| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,430,132 | G→C | 6.3% | intergenic (‑197/‑603) | PP_5647 ← / → PP_3917 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,430,132 | 0 | G | C | 6.3% | 1118.2 / 46.9 | 332 | intergenic (‑197/‑603) | PP_5647/PP_3917 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (163/148); new base C (8/13); total (171/161) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.61e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.34e-01 | |||||||||||
Only 100 of 340 total aligned reads displayed.
AGATATCCATTTCGCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGCCTTGTTTCTGCGCGCCTC > NC_002947/4429983‑4430278 | agataTCCATTTCGCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAgcg > 2:4342755/1‑150 (MQ=255)agataTCCATTTCGCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAgcg > 1:7556992/1‑150 (MQ=255) tatCCATTTCGCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCgg < 2:1386211/150‑1 (MQ=255) atCCATTTCGCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCggg < 1:1982999/150‑1 (MQ=255) atCCATTTCGCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCggg > 1:8490789/1‑150 (MQ=255) atCCATTTCGCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCggg > 1:4670966/1‑150 (MQ=255) atCCATTTCGCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCggg > 1:631522/1‑150 (MQ=255) tCCATTTCGCTTAAATGCGACCGGTGGAAAATGATCTGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACAGAGCCCGATCACTGAGCACGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCgggg > 2:4639422/1‑150 (MQ=255) tCCATTTCGCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCgggg > 1:133284/1‑150 (MQ=255) tCCATTTCGCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCgggg > 2:4305769/1‑150 (MQ=255) ccATTTCGCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGgggc > 1:3993394/1‑150 (MQ=255) atctCGCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGgggctg < 2:8734278/147‑1 (MQ=255) aTTTCGCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGgggctg < 2:4718256/150‑1 (MQ=255) aTTTCGCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGgggctg < 2:3056604/150‑1 (MQ=255) tCGCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGgggctgggc < 1:2393653/150‑1 (MQ=255) cGCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCCCCgcgctgggct < 2:2645470/150‑1 (MQ=255) cGCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCCCCgcgctgggct < 1:1079479/150‑1 (MQ=255) gCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCtt > 1:5675402/1‑150 (MQ=255) gCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCtt > 1:7150890/1‑150 (MQ=255) gCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCtt < 2:5538524/150‑1 (MQ=255) gCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCtt > 1:338316/1‑150 (MQ=255) gCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCtt > 1:3183460/1‑150 (MQ=255) ttAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTCGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTCGCAAAAAGCCCAGCGCGGGGCTGGGCTTcg > 2:5967149/1‑149 (MQ=255) ttAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCt < 2:4802629/150‑1 (MQ=255) tAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCCCCGCGCTGGGCttttt < 1:8662376/150‑4 (MQ=255) aTGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTca > 2:1677209/1‑150 (MQ=255) ccGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCagag < 1:7913458/150‑1 (MQ=255) gAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGAc > 1:5334622/1‑150 (MQ=255) aaaTGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTa < 2:2328625/150‑1 (MQ=255) aaaTGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTa < 1:6440686/150‑1 (MQ=255) aTGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGa < 1:5545179/150‑1 (MQ=255) tGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGCGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGAc > 2:589281/1‑150 (MQ=255) tCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCa < 2:5183653/150‑1 (MQ=255) ccTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGtt > 1:3016101/1‑150 (MQ=255) cTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTc < 1:4966892/150‑1 (MQ=255) aaTCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCaa < 2:7150890/150‑1 (MQ=255) tGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTg > 2:908974/1‑150 (MQ=255) tGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTg > 2:7936522/1‑150 (MQ=255) atatCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCt > 2:6912387/1‑150 (MQ=255) tCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAATAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACt > 1:3980319/1‑150 (MQ=255) cAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTc < 1:1905914/150‑1 (MQ=255) aGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTcc > 2:1022734/1‑150 (MQ=255) gggACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAAt < 1:7639431/150‑1 (MQ=255) gcCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCtt < 2:7007440/150‑1 (MQ=255) cAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTtgt < 2:5033898/150‑1 (MQ=255) cAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTtgt < 2:4229733/150‑1 (MQ=255) cAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTtgt < 1:3742770/150‑1 (MQ=255) aGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTtgtg < 2:156213/150‑1 (MQ=255) agagAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATa < 1:6679660/150‑1 (MQ=255) gagaACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAg > 1:6972589/1‑150 (MQ=255) gagaACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAg > 1:1446121/1‑150 (MQ=255) gaACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCt > 1:3125935/1‑150 (MQ=255) aaCCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCta < 2:1792219/150‑1 (MQ=255) aCCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGTAGCTACTCCAATGGGCGCTTGTGATAGCtat < 1:6148798/150‑1 (MQ=255) cGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAg < 2:4456921/150‑1 (MQ=255) ccGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTc > 1:2203124/1‑150 (MQ=255) cGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCg < 2:8517177/150‑1 (MQ=255) cGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCg < 1:302806/150‑1 (MQ=255) gATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCgg > 1:7312548/1‑150 (MQ=255) aTCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGc < 1:5172091/150‑1 (MQ=255) aCTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCAtt < 1:2903964/150‑1 (MQ=255) aCTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCAtt < 2:2444952/150‑1 (MQ=255) cTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTg < 2:8015635/150‑1 (MQ=255) cTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTg > 2:3684057/1‑150 (MQ=255) tGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTgg < 2:642505/150‑1 (MQ=255) tGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGATGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACTCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTgg > 1:268498/1‑150 (MQ=255) aGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGAt > 2:5700522/1‑150 (MQ=255) aGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGAt > 2:7396675/1‑150 (MQ=255) gCCCGTCCAGCAGACAGACGTTCACGTCGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCCCTGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATg < 2:8291164/150‑1 (MQ=255) cggTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGcc > 1:4731553/3‑150 (MQ=255) ccGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGcc > 2:7827509/1‑150 (MQ=255) ccGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGcc > 1:5940866/1‑150 (MQ=255) cGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCGGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGccc < 1:1676818/150‑1 (MQ=255) gTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCt < 2:8459628/150‑1 (MQ=255) cagcagACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGa < 2:2825840/150‑1 (MQ=255) agcagACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGAt < 2:3183460/150‑1 (MQ=255) agcagACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGAt > 2:8595375/1‑150 (MQ=255) gcagACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATg > 1:14353/1‑150 (MQ=255) cagacagaAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATgg > 1:3142735/1‑150 (MQ=255) cagacagaAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGATTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTGGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATgg > 1:1149844/1‑150 (MQ=255) agacagaAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATggg > 2:1411321/1‑150 (MQ=255) gacagaAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGt > 1:772867/1‑150 (MQ=255) agaAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCg > 2:335463/1‑150 (MQ=255) gTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTgg < 2:3843494/150‑1 (MQ=255) gTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTgg > 1:5414279/1‑150 (MQ=255) gTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTgg < 1:6529103/150‑1 (MQ=255) ttCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTggg > 1:2571043/1‑150 (MQ=255) tCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGc < 1:959104/150‑1 (MQ=255) aaGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTCTAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGCCt > 2:2144388/1‑150 (MQ=255) acagaaGCCCAGCCCCGCGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGCCTTGTTTc > 2:668237/5‑150 (MQ=255) aaaaaGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGCCTTGTTTCt > 1:6004484/1‑150 (MQ=255) agaaGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCaa > 1:3846974/3‑59 (MQ=255) agaaGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGCCTTGTTTCTg > 2:7639157/3‑150 (MQ=255) agaaGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGCCTTGTTTCTg > 2:8270010/3‑150 (MQ=255) aaGCCCAGCCCCGCGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCtt > 1:4198244/1‑65 (MQ=38) aaGCCCAGCCCCGCGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGCCTTGTTTCTgcg > 2:412846/1‑150 (MQ=255) aGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGCCTTGTTTCTgcgc < 2:1127298/150‑1 (MQ=255) aGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGCCTTGTTTCTgcgc < 1:4525805/150‑1 (MQ=255) aGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGCCTTGTTTCTgcgc < 1:4341737/150‑1 (MQ=255) cAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGCCTTGTTTCTGCGCGCCt > 2:3612826/1‑150 (MQ=255) | AGATATCCATTTCGCTTAAATGCGACCGGTGGAAAATGATCGGCCCTAATCCTTGCTGATAGATATCAGCGGGACAGCGCCAGTAGAGAACCGAGCCCGATCACTGAGCCCGTCCAGCAGACAGAAGTTCAAGTAGCAAAAAGCCCAGCGCGGGGCTGGGCTTCTGTCAGCAGAGCTCGACTAGACTCAGCGTTCAATTACGCTTGGCAGCTACTCCAATGGGCGCTTGTGATAGCTATAGCGCTCGGCATTGGATGCCCTCGATGGGTCCGGTGGGCCTTGTTTCTGCGCGCCTC > NC_002947/4429983‑4430278 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |