Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 4,362,491 G→C 6.0% V289V (GTG→GTC) ‡ PP_3831 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,362,4910GC 6.0% 1302.2 / 51.2 384V289V (GTG→GTC) ‡PP_3831hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (157/204);  new base C (10/13);  total (167/217)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 408 total aligned reads displayed.

CTGCCAAGGACTATCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCTGTTGTTTCTTCAGGCACTTGAGGAACAGGAGG  >  NC_002947/4362343‑4362639
                                                                                                                                                    |                                                                                                                                                    
cTGCCAAGGACTATCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAgtgt                                                                                                                                                     <  2:6111307/150‑1 (MQ=255)
 tGCCAAGGACTATCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGtgtg                                                                                                                                                    >  1:1556824/1‑150 (MQ=255)
 tGCCAAGGACTATCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGtgtg                                                                                                                                                    >  1:8027866/1‑150 (MQ=255)
 tGCCAAGGACTATCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGtgtg                                                                                                                                                    >  2:6824318/1‑150 (MQ=255)
   ccAAGGACTATCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGcc                                                                                                                                                  >  2:3684514/1‑150 (MQ=255)
     aaGGACTATCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCgg                                                                                                                                                >  1:8334153/1‑150 (MQ=255)
      aGGACTATCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCATGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCACACTGCCGgc                                                                                                                                               <  2:6073106/150‑1 (MQ=255)
      aGGACTATCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCACACTGCCGgc                                                                                                                                               <  2:5176110/150‑1 (MQ=255)
         ccTATCGCACCTGGGCCGGCAGCAGCCGGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGCGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAAGACGCCGGCAGTGTGCCGGCgct                                                                                                                                            <  2:6262269/149‑1 (MQ=255)
         aCTATCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCACACTGCCGgcgta                                                                                                                                            <  1:6376689/150‑3 (MQ=255)
           tATCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATGCGCCGGCACACTGCCGgcgtatt                                                                                                                                          <  1:1005286/150‑5 (MQ=255)
           tATCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCgctgc                                                                                                                                          >  2:2430289/1‑150 (MQ=255)
            aTCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCgctgct                                                                                                                                         <  1:3186692/150‑1 (MQ=255)
             tCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTa                                                                                                                                        >  2:5002416/1‑150 (MQ=255)
              cGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTAc                                                                                                                                       <  2:7031276/150‑1 (MQ=255)
              cGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTAc                                                                                                                                       <  1:4855846/150‑1 (MQ=255)
               gCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACa                                                                                                                                      >  2:5444370/1‑150 (MQ=255)
                cACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCACCCGCCAGGTCGCCGCAAGAGTCCGCCTGGTCGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACAt                                                                                                                                     <  2:2854363/150‑1 (MQ=255)
                 aCCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATc                                                                                                                                    <  2:838018/150‑1 (MQ=255)
                     gggCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCAcc                                                                                                                                >  2:4643338/1‑150 (MQ=255)
                     gggCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCAcc                                                                                                                                >  1:6108688/1‑150 (MQ=255)
                              gcagcCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTc                                                                                                                       <  1:3622211/150‑1 (MQ=255)
                               cagcCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCt                                                                                                                      <  2:4523673/150‑1 (MQ=255)
                                agcCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTg                                                                                                                     <  2:4715682/150‑1 (MQ=255)
                                  ccTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGa                                                                                                                   <  2:5624002/150‑1 (MQ=255)
                                  ccTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGa                                                                                                                   <  1:4591564/150‑1 (MQ=255)
                                  ccTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGa                                                                                                                   <  1:5733354/150‑1 (MQ=255)
                                          tGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATg                                                                                                           <  2:1614608/150‑1 (MQ=255)
                                           gAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGc                                                                                                          >  1:5355248/1‑150 (MQ=255)
                                            aaCCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGcc                                                                                                         <  1:1900215/150‑1 (MQ=255)
                                             aCCTGCTAAAGCCCTTGGCATGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCt                                                                                                        >  1:2109852/1‑150 (MQ=255)
                                              ccTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCtt                                                                                                       >  2:1495281/1‑150 (MQ=255)
                                               cTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTg                                                                                                      <  2:6707174/150‑1 (MQ=255)
                                                 gCTACAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTggg                                                                                                    <  2:1449708/150‑1 (MQ=255)
                                                 gCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTggg                                                                                                    <  1:4511331/150‑1 (MQ=255)
                                                 gCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTggg                                                                                                    <  2:8180086/150‑1 (MQ=255)
                                                 gCTAAAGCCATTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTggg                                                                                                    <  1:273540/150‑1 (MQ=255)
                                                      aGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGcc                                                                                               <  1:5906638/150‑1 (MQ=255)
                                                        cccTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTg                                                                                             <  2:1840636/150‑1 (MQ=255)
                                                         ccTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTgg                                                                                            >  1:3351906/1‑150 (MQ=255)
                                                              gCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAAt                                                                                       >  2:5805036/1‑150 (MQ=255)
                                                                cTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAAttt                                                                                     >  1:1371763/1‑150 (MQ=255)
                                                                  gggAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGc                                                                                   <  1:8792884/150‑1 (MQ=255)
                                                                  gggAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGACAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGc                                                                                   <  2:2614464/150‑1 (MQ=255)
                                                                         ggAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGaaaaa                                                                            <  2:5694533/150‑1 (MQ=255)
                                                                           agagTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAAcc                                                                          <  1:5211871/150‑1 (MQ=255)
                                                                           agagTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCATGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAAcc                                                                          <  1:4721308/150‑1 (MQ=255)
                                                                             tgTGAAGCCTAACGCCAGGTCGCCGCAATAGTCCGCCTGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGTCAGTTCTTGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCgt                                                                        <  1:7242932/149‑1 (MQ=255)
                                                                               tGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCgtgt                                                                      >  2:7278231/1‑150 (MQ=255)
                                                                               tGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAAGTTGCCGAAAAACCgtgt                                                                      >  2:6472099/1‑150 (MQ=255)
                                                                                gAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGtgtg                                                                     >  1:2449042/1‑150 (MQ=255)
                                                                                  aGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTgcg                                                                   <  1:8140533/150‑1 (MQ=255)
                                                                                    ccAAACGCCTGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCa                                                                 >  1:2563565/1‑150 (MQ=255)
                                                                                    ccAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCa                                                                 >  1:5579924/1‑150 (MQ=255)
                                                                                     aattggCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAAtt                                                                                      <  1:5101307/123‑1 (MQ=255)
                                                                                       aaCGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAg                                                              >  2:7958776/1‑150 (MQ=255)
                                                                                           ccAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCt                                                          <  2:5717023/150‑1 (MQ=255)
                                                                                           ccAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCt                                                          <  1:5121406/150‑1 (MQ=255)
                                                                                                  gccgcAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCg                                                   <  1:4132584/150‑1 (MQ=255)
                                                                                                    cgcAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCgga                                                 <  2:7729597/150‑1 (MQ=255)
                                                                                                    cgcAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCgga                                                 <  1:7785431/150‑1 (MQ=255)
                                                                                                    cgcAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCgga                                                 >  2:3945743/1‑150 (MQ=255)
                                                                                                    cgcAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCgga                                                 >  1:5674016/1‑150 (MQ=255)
                                                                                                      cAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCggagg                                               <  2:1314832/150‑1 (MQ=255)
                                                                                                        aTAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGaa                                             <  2:2006936/150‑1 (MQ=255)
                                                                                                         tAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAg                                            <  1:2327547/150‑1 (MQ=255)
                                                                                                          aGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGc                                                            >  2:5556335/1‑133 (MQ=255)
                                                                                                          aGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGt                                           >  1:4637970/1‑150 (MQ=255)
                                                                                                          aGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGt                                           <  2:1015448/150‑1 (MQ=255)
                                                                                                            tCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTTCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTgg                                         <  2:4336123/150‑1 (MQ=255)
                                                                                                             ccGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGc                                        <  1:3821947/150‑1 (MQ=255)
                                                                                                              cGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGcc                                       >  2:8242086/1‑150 (MQ=255)
                                                                                                              cGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGcc                                       >  1:1217329/1‑150 (MQ=255)
                                                                                                              cGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGcc                                       >  1:5467858/1‑150 (MQ=255)
                                                                                                               gCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCt                                      >  2:4223877/1‑150 (MQ=255)
                                                                                                               gCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCt                                      >  1:3048191/1‑150 (MQ=255)
                                                                                                                 cAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTg                                    <  2:2319294/150‑1 (MQ=255)
                                                                                                                 cAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTg                                    <  1:6943704/150‑1 (MQ=255)
                                                                                                                 cAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTg                                    >  1:7558028/1‑150 (MQ=255)
                                                                                                                       gCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCtgttg                              <  1:4275159/150‑1 (MQ=255)
                                                                                                                        ccACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCtgttgt                             <  2:8736574/150‑1 (MQ=255)
                                                                                                                        ccACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCtgttgt                             <  1:6829949/150‑1 (MQ=255)
                                                                                                                        ccACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCtgttgt                             >  2:3121455/1‑150 (MQ=255)
                                                                                                                        ccACGCGCCTGGGCAAAACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGGGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTGGCtgttgt                             >  1:8706308/1‑150 (MQ=255)
                                                                                                                         cACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGACGTGGCCTTGCTgttgtt                            >  2:406216/1‑150 (MQ=255)
                                                                                                                          aCGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCTGTTGttt                           >  2:5305119/1‑150 (MQ=255)
                                                                                                                          aCGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCTGTTGttt                           >  2:3279545/1‑150 (MQ=255)
                                                                                                                             cgcCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCTGTTGTttctt                        <  1:8513921/150‑1 (MQ=255)
                                                                                                                              gcCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCTGTTGTttcttc                       <  1:8267370/150‑1 (MQ=255)
                                                                                                                               ccTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCTGTTGTTTCTTCa                      <  1:2864967/150‑1 (MQ=255)
                                                                                                                                cTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCTGTTGTTTCTTCAg                     >  1:1814684/1‑150 (MQ=255)
                                                                                                                                 tGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCTGTTGTTTCTTCAgg                    >  1:7408302/1‑150 (MQ=255)
                                                                                                                                   ggCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCTGTTGTTTCTTCAGGCa                  >  2:1732304/1‑150 (MQ=255)
                                                                                                                                        tACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCTGTTGTTTCTTCAGGCACTTGa             <  1:8071919/150‑1 (MQ=255)
                                                                                                                                        tACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCTGTTGTTTCTTCAGGCACTTGa             <  1:1490929/150‑1 (MQ=255)
                                                                                                                                        agcGCCGGCACACTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCTGTTGTTTCTTCAGGCACTTGa             >  2:4939215/3‑150 (MQ=255)
                                                                                                                                         gcGCCGGCACACTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCTGTTGTTTCTTCAGGCACTTGAg            >  2:3507712/2‑150 (MQ=255)
                                                                                                                                         gcGCCGGCACACTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCGTGCTGTTGTTTCTTCAGGCACTTGAg            >  1:6640409/2‑150 (MQ=255)
                                                                                                                                          cGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACAATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGTCCTTGCTGTTGTTTCTTCAGGCACTTGAgg           <  2:2109852/150‑1 (MQ=255)
                                                                                                                                                 aGTGTGCCGGCGCTGCTACATCCACCCGGTAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCTGTTGTTTCTTCAGGCACTTGAGGAACagga    <  2:5113514/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
CTGCCAAGGACTATCGCACCTGGGCCGGCAGCAGCCTGGCATTGAACCTGCTAAAGCCCTTGGCCTGGGAGCCGGAGAGTGAAGCCAAACGCCAGGTCGCCGCAATAGTCCGCCAGGTAGCCACGCGCCTGGGCAATACGCCGGCAGTGTGCCGGCGCTGCTACATCCACCCGGCAGTTCTGGAGCACTATGCCTTGGGGCGCCTGGCCAATTTGCCGAAAAACCGTGTGCGCAAAGGCCTGGACCCGGAGGAAGTGGCCTTGCTGTTGTTTCTTCAGGCACTTGAGGAACAGGAGG  >  NC_002947/4362343‑4362639

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑