150‑1 (MQ=255)

                                                                                                                         gCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCtgttg                              <  1:4275159/150‑1 (MQ=255)

                                                                                                                          ccACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCtgttgt                             <  2:8736574/150‑1 (MQ=255)

                                                                                                                          ccACGCGCCTGGGCAAAACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGGGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTGGCtgttgt                             >  1:8706308/1‑150 (MQ=255)

                                                                                                                           cACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGACGTGGCCTTGCTgttgtt                            >  2:406216/1‑150 (MQ=255)

                                                                                                                            aCGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCTGTTGttt                           >  2:5305119/1‑150 (MQ=255)

                                                                                                                             cgcgCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCTGTTGTttc                          <  1:6486060/150‑1 (MQ=255)

                                                                                                                               cgcCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCTGTTGTttctt                        <  1:8513921/150‑1 (MQ=255)

                                                                                                                                gcCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCTGTTGTttcttc                       <  1:8267370/150‑1 (MQ=255)

                                                                                                                                 ccTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCTGTTGTTTCTTCa                      <  2:3413557/150‑1 (MQ=255)

                                                                                                                                  cTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCTGTTGTTTCTTCAg                     >  1:1814684/1‑150 (MQ=255)

                                                                                                                                     ggCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCTGTTGTTTCTTCAGGCa                  >  2:1732304/1‑150 (MQ=255)

                                                                                                                                         aTACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCTGTTGTTTCTTCAGGCACTTg              >  1:6668128/1‑150 (MQ=255)

                                                                                                                                          tACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCTGTTGTTTCTTCAGGCACTTGa             <  1:1490929/150‑1 (MQ=255)

                                                                                                                                           gcGCCGGCACACTGCCGGCGTTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCTGTTGTTTCTTCAGGCACTTGAg            >  1:8068885/2‑150 (MQ=255)

                                                                                                                                            cGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACAATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGTCCTTGCTGTTGTTTCTTCAGGCACTTGAgg           <  2:2109852/150‑1 (MQ=255)

                                                                                                                                                   aGTGTGCCGGCGCTGCTACATCCACCCGGTAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCTGTTGTTTCTTCAGGCACTTGAGGAACagga    <  2:5112773/150‑1 (MQ=255)

TACTGCCAAGGACTATCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCTGTTGTTTCTTCAGGCACTTGAGGAACAGGAGG  >  NC_002947/4362341‑4362639

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`