| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,435,079 | A→C | 6.5% | intergenic (+39/‑145) | PP_3924 → / → PP_3925 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,435,079 | 0 | A | C | 6.5% | 1019.6 / 38.9 | 304 | intergenic (+39/‑145) | PP_3924/PP_3925 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (115/169); new base C (5/15); total (120/184) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.37e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 308 total aligned reads displayed.
GGTATCGTAAGCGGCGAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGAAGACGCATGA > NC_002947/4434930‑4435227 | ggTATCGTAAGCGGCGAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGa < 2:7483265/150‑1 (MQ=255) tATCGTAAGCGGCGAAACCGTCGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGTAATACCGGATGATCGAAAAACCGAAGCCTGACg < 1:4614359/150‑1 (MQ=255) gTAAGCGGCGAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCtt < 2:6975138/150‑1 (MQ=255) gTAAGCGGCGAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCtt > 1:3057010/1‑150 (MQ=255) tAAGCGGCGAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTc < 1:3781735/150‑1 (MQ=255) tAAGCGGCGAAACCGACGGCATGCAGGCCTTCATGGGGGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTc < 2:6384810/150‑1 (MQ=255) aaGCGGCGAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCg < 2:7658515/150‑1 (MQ=255) aGCGGCGAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCgg < 2:6567701/150‑1 (MQ=255) aGCGGCGAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCGTCAGGCTTCgg < 1:4209344/150‑1 (MQ=255) gcggcgAAACCGACGGCATGCAGGCCTTCATGGGTGGCGAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGACGATCAAAAAACCGAAGCCTGACGGCTTCGGt < 2:3861782/150‑1 (MQ=255) gcggagAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGt < 1:7430039/150‑1 (MQ=255) cggcgAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGtt > 2:7835410/1‑150 (MQ=255) ggcgAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGttt < 1:1491859/150‑1 (MQ=255) gcgAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGtttt < 1:5086776/150‑1 (MQ=255) aaaCCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGttttttt < 2:1940011/150‑1 (MQ=255) aaaCCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGttttttt > 2:5398813/1‑150 (MQ=255) aaCCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGtttttttt < 2:3276671/150‑1 (MQ=255) aCCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTg > 1:5157431/1‑150 (MQ=255) ccGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGc > 1:1855500/1‑150 (MQ=255) cGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCtt > 2:2593077/1‑136 (MQ=255) cGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTg < 1:5560635/150‑1 (MQ=255) gCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCa < 2:5311600/150‑1 (MQ=255) cATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCAt > 2:2764122/1‑150 (MQ=255) aTGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCAtt < 2:2362268/150‑1 (MQ=255) gCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCg < 2:4339975/150‑1 (MQ=255) gCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCCGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCg < 1:3451873/150‑1 (MQ=255) cAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCgg > 2:1047225/1‑150 (MQ=255) cAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCgg < 1:7641530/150‑1 (MQ=255) aGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGt > 1:2317452/1‑150 (MQ=255) aGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGt > 1:8181488/1‑150 (MQ=255) aGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGt < 2:171177/150‑1 (MQ=255) ccTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCa < 2:316117/150‑1 (MQ=255) ttCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGt < 1:2686300/150‑1 (MQ=255) tCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTg > 2:3794533/1‑150 (MQ=255) cgggCGGCACGCTGCGGGTCGCAGGCGCCATGATGCTGCCGACGACACTCAGCGAGCTGGTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAACCCGACGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATc < 2:6642136/149‑1 (MQ=255) tGGCAAGCGGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATccacc < 2:1868279/150‑1 (MQ=255) cAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGc < 2:1136945/150‑1 (MQ=255) gCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAac > 1:6994521/1‑150 (MQ=255) tGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAacac < 1:7958595/150‑1 (MQ=255) tGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAacac > 1:6005567/1‑150 (MQ=255) tGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCCGCATTCGGTGCAGTGATCCACCAGCAacac > 1:4296484/1‑150 (MQ=255) gggTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCt < 1:1641530/150‑1 (MQ=255) ttGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCAc > 2:8084282/1‑150 (MQ=255) aGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTAt > 2:8236298/1‑150 (MQ=255) aGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCGTCAGGCTTCGGtttt < 1:6503430/101‑1 (MQ=38) ggCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTAtt < 1:2426435/150‑1 (MQ=255) ggCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCAACCAGCAACACCCTCACCAAtt > 2:7047123/1‑150 (MQ=255) cGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTg < 2:8583716/150‑1 (MQ=255) gACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTgg > 1:6091072/1‑150 (MQ=255) atgCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATg < 1:4113382/150‑1 (MQ=255) tgCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATgg > 1:3608752/1‑150 (MQ=255) gCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATggg < 2:7399342/150‑1 (MQ=255) cTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGa < 1:7483808/150‑1 (MQ=255) gATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGAtt > 1:825565/1‑150 (MQ=255) tGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGt < 1:8438439/150‑1 (MQ=255) aaaCTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTc > 1:5023177/1‑150 (MQ=255) aCTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCa > 1:1877174/1‑150 (MQ=255) cGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTTCCCAGCAATAGGTGCAGTGATACAACACCAACACCCAAAACAATTTTGCAAAATGGACCATTTTTGCAAaccag > 2:162316/1‑148 (MQ=255) cGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTg > 1:3944723/1‑150 (MQ=255) aGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGc < 2:8716036/150‑1 (MQ=255) aGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGc > 1:3011076/1‑150 (MQ=255) aGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGc < 1:8061184/150‑1 (MQ=255) gCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCg < 1:1093906/150‑1 (MQ=255) gCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCg < 2:456052/150‑1 (MQ=255) tGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGa < 1:6145843/150‑1 (MQ=255) gTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGAc < 2:1169607/150‑1 (MQ=255) ttCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGAcc > 1:2810880/1‑150 (MQ=255) tCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCa < 2:5024526/150‑1 (MQ=255) tCCCGTCCTGAGGGCTGGGAAGACCGGATGCTCGACAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCggtgca < 2:8446889/150‑5 (MQ=255) ccGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAGCCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCAtt > 1:5487879/1‑150 (MQ=255) ccGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCAtt > 2:8133744/1‑150 (MQ=255) ccGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCAtt > 2:559013/1‑150 (MQ=255) cGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTa > 1:4017902/1‑150 (MQ=255) gAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTAc > 1:7227697/1‑150 (MQ=255) ggCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCAACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCa > 2:147393/1‑150 (MQ=255) gCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCaa > 1:2553694/1‑150 (MQ=255) cTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAAt > 2:3602556/1‑150 (MQ=255) tGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATa < 1:1897533/150‑1 (MQ=255) tGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATa < 1:1218754/150‑1 (MQ=255) tGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATa < 2:775700/150‑1 (MQ=255) tGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATa < 2:2025311/150‑1 (MQ=255) gAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTa > 2:7146146/1‑150 (MQ=255) aCCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTg < 2:6699353/150‑1 (MQ=255) aCCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTg < 1:7827976/150‑1 (MQ=255) ccGGATTATCGTAAAACCGAATCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGc < 1:205796/150‑1 (MQ=255) gatCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCga < 2:1384854/150‑1 (MQ=255) tCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCgaga > 1:5792958/1‑150 (MQ=255) tCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCgaga > 2:3477851/1‑150 (MQ=255) aaaaCCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATaa < 1:5317653/150‑1 (MQ=255) aaaaCCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATaa < 1:5398813/150‑1 (MQ=255) aaaaCCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATaa < 2:1529760/150‑1 (MQ=255) aaaCCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAg < 2:447742/49‑1 (MQ=255) aaaCCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAg < 1:3259954/150‑1 (MQ=255) aaCCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAgg < 2:5157431/150‑1 (MQ=255) aCCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGa > 1:6716597/1‑150 (MQ=255) aCCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGa < 2:8654635/150‑1 (MQ=255) gAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCGACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGAAGa < 2:7246943/150‑1 (MQ=255) gAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGAAGa < 2:3057010/150‑1 (MQ=255) gCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGAAGACGc < 2:4017902/150‑1 (MQ=255) tGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGAAGACGCATg > 1:8763111/1‑150 (MQ=255) | GGTATCGTAAGCGGCGAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGAAGACGCATGA > NC_002947/4434930‑4435227 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |