Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 4,680,340 C→T 5.5% intergenic (+44/+60) PP_4137 → / ← chrR outer membrane siderophore receptor/chromate reductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,680,3400CT 5.5% 548.2 / 14.6 182intergenic (+44/+60)PP_4137/chrRouter membrane siderophore receptor/chromate reductase
Reads supporting (aligned to +/- strand):  ref base C (47/124);  new base T (5/5);  total (52/130)
Fisher's exact test for biased strand distribution p-value = 1.53e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.03e-01

Only 100 of 187 total aligned reads displayed.

AGCGACCGTGACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGA  >  NC_002947/4680191‑4680489
                                                                                                                                                       |                                                                                                                                                        
aGCGACCGTGACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGcc                                                                                                                                                          <  2:1663974/150‑1 (MQ=255)
   gACCGTGACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGAc                                                                                                                                                       <  1:4201108/150‑1 (MQ=255)
   gACCGTGACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGAc                                                                                                                                                       <  1:3421818/150‑1 (MQ=255)
         gACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTc                                                                                                                                                 <  1:7839826/150‑1 (MQ=255)
           cGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTcg‑c                                                                                                                                              <  1:1756140/150‑1 (MQ=255)
           cGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTcg‑c                                                                                                                                              <  2:1485920/150‑1 (MQ=255)
           cGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTcg‑c                                                                                                                                              <  2:3459686/150‑1 (MQ=255)
            gCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTcg‑cg                                                                                                                                             <  1:1336010/150‑1 (MQ=255)
             ccGGCCTCCAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTGTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑GGCAAATTCAATGACGCATTCG‑Cgg                                                                                                                                            <  2:8183812/150‑1 (MQ=37)
             ccGGCCTACACCGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑Cgg                                                                                                                                            <  1:5849803/150‑1 (MQ=255)
             ccGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑GGCAAATTCAATGACGCATTCG‑Cgg                                                                                                                                            <  1:4280763/150‑1 (MQ=37)
             ccGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑GGCAAATTCAATGACGCATTCG‑Cgg                                                                                                                                            <  1:3471711/150‑1 (MQ=37)
             ccGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑Cgg                                                                                                                                            <  1:5538711/150‑1 (MQ=255)
             ccGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑Cgg                                                                                                                                            <  1:8065944/150‑1 (MQ=255)
             ccGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑Cgg                                                                                                                                            <  1:4071002/150‑1 (MQ=255)
             ccGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑Cgg                                                                                                                                            <  2:3087028/150‑1 (MQ=255)
             ccGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑Cgg                                                                                                                                            <  2:8013172/150‑1 (MQ=255)
             ccGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑Cgg                                                                                                                                            <  1:3634901/150‑1 (MQ=255)
             ccGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑Cgg                                                                                                                                            <  2:8350510/150‑1 (MQ=255)
             ccGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑Cgg                                                                                                                                            <  2:554686/150‑1 (MQ=255)
             ccGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑Cgg                                                                                                                                            <  1:2319209/150‑1 (MQ=255)
             ccGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑Cgg                                                                                                                                            <  1:8726271/150‑1 (MQ=255)
             ccGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCATC‑ATTGAATTTGCCGACGCATTCG‑Cgg                                                                                                                                            <  2:3687124/150‑1 (MQ=255)
             ccGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGAGC‑GGGTTTACCCGCGAATGCGTC‑GGCAAATTCAATGACGCATTCG‑Cgg                                                                                                                                            <  2:2101228/150‑1 (MQ=37)
              cGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑Cggg                                                                                                                                           <  1:2213757/150‑1 (MQ=255)
                gCCTACAACGACGCCGGCCAGGACAAGGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑Ta                                                                                                                                        <  1:6645408/150‑1 (MQ=255)
                  cTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑Taaa                                                                                                                                      <  1:5205623/150‑1 (MQ=255)
                   tACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAAc                                                                                                                                     <  1:1038610/150‑1 (MQ=255)
                   tACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAAc                                                                                                                                     <  1:2772928/150‑1 (MQ=255)
                      aaCGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGGTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTcg‑cg                                                                                                                                             >  2:42601/1‑140 (MQ=255)
                      aaCGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTcg‑cg                                                                                                                                             <  1:42601/140‑1 (MQ=255)
                      aaCGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGGTTACCCCCGCAATCGTCAATTAAATTTGCC‑ACGCAATAGCCGGG‑TAAAacc                                                                                                                                   >  2:2430242/1‑150 (MQ=255)
                      aaCGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGGTTAACCGCGAATGCGTC‑ATTTTATTTTCCGACGCAATAG‑CGGG‑TAAAcccc                                                                                                                                  >  2:5454669/1‑149 (MQ=255)
                            gCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGcc                                                                                                                                                          <  1:8819852/122‑1 (MQ=255)
                                  cAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGGTTAACCGCGAATGCGTC‑ATTGAAATTTCCGTCGCAATCG‑CGGG‑TTAACCCCCTCCTACACA‑gg                                                                                                                     >  2:7048521/1‑150 (MQ=255)
                                    ggACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑gggg                                                                                                                   <  2:7066141/150‑1 (MQ=255)
                                         aggCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTTTGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTg                                                                                                              <  2:6393974/148‑1 (MQ=255)
                                          tGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGc                                                                                                                                                     >  2:1987604/1‑113 (MQ=255)
                                          tGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGc                                                                                                                                                     <  1:1987604/113‑1 (MQ=255)
                                                ttCGACACCGGGCGCCGGATTGGGCGGGTAGGCGGGGGTTTCCTACCGCTTCCGCGGCCGGGTGGGCGC‑GGGTTTACCCGCGACTGCGTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCAcagca                                                                                                       <  2:5229356/150‑1 (MQ=37)
                                                ttCGACACCGGGCGACGGATTGGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCAcagca                                                                                                       <  2:6153550/150‑1 (MQ=255)
                                                  cGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAgg                                                                                                     <  2:4227232/150‑1 (MQ=255)
                                                     cacCGGGCGAAGGTTTTGGCGTGTATGCCGGGGTTTCCTACCGCTCCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGAtt                                                                                                  <  1:7260973/150‑1 (MQ=255)
                                                        cGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGCGGGGTTTACCGCCAATTGGGGC‑ATTTAATTTGCC‑ACCCAGTAG‑CGGG‑TTAAAACCCGCCAACAAACGGGGGGTTG‑ACAGCCGGATTAgg                                                                                               >  1:5742729/1‑150 (MQ=255)
                                                         gggCGACGGATTTGGCGTGTTTGCCGGGGTTTCCTACCGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAggg                                                                                              <  2:8211527/150‑1 (MQ=255)
                                                                ggATTGGGCGTGTATGCCGGGGTTTCCTACCGCGTCCGCTGCCGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGa                                                                                       <  2:5917348/150‑1 (MQ=255)
                                                                  aTTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGGTTTCCCGCGAAATCGGC‑ATTGAAATTTGCGTCGCAATCG‑CGGG‑GTAACCCCCACCAACACA‑CGGGCGGTGGACAGGGGGATTGTGGGTTCAGaac                                                                                     >  2:1211387/1‑148 (MQ=255)
                                                                  aTTTGGCGTGTATGCCGGGGTTTCCTACACCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGAcc                                                                                     <  2:637561/150‑1 (MQ=255)
                                                                         gtttttGCGGGGTTTTCCTACTGCTTCCGCTGCGGGGTGGGCGG‑GGTTTTCCCCGCTAATGCGTC‑ATTTAATTTGCCGACCCTTTCG‑GGGT‑AAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGt                                                                              <  1:1561626/145‑1 (MQ=255)
                                                                         gtgtATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGt                                                                              <  2:7765557/150‑1 (MQ=255)
                                                                          tgtATGCCGGGGTTTCCTCCCGCGTCCGCTGACGGGTGGGCGG‑GGGTTTCCCCGCGAATGCGTC‑ATTGAATTTGCCGACGCTTTCG‑CGGT‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGtt                                                                             <  1:7087584/150‑1 (MQ=255)
                                                                             ttGCGGGGGTTTCCTACCGCTTCCGCTGACGGGTGGGCGC‑GGTTTTACCCGCGAATGCGTC‑TTTTAATTTGCCGACGCATTGG‑CGGT‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCaa                                                                          <  1:6150391/149‑1 (MQ=255)
                                                                                  ggggTTTCCTACCGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCa                                                                     <  2:2055528/150‑1 (MQ=255)
                                                                                  ggggTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGGTTACCCCCCCATTCGTC‑AGTGAATTTTCCGACGCCTTCG‑CGGG‑GGAACCCCCACCAACACC‑CGGGCGGTGCCCAGCACGCGTAGGGGGTCAGACCGCCCAGGTCAACATCa                                                                     >  2:5362093/1‑150 (MQ=255)
                                                                                  ggggTTTCCAACAGCTACCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCTTA‑ATTTAATTTGCCCACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCa                                                                     <  2:2116805/150‑1 (MQ=38)
                                                                                       ttCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCAt                                                                <  2:6604528/150‑1 (MQ=255)
                                                                                         ccTCCAGCTGCCGCTGACGGGGGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCTTTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGa                                                              <  2:6166763/150‑1 (MQ=255)
                                                                                          cTACCGCTGCGGCTGAGGGGTGGGGGG‑GGGTTTACCCGCGAATGGGTA‑ATTTATTTTGCCGACGCTTGCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGGTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGAc                                                             <  1:3278599/150‑1 (MQ=255)
                                                                                           tACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTTCCCGCCAAAGCGTC‑ATTGAATTTGGCGACGCAATCG‑CGGG‑TAAACCCCCGCCGAAACA‑GGGGCGTTTCAAAGCAGGATTTTGGGTTCAGACCGCCCAGTTCAAAATAACCCAAGACg                                                            >  2:732358/1‑150 (MQ=255)
                                                                                                 ttCCGCTGACGGGTGGGCGC‑GGGTTTTACCCCCAAAGCGTC‑AATGAATTTGCCGAACCAATCG‑CGGG‑TAAAACCCCTCCAAAACA‑CGGGCGGTGCACAGCAGGCTTAGGGGGTCAGACCCCCCTGTTCAACATGACCCAGGTCGCAAAcc                                                      >  2:8050397/1‑150 (MQ=255)
                                                                                                    cGCTGCCGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGt                                                   <  2:6696383/150‑1 (MQ=255)
                                                                                                    cGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGt                                                   <  2:6237838/150‑1 (MQ=255)
                                                                                                     ggtGAGGGGTGGGCGC‑GGTTTTACCCGCGAATGCGTA‑ATTTAATTTGCCGAGGCATTCG‑GGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTc                                                  <  1:3755614/148‑1 (MQ=255)
                                                                                                     gctgcggggTGGGCGC‑GGGTTTACCCGGGATTGCGTA‑ATTTATTTTGCCGACGATTTCG‑GGGT‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTc                                                  <  1:8411970/144‑1 (MQ=255)
                                                                                                     gCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCTTTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTc                                                  <  2:3851102/150‑1 (MQ=255)
                                                                                                     gCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTc                                                  <  2:4361415/150‑1 (MQ=255)
                                                                                                     gCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTc                                                  <  2:4555573/150‑1 (MQ=255)
                                                                                                        gACGGGTGGGCGC‑GGGTTTACCCGCTAATGCGTC‑ATTTAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGAc                                               <  1:6600995/150‑1 (MQ=255)
                                                                                                          cGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑GGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACaa                                             <  1:676733/150‑1 (MQ=255)
                                                                                                                ggCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCt                                       <  1:8733652/150‑1 (MQ=255)
                                                                                                                  cgc‑gGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGc                                     >  1:1238720/1‑150 (MQ=255)
                                                                                                                   gc‑gGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCa                                    >  2:7531977/1‑150 (MQ=255)
                                                                                                                   gc‑gGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCa                                    <  2:3291998/150‑1 (MQ=255)
                                                                                                                         tttACCCGCTAATGTGTC‑TTTTATTTTGCC‑TCGGATTTG‑GGGGTTAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAAc                               <  1:5939692/150‑1 (MQ=255)
                                                                                                                         tttACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAAc                               <  2:8672322/150‑1 (MQ=255)
                                                                                                                         tttACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAAc                               >  1:4397308/1‑150 (MQ=255)
                                                                                                                             cccGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTc                           <  2:3923091/150‑1 (MQ=255)
                                                                                                                              ccGCGAATGCGTC‑GGCAAATTCAATGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTcg                          >  2:893071/1‑150 (MQ=37)
                                                                                                                              ccGCGAATGCGTC‑GGCAAATTCAATGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTcg                          >  2:292972/1‑150 (MQ=37)
                                                                                                                              ccGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTcg                          >  1:4983825/1‑150 (MQ=255)
                                                                                                                              ccGCGAATGCGTC‑AGTGAATTTGCCGACGCAGTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGATGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGCACGGTcg                          >  2:5759685/1‑150 (MQ=255)
                                                                                                                               cgcgAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAATGGTcgc                         <  2:8751894/150‑1 (MQ=255)
                                                                                                                               cgcgAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTcgc                         <  1:893816/150‑1 (MQ=255)
                                                                                                                               cgcgAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTcgc                         <  2:68523/150‑1 (MQ=255)
                                                                                                                               cgcgAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTcgc                         <  1:579121/150‑1 (MQ=255)
                                                                                                                                gcgAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTcgcg                        >  1:3662352/1‑150 (MQ=255)
                                                                                                                                  gAATGCGTA‑ATTGATTTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTc                      <  2:6302005/150‑1 (MQ=255)
                                                                                                                                        gTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCa                >  1:1413001/1‑150 (MQ=255)
                                                                                                                                         tC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCAt               >  1:8142663/1‑150 (MQ=255)
                                                                                                                                          c‑ATTTATTTTGCCCACCCTTGGG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCAtt              <  1:2538497/150‑1 (MQ=255)
                                                                                                                                          c‑ATTGATTTTGCCGCCGCATTCG‑GGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCAtt              <  1:3048634/150‑1 (MQ=255)
                                                                                                                                          c‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCAtt              <  2:5169565/150‑1 (MQ=255)
                                                                                                                                          c‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCAtt              <  2:5752154/150‑1 (MQ=255)
                                                                                                                                            aTTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTg             <  2:1030229/150‑1 (MQ=255)
                                                                                                                                             ttGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGa            >  1:3789830/1‑150 (MQ=255)
                                                                                                                                             ttGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGa            >  2:6028113/1‑150 (MQ=255)
                                                                                                                                             ttGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGa            >  2:4672283/1‑150 (MQ=255)
                                                                                                                                               gAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGc          >  1:2939751/1‑150 (MQ=255)
                                                                                                                                               gAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGc          <  1:6939526/150‑1 (MQ=255)
                                                                                                                                                       cGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGa  >  1:7340626/1‑150 (MQ=255)
                                                                                                                                                       |                                                                                                                                                        
AGCGACCGTGACGCCGGCCTACAACGACGCCGGCCAGGACAATGCCCGTTCGACACCGGGCGAAGGATTTGGCGTGTATGCCGGGGTTTCCTACAGCTTCCGCTGACGGGTGGGCGC‑GGGTTTACCCGCGAATGCGTC‑ATTGAATTTGCCGACGCATTCG‑CGGG‑TAAACCCGCTCCTACACA‑GGGGCGTTGCACAGCAGGATTAGGGGTTCAGACCGCCCTGTTCAACTTCACCCATGACGCAAACCTGTCGACAAACGCCTGCAAGAACGGTCGCGTCTTGTCATTGAGCTTGCCCGA  >  NC_002947/4680191‑4680489

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑