Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 4,612,400 A→C 5.0% R26S (AGA→AGC)  PP_4079 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,612,4000AC 5.0% 1239.5 / 36.6 357R26S (AGA→AGC) PP_4079hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (184/155);  new base C (6/12);  total (190/167)
Fisher's exact test for biased strand distribution p-value = 9.39e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.51e-01

Only 100 of 371 total aligned reads displayed.

CCTGGGCTGGACCAGCTTCGTCGATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATCCCTGAGAGCATCCTGGA  >  NC_002947/4612251‑4612549
                                                                                                                                                     |                                                                                                                                                     
ccTGGGCTGGACCAGCTTCGTCGATGACCACGATGGCCAAATCAGTCCCGTTGTGCGCTTCCGGGGGCGGTCTTGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCaga                                                                                                                                                       <  1:2178118/150‑1 (MQ=255)
ccTGGGCTGGACCAGCTTCGTCGATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCaga                                                                                                                                                       <  2:4341135/150‑1 (MQ=255)
 cTGGGCTGGACCAGCTTCGTCGATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCagag                                                                                                                                                      >  2:7075063/1‑150 (MQ=255)
  tGGGCTGGACCAGCTTCGTCGATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGc                                                                                                                                                     <  2:2664369/150‑1 (MQ=255)
           ccAGCTTCGTCGATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGt                                                                                                                                            >  2:2336607/1‑150 (MQ=255)
                ttCGTCGATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGgcgc                                                                                                                                       >  2:8369474/1‑150 (MQ=255)
                 tcgtcgATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGCGCCACCTTGGTGGctct                                                                                                                                      <  2:1475743/150‑1 (MQ=255)
                  cgtcgATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGCGCCACCTTGGTGGCTCTg                                                                                                                                     <  2:3520700/150‑1 (MQ=255)
                  cgtcgATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCTTGGTGGCTCTg                                                                                                                                     <  1:1973509/150‑1 (MQ=255)
                  cgtcgATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCTTGGTGGCTCTg                                                                                                                                     <  1:1973754/150‑1 (MQ=255)
                  cgtcgATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTg                                                                                                                                     <  1:1220470/150‑1 (MQ=255)
                  cgtcgATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTg                                                                                                                                     <  2:6343989/150‑1 (MQ=255)
                   gtcgATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTgg                                                                                                                                    <  1:4072236/150‑1 (MQ=255)
                    tcgATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGa                                                                                                                                   <  1:3731853/150‑1 (MQ=255)
                    tcgATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGa                                                                                                                                   >  1:4278158/1‑150 (MQ=255)
                    tcgATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGa                                                                                                                                   >  2:3377793/1‑150 (MQ=255)
                     cgATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGAc                                                                                                                                  <  1:2577718/150‑1 (MQ=255)
                     cgATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGAc                                                                                                                                  <  2:1400590/150‑1 (MQ=255)
                       ctGACCACGATGGCCAAATCAGTCCCATTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGCGCCACCTTGGTGGCTCTgctcaa                                                                                                                                <  2:8012993/149‑6 (MQ=255)
                       aTGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGCGCCACCTTGGTGGCTCTgctcaa                                                                                                                                <  1:543999/150‑6 (MQ=255)
                           ccACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCg                                                                                                                            >  2:4058217/1‑150 (MQ=255)
                            cACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGt                                                                                                                           >  2:7581226/1‑150 (MQ=255)
                            cACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGt                                                                                                                           >  2:6138311/1‑150 (MQ=255)
                            cACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGt                                                                                                                           >  2:5133886/1‑150 (MQ=255)
                            cACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGt                                                                                                                           >  2:2859181/1‑150 (MQ=255)
                             aCGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGtt                                                                                                                          <  1:816992/150‑1 (MQ=255)
                                    ccAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATc                                                                                                                   >  2:6781326/1‑150 (MQ=255)
                                               ccGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCaa                                                                                                        <  2:5697309/150‑1 (MQ=255)
                                                cGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAg                                                                                                       <  1:8329030/150‑1 (MQ=255)
                                                cGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAg                                                                                                       >  2:2243258/1‑150 (MQ=255)
                                                cGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAg                                                                                                       >  2:1264117/1‑150 (MQ=255)
                                                cGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAg                                                                                                       >  2:196405/1‑150 (MQ=255)
                                                     tCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGAcaa                                                                                                  >  1:3670057/1‑150 (MQ=255)
                                                        gCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGgccgcc                                                                                                           <  2:7924758/138‑1 (MQ=255)
                                                        gCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGAcaaccc                                                                                               >  2:907799/1‑150 (MQ=255)
                                                           tCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGAcaacccaac                                                                                            <  1:7533880/150‑1 (MQ=255)
                                                             cGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACaacccaaccc                                                                                          <  2:6655180/150‑1 (MQ=255)
                                                               ccctgagTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAAcccaacccaa                                                                                        <  1:4479471/144‑1 (MQ=255)
                                                                gggCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAg                                                                                       <  1:6183486/150‑1 (MQ=255)
                                                                    ggTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTcgc                                                                                   >  2:2966587/1‑150 (MQ=255)
                                                                    ggTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTcgc                                                                                   <  1:1364441/150‑1 (MQ=255)
                                                                     gTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTcgcg                                                                                  >  1:7111806/1‑150 (MQ=255)
                                                                      tCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGt                                                                                 >  2:8634897/1‑150 (MQ=255)
                                                                       cATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCACGTCGCGtt                                                                                >  2:7782052/1‑150 (MQ=255)
                                                                        aTGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTc                                                                               >  1:2365817/1‑150 (MQ=255)
                                                                          gAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAg                                                                             <  2:5906429/150‑1 (MQ=255)
                                                                           aGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGc                                                                            <  2:3863682/150‑1 (MQ=255)
                                                                             ccgccTGGCAGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCAt                                                                          <  1:5260588/150‑1 (MQ=255)
                                                                                ccTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCaa                                                                       <  1:1465155/150‑1 (MQ=255)
                                                                                ccTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCaa                                                                       <  1:5195909/150‑1 (MQ=255)
                                                                                     ccGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCACGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCa                                                                  <  2:6037655/150‑1 (MQ=255)
                                                                                          tGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCa                                                             >  1:784556/1‑150 (MQ=255)
                                                                                          tGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCCTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCa                                                             >  1:463769/1‑150 (MQ=255)
                                                                                           ggATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCaa                                                            <  2:3960120/150‑1 (MQ=255)
                                                                                            gATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAAc                                                           >  1:2410594/1‑150 (MQ=255)
                                                                                            gATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAAc                                                           >  1:4371239/1‑150 (MQ=255)
                                                                                             aTTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACg                                                          <  2:4322281/150‑1 (MQ=255)
                                                                                               tGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCACCCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCt                                                        >  2:3748680/1‑150 (MQ=255)
                                                                                                  gcCTCTGCAGCTCTAGCTGGTCGGACTGCCAGTTTGCACGTCCTTCAGCATAGCCACCAACCTGGCGAAGGACCACTATTTACCAATCGGGCCGCCCAAGGACAACCCAACAAAAGTCTCGAACAGCAACAACTACAGCCCAACTCTCaa                                                     >  1:8659870/1‑150 (MQ=255)
                                                                                                     tctGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAg                                                  >  1:6974390/1‑150 (MQ=255)
                                                                                                     tctGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAg                                                  >  2:6807328/1‑150 (MQ=255)
                                                                                                         ctggtcgtgctggtcgGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAAc                                              >  1:1732013/1‑150 (MQ=255)
                                                                                                            gtcgtgctggtcgGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCg                                           <  2:8504372/150‑1 (MQ=255)
                                                                                                            gtcgtgctggtcgGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCg                                           <  1:8699417/150‑1 (MQ=255)
                                                                                                                  ctggtcgGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAgt                                     <  1:734407/150‑1 (MQ=255)
                                                                                                                   tggtcgGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAgtg                                    >  2:5681349/1‑150 (MQ=255)
                                                                                                                     gtcgGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCa                                                                              <  2:4636776/106‑1 (MQ=255)
                                                                                                                     gtcgGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTc                                  >  1:150131/1‑150 (MQ=255)
                                                                                                                     gtcgGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTc                                  <  2:5408421/150‑1 (MQ=255)
                                                                                                                     gtcgGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTc                                  <  1:3377793/150‑1 (MQ=255)
                                                                                                                      tcgGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCg                                 >  2:7845998/1‑150 (MQ=255)
                                                                                                                       cgGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGa                                >  2:7340487/1‑150 (MQ=255)
                                                                                                                       cgGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGa                                <  2:48843/150‑1 (MQ=255)
                                                                                                                       cgGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGa                                >  2:1772741/1‑150 (MQ=255)
                                                                                                                        ggACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGAc                               <  1:8483631/150‑1 (MQ=255)
                                                                                                                            tGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTgg                           >  1:5905006/1‑150 (MQ=255)
                                                                                                                              ccAGGTTGCACGTCCTTGAGCAGATACACCAAGGTGTCGCTGGACAACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACCATCAACAGCAACCCGAACACGGTCGACgagtcg                         >  1:2884487/1‑145 (MQ=255)
                                                                                                                              ccAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTggcg                         >  2:8141197/1‑150 (MQ=255)
                                                                                                                              ccAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTggcg                         >  1:4743086/1‑150 (MQ=255)
                                                                                                                               cAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTggcgg                        <  1:658811/150‑1 (MQ=255)
                                                                                                                                aGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTggcggc                       >  1:1097705/1‑150 (MQ=255)
                                                                                                                                  gTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCa                     >  2:6688244/1‑150 (MQ=255)
                                                                                                                                  gTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCa                     >  1:3478943/1‑150 (MQ=255)
                                                                                                                                  gTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCa                     >  2:5564002/1‑150 (MQ=255)
                                                                                                                                  gTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAACATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCa                     >  1:7465962/1‑150 (MQ=255)
                                                                                                                                    tGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATc                   <  2:5040142/150‑1 (MQ=255)
                                                                                                                                       aCGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATCCCt                >  1:458377/1‑150 (MQ=255)
                                                                                                                                         gTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATCCCTga              <  1:3150245/150‑1 (MQ=255)
                                                                                                                                         gTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATCCCTga              >  2:1497628/1‑150 (MQ=255)
                                                                                                                                         gTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATCCCTga              <  2:3185904/150‑1 (MQ=255)
                                                                                                                                         gTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATCCCTga              >  1:8548231/1‑150 (MQ=255)
                                                                                                                                         gTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATCCCTga              >  2:8714175/1‑150 (MQ=255)
                                                                                                                                         gTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATCCCTga              <  2:2164291/150‑1 (MQ=255)
                                                                                                                                          tCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATCCCTgag             >  1:2739711/1‑150 (MQ=255)
                                                                                                                                            cTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATCCCTGagag           >  1:5640151/1‑150 (MQ=255)
                                                                                                                                             ttGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATCCCTGAGAGc          >  1:3986500/1‑150 (MQ=255)
                                                                                                                                                tccAGCGCCACCTTGGTGGCTCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATCCCTGAGAGCATc       >  1:688617/3‑150 (MQ=255)
                                                                                                                                                 ccAGCGCCACCTTGGTGGCTCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATCCCTGAGAGCATcc      >  1:8025162/2‑150 (MQ=255)
                                                                                                                                                   agagCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATCCCTGAGAGCATCCTg    >  2:5469221/1‑150 (MQ=255)
                                                                                                                                                     agCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATCCCTGAGAGCATCCTGGa  >  2:6885908/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CCTGGGCTGGACCAGCTTCGTCGATGACCACGATGGCCAAATCAGTCCCGTTGTCCGCTTCCGGGGGCGGTCATGAGCCGCCTGGCCGTCTGGATTGCGCCTCTGCTGGTCGTGCTGGTCGGACTGCCAGGTTGCACGTCCTTGAGCAGAGCCACCAAGGTGGCGCTGGACCACTCGTTACCAATCGGGCCGCCCAAGGACAACCCAACCCAAGTCGCGTTCAGCATCAACGTCAGCCCAACGCTCAACAGCAACCCGAACAGTGTCGACGTGGCGGCCATCCCTGAGAGCATCCTGGA  >  NC_002947/4612251‑4612549

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑